RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 TRAV9-1A0A075B6T8 112 aa13.57□□□□□ -0.24
SCARB1-206ENST00000539320 M0QXV9 152 aa13.57□□□□□ -0.24
SCARB1-206ENST00000539320 PRSS2P07478 247 aa13.57□□□□□ -0.24
SCARB1-206ENST00000539320 G0S2P27469 103 aa13.57□□□□□ -0.24
SCARB1-206ENST00000539320 KIAA1644Q3SXP7 199 aa13.57□□□□□ -0.24
SCARB1-206ENST00000539320 TIMM17AQ99595 171 aa13.57□□□□□ -0.24
SCARB1-206ENST00000539320 TOMM7Q9P0U1 55 aa13.57□□□□□ -0.24
SCARB1-206ENST00000539320 IGLV7-43P04211 117 aa13.56□□□□□ -0.24
SCARB1-206ENST00000539320 KRTAP11-1Q8IUC1 163 aa13.56□□□□□ -0.24
SCARB1-206ENST00000539320 YPEL4Q96NS1 127 aa13.56□□□□□ -0.24
SCARB1-206ENST00000539320 HERVK_113P63121 156 aa13.55□□□□□ -0.24
SCARB1-206ENST00000539320 SEC11AP67812 179 aa13.55□□□□□ -0.24
SCARB1-206ENST00000539320 KRTAP7-1Q8IUC3 87 aa13.55□□□□□ -0.24
SCARB1-206ENST00000539320 Q8IZM0 81 aa13.55□□□□□ -0.24
SCARB1-206ENST00000539320 TOMM6Q96B49 74 aa13.55□□□□□ -0.24
SCARB1-206ENST00000539320 CKS1BP61024 79 aa13.54□□□□□ -0.24
SCARB1-206ENST00000539320 DIRC1Q969H9 104 aa13.54□□□□□ -0.24
SCARB1-206ENST00000539320 UBE2BP63146 152 aa13.53□□□□□ -0.24
SCARB1-206ENST00000539320 C9orf129Q5T035 196 aaKnown RBP13.53□□□□□ -0.24
SCARB1-206ENST00000539320 GEMIN7Q9H840 131 aaKnown RBP13.53□□□□□ -0.24
SCARB1-206ENST00000539320 ALKBH7Q9BT30 221 aaPredicted RBP13.52□□□□□ -0.25
SCARB1-206ENST00000539320 CDKN2A-AS1Q9UH64 79 aa13.52□□□□□ -0.25
SCARB1-206ENST00000539320 C6orf226Q5I0X4 101 aa13.51□□□□□ -0.25
SCARB1-206ENST00000539320 COLCA2A8K830 154 aa13.49□□□□□ -0.25
SCARB1-206ENST00000539320 H0Y9J4 135 aa13.49□□□□□ -0.25
SCARB1-206ENST00000539320 ERASQ7Z444 233 aa13.49□□□□□ -0.25
SCARB1-206ENST00000539320 SCGB3A1Q96QR1 104 aa13.49□□□□□ -0.25
SCARB1-206ENST00000539320 GNB1LQ9BYB4 327 aa13.48□□□□□ -0.25
SCARB1-206ENST00000539320 LINC00469Q8N7U9 141 aa13.47□□□□□ -0.25
SCARB1-206ENST00000539320 LINC01549A6NIU2 74 aa13.46□□□□□ -0.25
SCARB1-206ENST00000539320 F8VRH5 84 aa13.46□□□□□ -0.25
SCARB1-206ENST00000539320 CXCL5P42830 114 aa13.46□□□□□ -0.25
SCARB1-206ENST00000539320 LINC01546A6NGU7 62 aa13.45□□□□□ -0.26
SCARB1-206ENST00000539320 COX19Q49B96 90 aa13.45□□□□□ -0.26
SCARB1-206ENST00000539320 SMIM1B2RUZ4 78 aa13.44□□□□□ -0.26
SCARB1-206ENST00000539320 MRPL18Q9H0U6 180 aaKnown RBP13.44□□□□□ -0.26
SCARB1-206ENST00000539320 XAGE1AQ9HD64 81 aa13.44□□□□□ -0.26
SCARB1-206ENST00000539320 TINCRA0A1B0GVN0 87 aa13.43□□□□□ -0.26
SCARB1-206ENST00000539320 PRR26Q8N8Z3 221 aa13.43□□□□□ -0.26
SCARB1-206ENST00000539320 TRAPPC1Q9Y5R8 145 aa13.43□□□□□ -0.26
SCARB1-206ENST00000539320 IGLV5-45A0A087WSX0 123 aa13.42□□□□□ -0.26
SCARB1-206ENST00000539320 FABP9Q0Z7S8 132 aa13.42□□□□□ -0.26
SCARB1-206ENST00000539320 FA2HQ7L5A8 372 aa13.42□□□□□ -0.26
SCARB1-206ENST00000539320 PDZD11Q5EBL8 140 aa13.41□□□□□ -0.26
SCARB1-206ENST00000539320 COX7B2Q8TF08 81 aa13.4□□□□□ -0.26
SCARB1-206ENST00000539320 C22orf24Q9Y442 160 aa13.4□□□□□ -0.26
SCARB1-206ENST00000539320 KRTAP1-4P0C5Y4 121 aa13.39□□□□□ -0.27
SCARB1-206ENST00000539320 LBHQ53QV2 105 aaPredicted RBP13.39□□□□□ -0.27
SCARB1-206ENST00000539320 CST9LQ9H4G1 147 aa13.39□□□□□ -0.27
SCARB1-206ENST00000539320 IGLV1-50A0A075B6I6 118 aa13.38□□□□□ -0.27
SCARB1-206ENST00000539320 PMVKQ15126 192 aa13.38□□□□□ -0.27
SCARB1-206ENST00000539320 NUPR1O60356 82 aa13.37□□□□□ -0.27
SCARB1-206ENST00000539320 TRGC2P03986 189 aa13.37□□□□□ -0.27
SCARB1-206ENST00000539320 TP73-AS1Q9UF72 201 aa13.37□□□□□ -0.27
SCARB1-206ENST00000539320 SPINK8P0C7L1 97 aa13.36□□□□□ -0.27
SCARB1-206ENST00000539320 ZNF861PO60384 105 aa13.34□□□□□ -0.27
SCARB1-206ENST00000539320 MRPL55Q7Z7F7 128 aaKnown RBP13.34□□□□□ -0.27
SCARB1-206ENST00000539320 H3BRM9 83 aa13.33□□□□□ -0.28
SCARB1-206ENST00000539320 A0A096LNJ9 63 aa13.3□□□□□ -0.28
SCARB1-206ENST00000539320 IGLC3P0DOY3 106 aa13.3□□□□□ -0.28
SCARB1-206ENST00000539320 RPL13AP40429 203 aaKnown RBP13.3□□□□□ -0.28
SCARB1-206ENST00000539320 RNF213Q63HN8 5207 aa13.29□□□□□ -0.28
SCARB1-206ENST00000539320 BCE1O60756 84 aa13.28□□□□□ -0.28
SCARB1-206ENST00000539320 ATP5LO75964 103 aa13.28□□□□□ -0.28
SCARB1-206ENST00000539320 C18orf32Q8TCD1 76 aa13.28□□□□□ -0.28
SCARB1-206ENST00000539320 URB1-AS1Q96HZ7 61 aa13.28□□□□□ -0.28
SCARB1-206ENST00000539320 HBDP02042 147 aa13.27□□□□□ -0.29
SCARB1-206ENST00000539320 NDUFA6P56556 154 aa13.27□□□□□ -0.29
SCARB1-206ENST00000539320 RAB5BP61020 215 aa13.27□□□□□ -0.29
SCARB1-206ENST00000539320 IGLV5-37A0A075B6J1 123 aa13.26□□□□□ -0.29
SCARB1-206ENST00000539320 IGLV5-39A0A0G2JS06 123 aa13.26□□□□□ -0.29
SCARB1-206ENST00000539320 RPL28P46779 137 aaKnown RBP13.26□□□□□ -0.29
SCARB1-206ENST00000539320 LINC00167Q96N53 147 aa13.26□□□□□ -0.29
SCARB1-206ENST00000539320 LPAP08519 4548 aa13.25□□□□□ -0.29
SCARB1-206ENST00000539320 LINC00614P0C842 121 aa13.25□□□□□ -0.29
SCARB1-206ENST00000539320 ZNF22P17026 224 aaPredicted RBP13.25□□□□□ -0.29
SCARB1-206ENST00000539320 GAGE10A6NGK3 116 aa13.24□□□□□ -0.29
SCARB1-206ENST00000539320 RPL37AP8A6NKH3 93 aa13.24□□□□□ -0.29
SCARB1-206ENST00000539320 NKAPP1Q8N9T2 125 aa13.24□□□□□ -0.29
SCARB1-206ENST00000539320 PMCHL1Q16048 86 aa13.23□□□□□ -0.29
SCARB1-206ENST00000539320 HIST1H2BKO60814 126 aa13.21□□□□□ -0.29
SCARB1-206ENST00000539320 HIST1H2BJP06899 126 aa13.21□□□□□ -0.29
SCARB1-206ENST00000539320 HIST1H2BOP23527 126 aa13.21□□□□□ -0.29
SCARB1-206ENST00000539320 HIST1H2BBP33778 126 aa13.21□□□□□ -0.29
SCARB1-206ENST00000539320 HIST1H2BDP58876 126 aa13.21□□□□□ -0.29
SCARB1-206ENST00000539320 HIST1H2BCP62807 126 aa13.21□□□□□ -0.29
SCARB1-206ENST00000539320 HIST2H2BEQ16778 126 aa13.21□□□□□ -0.29
SCARB1-206ENST00000539320 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.21□□□□□ -0.29
SCARB1-206ENST00000539320 HIST1H2BHQ93079 126 aa13.21□□□□□ -0.29
SCARB1-206ENST00000539320 HIST1H2BNQ99877 126 aa13.21□□□□□ -0.29
SCARB1-206ENST00000539320 HIST1H2BMQ99879 126 aa13.21□□□□□ -0.29
SCARB1-206ENST00000539320 PFN2P35080 140 aa13.2□□□□□ -0.3
SCARB1-206ENST00000539320 BAGE3Q86Y29 109 aa13.19□□□□□ -0.3
SCARB1-206ENST00000539320 C11orf86A6NJI1 115 aa13.18□□□□□ -0.3
SCARB1-206ENST00000539320 ERG28Q9UKR5 140 aa13.18□□□□□ -0.3
SCARB1-206ENST00000539320 TMA7Q9Y2S6 64 aaKnown RBP13.17□□□□□ -0.3
SCARB1-206ENST00000539320 UBE2AP49459 152 aa13.16□□□□□ -0.3
SCARB1-206ENST00000539320 SND1-IT1Q9HBX3 110 aa13.16□□□□□ -0.3
SCARB1-206ENST00000539320 IGKV2-28A0A075B6P5 120 aa13.15□□□□□ -0.3
SCARB1-206ENST00000539320 IGKV2D-28P01615 120 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms