RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 DAND5Q8N907 189 aa4.6□□□□□ -1.67
USP28-206ENST00000538224 SPATA3Q8NHX4 192 aa4.6□□□□□ -1.67
USP28-206ENST00000538224 CARD19Q96LW7 228 aa4.6□□□□□ -1.67
USP28-206ENST00000538224 ANAPC13Q9BS18 74 aa4.6□□□□□ -1.67
USP28-206ENST00000538224 XCL1P47992 114 aa4.59□□□□□ -1.67
USP28-206ENST00000538224 LINC00158P58513 81 aa4.59□□□□□ -1.67
USP28-206ENST00000538224 EGFEM1PQ0D2K5 195 aa4.59□□□□□ -1.67
USP28-206ENST00000538224 COX17Q14061 63 aa4.59□□□□□ -1.67
USP28-206ENST00000538224 C6orf226Q5I0X4 101 aa4.59□□□□□ -1.67
USP28-206ENST00000538224 MIR7-3HGQ8N6C7 128 aa4.59□□□□□ -1.67
USP28-206ENST00000538224 C11orf68Q9H3H3 251 aaKnown RBP4.59□□□□□ -1.67
USP28-206ENST00000538224 TENM1Q9UKZ4 2725 aa4.59□□□□□ -1.67
USP28-206ENST00000538224 VWFP04275 2813 aa4.59□□□□□ -1.68
USP28-206ENST00000538224 A0A0U1RRA0 63 aa4.58□□□□□ -1.68
USP28-206ENST00000538224 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
USP28-206ENST00000538224 TRACP01848 142 aa4.58□□□□□ -1.68
USP28-206ENST00000538224 ANGP03950 147 aaKnown RBP4.58□□□□□ -1.68
USP28-206ENST00000538224 REG3AQ06141 175 aa4.58□□□□□ -1.68
USP28-206ENST00000538224 C2orf82Q6UX34 121 aa4.58□□□□□ -1.68
USP28-206ENST00000538224 SOSTDC1Q6X4U4 206 aa4.58□□□□□ -1.68
USP28-206ENST00000538224 C5orf38Q86SI9 138 aa4.58□□□□□ -1.68
USP28-206ENST00000538224 LINC00269Q8N2A0 174 aa4.58□□□□□ -1.68
USP28-206ENST00000538224 UBE2WQ96B02 151 aa4.58□□□□□ -1.68
USP28-206ENST00000538224 KRTAP4-6Q9BYQ5 205 aa4.58□□□□□ -1.68
USP28-206ENST00000538224 SND1-IT1Q9HBX3 110 aa4.58□□□□□ -1.68
USP28-206ENST00000538224 CELA1Q9UNI1 258 aa4.58□□□□□ -1.68
USP28-206ENST00000538224 ATRQ13535 2644 aa4.57□□□□□ -1.68
USP28-206ENST00000538224 A0A096LPF7 62 aa4.57□□□□□ -1.68
USP28-206ENST00000538224 B5MCH6 92 aa4.57□□□□□ -1.68
USP28-206ENST00000538224 F8WDY8 70 aa4.57□□□□□ -1.68
USP28-206ENST00000538224 DEFB4AO15263 64 aa4.57□□□□□ -1.68
USP28-206ENST00000538224 MALP21145 153 aa4.57□□□□□ -1.68
USP28-206ENST00000538224 RPL28P46779 137 aaKnown RBP4.57□□□□□ -1.68
USP28-206ENST00000538224 C3orf56Q8N813 242 aa4.57□□□□□ -1.68
USP28-206ENST00000538224 CHCHD10Q8WYQ3 142 aaPredicted RBP4.57□□□□□ -1.68
USP28-206ENST00000538224 TRAV8-4A0A0B4J246 113 aa4.56□□□□□ -1.68
USP28-206ENST00000538224 H0YGX0 51 aa4.56□□□□□ -1.68
USP28-206ENST00000538224 HTN3P15516 51 aa4.56□□□□□ -1.68
USP28-206ENST00000538224 KRTAP24-1Q3LI83 254 aa4.56□□□□□ -1.68
USP28-206ENST00000538224 Q6Q795 121 aa4.56□□□□□ -1.68
USP28-206ENST00000538224 CLPSL2Q6UWE3 100 aa4.56□□□□□ -1.68
USP28-206ENST00000538224 NTN5Q8WTR8 489 aaPredicted RBP4.56□□□□□ -1.68
USP28-206ENST00000538224 NDUFC2O95298 119 aa4.55□□□□□ -1.68
USP28-206ENST00000538224 CCL18P55774 89 aa4.55□□□□□ -1.68
USP28-206ENST00000538224 MRAPQ8TCY5 172 aa4.55□□□□□ -1.68
USP28-206ENST00000538224 CLEC2BQ92478 149 aa4.55□□□□□ -1.68
USP28-206ENST00000538224 CDIP1Q9H305 208 aa4.55□□□□□ -1.68
USP28-206ENST00000538224 PRR34Q9NV39 138 aa4.55□□□□□ -1.68
USP28-206ENST00000538224 KLK5Q9Y337 293 aaPredicted RBP4.55□□□□□ -1.68
USP28-206ENST00000538224 FAM240AA0A1B0GVK7 77 aa4.54□□□□□ -1.68
USP28-206ENST00000538224 DNAL4O96015 105 aa4.54□□□□□ -1.68
USP28-206ENST00000538224 PFN2P35080 140 aa4.54□□□□□ -1.68
USP28-206ENST00000538224 SPAG11BQ08648 103 aa4.54□□□□□ -1.68
USP28-206ENST00000538224 OXLD1Q5BKU9 147 aa4.54□□□□□ -1.68
USP28-206ENST00000538224 IGKV2-28A0A075B6P5 120 aa4.53□□□□□ -1.68
USP28-206ENST00000538224 A0A1B0GX51 115 aa4.53□□□□□ -1.68
USP28-206ENST00000538224 SNCGO76070 127 aa4.53□□□□□ -1.68
USP28-206ENST00000538224 IGKV2D-28P01615 120 aa4.53□□□□□ -1.68
USP28-206ENST00000538224 ACYP1P07311 99 aa4.53□□□□□ -1.68
USP28-206ENST00000538224 NHLRC4P0CG21 123 aaPredicted RBP4.53□□□□□ -1.68
USP28-206ENST00000538224 KRTAP10-11P60412 298 aa4.53□□□□□ -1.68
USP28-206ENST00000538224 KIAA0087Q14695 138 aa4.53□□□□□ -1.68
USP28-206ENST00000538224 DEFB121Q5J5C9 76 aa4.53□□□□□ -1.68
USP28-206ENST00000538224 KPRPQ5T749 579 aaPredicted RBP4.53□□□□□ -1.68
USP28-206ENST00000538224 LYPD5Q6UWN5 251 aa4.53□□□□□ -1.68
USP28-206ENST00000538224 LINC00337Q8N6G1 96 aa4.53□□□□□ -1.68
USP28-206ENST00000538224 FLNBO75369 2602 aaKnown RBP4.52□□□□□ -1.69
USP28-206ENST00000538224 IGLV10-54A0A075B6I4 117 aa4.52□□□□□ -1.69
USP28-206ENST00000538224 GVQW2A0A096LPI5 108 aaPredicted RBP4.52□□□□□ -1.69
USP28-206ENST00000538224 A0A0J9YWU9 116 aa4.52□□□□□ -1.69
USP28-206ENST00000538224 INAFM2P0DMQ5 153 aa4.52□□□□□ -1.69
USP28-206ENST00000538224 RPS28P62857 69 aaKnown RBP4.52□□□□□ -1.69
USP28-206ENST00000538224 OR13C6PQ8NH95 151 aa4.52□□□□□ -1.69
USP28-206ENST00000538224 SMIM11BQ8TCY0 68 aa4.52□□□□□ -1.69
USP28-206ENST00000538224 KLK12Q9UKR0 248 aa4.52□□□□□ -1.69
USP28-206ENST00000538224 NBEAL2Q6ZNJ1 2754 aa4.52□□□□□ -1.69
USP28-206ENST00000538224 F8P00451 2351 aa4.51□□□□□ -1.69
USP28-206ENST00000538224 TEX49A0A1B0GTD5 131 aa4.51□□□□□ -1.69
USP28-206ENST00000538224 MT-ATP8P03928 68 aa4.51□□□□□ -1.69
USP28-206ENST00000538224 NDUFV3P56181 108 aaKnown RBP4.51□□□□□ -1.69
USP28-206ENST00000538224 C15orf53Q8NAA6 179 aa4.51□□□□□ -1.69
USP28-206ENST00000538224 DEFB131BA0A096LNP1 70 aa4.5□□□□□ -1.69
USP28-206ENST00000538224 BAALC-AS2P0C853 105 aa4.5□□□□□ -1.69
USP28-206ENST00000538224 XGP55808 180 aa4.5□□□□□ -1.69
USP28-206ENST00000538224 Q6ZTC4 211 aa4.5□□□□□ -1.69
USP28-206ENST00000538224 C11orf45Q8TAV5 145 aa4.5□□□□□ -1.69
USP28-206ENST00000538224 RETNQ9HD89 108 aa4.5□□□□□ -1.69
USP28-206ENST00000538224 MAST4O15021 2626 aa4.49□□□□□ -1.69
USP28-206ENST00000538224 TRAV10A0A0B4J240 114 aa4.49□□□□□ -1.69
USP28-206ENST00000538224 H3BQ85 93 aa4.49□□□□□ -1.69
USP28-206ENST00000538224 J3KT08 172 aa4.49□□□□□ -1.69
USP28-206ENST00000538224 GAGE2BQ13066 116 aa4.49□□□□□ -1.69
USP28-206ENST00000538224 GAGE2EQ4V326 116 aa4.49□□□□□ -1.69
USP28-206ENST00000538224 TTC32Q5I0X7 151 aa4.49□□□□□ -1.69
USP28-206ENST00000538224 LINC01556Q5JQF7 62 aa4.49□□□□□ -1.69
USP28-206ENST00000538224 ENHOQ6UWT2 76 aa4.49□□□□□ -1.69
USP28-206ENST00000538224 Q8N3U1 123 aa4.49□□□□□ -1.69
USP28-206ENST00000538224 GAGE2DQ9UEU5 116 aa4.49□□□□□ -1.69
USP28-206ENST00000538224 CYSRT1A8MQ03 144 aa4.48□□□□□ -1.69
USP28-206ENST00000538224 CCDC179H3BU77 68 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms