RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 PRO0628Q9UI54 55 aa6.22□□□□□ -1.41
GGA3-202ENST00000538886 C11orf86A6NJI1 115 aa6.21□□□□□ -1.41
GGA3-202ENST00000538886 PYGO1Q9Y3Y4 419 aa6.21□□□□□ -1.41
GGA3-202ENST00000538886 IGKV2D-24A0A075B6R9 120 aa6.21□□□□□ -1.42
GGA3-202ENST00000538886 TMEM243Q9BU79 118 aa6.21□□□□□ -1.42
GGA3-202ENST00000538886 MEGF8Q7Z7M0 2845 aa6.21□□□□□ -1.42
GGA3-202ENST00000538886 SMIM2Q9BVW6 85 aa6.21□□□□□ -1.42
GGA3-202ENST00000538886 KLK12Q9UKR0 248 aa6.21□□□□□ -1.42
GGA3-202ENST00000538886 MALP21145 153 aa6.2□□□□□ -1.42
GGA3-202ENST00000538886 DAZ2Q13117 558 aaKnown RBP6.2□□□□□ -1.42
GGA3-202ENST00000538886 SUMO4Q6EEV6 95 aa6.2□□□□□ -1.42
GGA3-202ENST00000538886 SPANXCQ9NY87 97 aa6.2□□□□□ -1.42
GGA3-202ENST00000538886 H7C423 109 aa6.2□□□□□ -1.42
GGA3-202ENST00000538886 S100A7L2Q5SY68 101 aa6.2□□□□□ -1.42
GGA3-202ENST00000538886 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.2□□□□□ -1.42
GGA3-202ENST00000538886 IGKV2-29A2NJV5 120 aaPredicted RBP6.2□□□□□ -1.42
GGA3-202ENST00000538886 H3BT86 120 aa6.2□□□□□ -1.42
GGA3-202ENST00000538886 PAPPA-AS1Q5QFB9 102 aa6.2□□□□□ -1.42
GGA3-202ENST00000538886 LINC00336Q6ZUF6 198 aa6.19□□□□□ -1.42
GGA3-202ENST00000538886 TRBV7-7A0A0K0K1E9 115 aa6.19□□□□□ -1.42
GGA3-202ENST00000538886 SUMO2P61956 95 aaKnown RBP6.19□□□□□ -1.42
GGA3-202ENST00000538886 RPS28P62857 69 aaKnown RBP6.19□□□□□ -1.42
GGA3-202ENST00000538886 RNF185Q96GF1 192 aa6.19□□□□□ -1.42
GGA3-202ENST00000538886 ZNF625Q96I27 306 aaPredicted RBP6.19□□□□□ -1.42
GGA3-202ENST00000538886 A8MZ25 164 aa6.19□□□□□ -1.42
GGA3-202ENST00000538886 LECT2O14960 151 aa6.19□□□□□ -1.42
GGA3-202ENST00000538886 FAM19A4Q96LR4 140 aa6.18□□□□□ -1.42
GGA3-202ENST00000538886 IMUPQ9GZP8 106 aa6.18□□□□□ -1.42
GGA3-202ENST00000538886 ACYP1P07311 99 aa6.18□□□□□ -1.42
GGA3-202ENST00000538886 C11orf72Q8NBR9 251 aa6.18□□□□□ -1.42
GGA3-202ENST00000538886 C11orf68Q9H3H3 251 aaKnown RBP6.18□□□□□ -1.42
GGA3-202ENST00000538886 TOMM7Q9P0U1 55 aa6.18□□□□□ -1.42
GGA3-202ENST00000538886 Q9UF83 564 aa6.18□□□□□ -1.42
GGA3-202ENST00000538886 A0A0B4J2C4 111 aa6.18□□□□□ -1.42
GGA3-202ENST00000538886 C20orf197Q8N268 126 aa6.18□□□□□ -1.42
GGA3-202ENST00000538886 A0A087WVE0 104 aa6.17□□□□□ -1.42
GGA3-202ENST00000538886 TRAV12-1A0A0B4J245 112 aa6.17□□□□□ -1.42
GGA3-202ENST00000538886 RBM3P98179 157 aaKnown RBP6.17□□□□□ -1.42
GGA3-202ENST00000538886 NXPH4O95158 308 aa6.17□□□□□ -1.42
GGA3-202ENST00000538886 Q6ZSN1 163 aa6.17□□□□□ -1.42
GGA3-202ENST00000538886 FHL2Q14192 279 aa6.17□□□□□ -1.42
GGA3-202ENST00000538886 SPANXDQ9BXN6 97 aa6.16□□□□□ -1.42
GGA3-202ENST00000538886 VCYO14598 125 aa6.16□□□□□ -1.42
GGA3-202ENST00000538886 CRYGDP07320 174 aa6.16□□□□□ -1.42
GGA3-202ENST00000538886 NEXN-AS1Q8NBZ9 246 aa6.16□□□□□ -1.42
GGA3-202ENST00000538886 PPP1R17O96001 155 aa6.16□□□□□ -1.42
GGA3-202ENST00000538886 CRYGAP11844 174 aa6.16□□□□□ -1.42
GGA3-202ENST00000538886 CASC10Q5T4H9 136 aa6.16□□□□□ -1.42
GGA3-202ENST00000538886 C9orf85Q96MD7 179 aa6.16□□□□□ -1.42
GGA3-202ENST00000538886 RPL39P62891 51 aaKnown RBP6.15□□□□□ -1.42
GGA3-202ENST00000538886 SERP2Q8N6R1 65 aa6.15□□□□□ -1.42
GGA3-202ENST00000538886 POM121L12Q8N7R1 296 aa6.15□□□□□ -1.42
GGA3-202ENST00000538886 Q9H8V8 135 aa6.15□□□□□ -1.42
GGA3-202ENST00000538886 FAM240AA0A1B0GVK7 77 aa6.15□□□□□ -1.42
GGA3-202ENST00000538886 DAND5Q8N907 189 aa6.15□□□□□ -1.42
GGA3-202ENST00000538886 TRBV6-1A0A0K0K1D8 114 aa6.15□□□□□ -1.43
GGA3-202ENST00000538886 BAALC-AS2P0C853 105 aa6.15□□□□□ -1.43
GGA3-202ENST00000538886 TSPEAR-AS2P59090 65 aa6.15□□□□□ -1.43
GGA3-202ENST00000538886 RPL18AQ02543 176 aaKnown RBP6.15□□□□□ -1.43
GGA3-202ENST00000538886 DAZ4Q86SG3 579 aaKnown RBP6.15□□□□□ -1.43
GGA3-202ENST00000538886 DAZ3Q9NR90 486 aaKnown RBP6.15□□□□□ -1.43
GGA3-202ENST00000538886 I3L3M4 83 aa6.14□□□□□ -1.43
GGA3-202ENST00000538886 XCL1P47992 114 aa6.14□□□□□ -1.43
GGA3-202ENST00000538886 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.14□□□□□ -1.43
GGA3-202ENST00000538886 WFDC10BQ8IUB3 73 aa6.14□□□□□ -1.43
GGA3-202ENST00000538886 C3orf84H3BNL1 204 aa6.14□□□□□ -1.43
GGA3-202ENST00000538886 ESRGQ1W209 222 aa6.14□□□□□ -1.43
GGA3-202ENST00000538886 MPLKIPQ8TAP9 179 aa6.14□□□□□ -1.43
GGA3-202ENST00000538886 CYSTM1Q9H1C7 97 aa6.14□□□□□ -1.43
GGA3-202ENST00000538886 TRBV6-4A0A1B0GX49 114 aa6.13□□□□□ -1.43
GGA3-202ENST00000538886 TOMM6Q96B49 74 aa6.13□□□□□ -1.43
GGA3-202ENST00000538886 TRAV23DV6A0A075B6W5 121 aa6.13□□□□□ -1.43
GGA3-202ENST00000538886 USP17L23D6RBM5 183 aa6.13□□□□□ -1.43
GGA3-202ENST00000538886 INAFM2P0DMQ5 153 aa6.13□□□□□ -1.43
GGA3-202ENST00000538886 TRBV30A0A0K0K1B3 111 aa6.13□□□□□ -1.43
GGA3-202ENST00000538886 GHRHP01286 108 aa6.12□□□□□ -1.43
GGA3-202ENST00000538886 LINC00269Q8N2A0 174 aa6.12□□□□□ -1.43
GGA3-202ENST00000538886 OPRPNQ99935 248 aaPredicted RBP6.12□□□□□ -1.43
GGA3-202ENST00000538886 PLAC8L1A1L4L8 177 aa6.12□□□□□ -1.43
GGA3-202ENST00000538886 SMCR5Q8TEV8 140 aa6.12□□□□□ -1.43
GGA3-202ENST00000538886 C2orf48Q96LS8 159 aa6.12□□□□□ -1.43
GGA3-202ENST00000538886 TIMM21Q9BVV7 248 aa6.12□□□□□ -1.43
GGA3-202ENST00000538886 OXTP01178 125 aa6.11□□□□□ -1.43
GGA3-202ENST00000538886 M0QY20 66 aa6.11□□□□□ -1.43
GGA3-202ENST00000538886 NDUFC2O95298 119 aa6.11□□□□□ -1.43
GGA3-202ENST00000538886 NRACQ8N912 160 aa6.11□□□□□ -1.43
GGA3-202ENST00000538886 TRBV10-1A0A0K0K1A3 114 aa6.11□□□□□ -1.43
GGA3-202ENST00000538886 LYPD5Q6UWN5 251 aa6.11□□□□□ -1.43
GGA3-202ENST00000538886 NDUFA12Q9UI09 145 aa6.11□□□□□ -1.43
GGA3-202ENST00000538886 A0A0J9YXV3 536 aa6.1□□□□□ -1.43
GGA3-202ENST00000538886 LST1O00453 97 aa6.1□□□□□ -1.43
GGA3-202ENST00000538886 Q5XG85 94 aa6.1□□□□□ -1.43
GGA3-202ENST00000538886 Q8N3U1 123 aa6.1□□□□□ -1.43
GGA3-202ENST00000538886 MED14OSP0DP75 135 aa6.1□□□□□ -1.43
GGA3-202ENST00000538886 C5orf38Q86SI9 138 aa6.1□□□□□ -1.43
GGA3-202ENST00000538886 TRBV6-8A0A0A6YYG3 113 aa6.1□□□□□ -1.43
GGA3-202ENST00000538886 TMEM223A0PJW6 202 aa6.1□□□□□ -1.43
GGA3-202ENST00000538886 TIRAPP58753 221 aa6.1□□□□□ -1.43
GGA3-202ENST00000538886 C14orf132Q9NPU4 83 aa6.1□□□□□ -1.43
GGA3-202ENST00000538886 LINC00588Q9Y4M8 146 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms