RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 LECT2O14960 151 aa8.49□□□□□ -1.05
CPSF7-218ENST00000537641 RPL18AQ02543 176 aaKnown RBP8.49□□□□□ -1.05
CPSF7-218ENST00000537641 LINC00167Q96N53 147 aa8.49□□□□□ -1.05
CPSF7-218ENST00000537641 C14orf132Q9NPU4 83 aa8.49□□□□□ -1.05
CPSF7-218ENST00000537641 PAX4O43316 350 aa8.49□□□□□ -1.05
CPSF7-218ENST00000537641 HILS1P60008 231 aa8.49□□□□□ -1.05
CPSF7-218ENST00000537641 FHL2Q14192 279 aa8.49□□□□□ -1.05
CPSF7-218ENST00000537641 IGKV3OR2-268A0A0C4DH90 116 aa8.48□□□□□ -1.05
CPSF7-218ENST00000537641 ORMDL1Q9P0S3 153 aa8.48□□□□□ -1.05
CPSF7-218ENST00000537641 LINC00959A0A1B0GUT2 108 aa8.47□□□□□ -1.05
CPSF7-218ENST00000537641 C9orf129Q5T035 196 aaKnown RBP8.47□□□□□ -1.05
CPSF7-218ENST00000537641 Q8IZM0 81 aa8.47□□□□□ -1.05
CPSF7-218ENST00000537641 CSNK1G2-AS1Q8NCQ2 148 aa8.47□□□□□ -1.05
CPSF7-218ENST00000537641 ITPR2Q14571 2701 aa8.47□□□□□ -1.05
CPSF7-218ENST00000537641 PFN2P35080 140 aa8.46□□□□□ -1.05
CPSF7-218ENST00000537641 S100A7L2Q5SY68 101 aa8.46□□□□□ -1.05
CPSF7-218ENST00000537641 OR13C6PQ8NH95 151 aa8.46□□□□□ -1.05
CPSF7-218ENST00000537641 LINC00846Q9NV44 126 aa8.46□□□□□ -1.05
CPSF7-218ENST00000537641 ACANP16112 2415 aa8.46□□□□□ -1.06
CPSF7-218ENST00000537641 IGLV1-51P01701 117 aa8.46□□□□□ -1.06
CPSF7-218ENST00000537641 C19orf73Q9NVV2 129 aa8.46□□□□□ -1.06
CPSF7-218ENST00000537641 HELZ2Q9BYK8 2649 aaKnown RBP8.45□□□□□ -1.06
CPSF7-218ENST00000537641 JMJD7-PLA2G4BH0Y9G9 81 aa8.45□□□□□ -1.06
CPSF7-218ENST00000537641 SS18Q15532 418 aa8.45□□□□□ -1.06
CPSF7-218ENST00000537641 C6orf226Q5I0X4 101 aa8.45□□□□□ -1.06
CPSF7-218ENST00000537641 UNC79Q9P2D8 2635 aa8.45□□□□□ -1.06
CPSF7-218ENST00000537641 J3KT08 172 aa8.44□□□□□ -1.06
CPSF7-218ENST00000537641 NCR3O14931 201 aa8.44□□□□□ -1.06
CPSF7-218ENST00000537641 CCKP06307 115 aa8.44□□□□□ -1.06
CPSF7-218ENST00000537641 RPL35AP18077 110 aaKnown RBP8.44□□□□□ -1.06
CPSF7-218ENST00000537641 ATP5EP2Q5VTU8 51 aa8.44□□□□□ -1.06
CPSF7-218ENST00000537641 ANK3Q12955 4377 aaKnown RBP8.44□□□□□ -1.06
CPSF7-218ENST00000537641 IGKV3D-7A0A0C4DH55 119 aa8.43□□□□□ -1.06
CPSF7-218ENST00000537641 A0A1B0GUV1 79 aa8.43□□□□□ -1.06
CPSF7-218ENST00000537641 NDUFC2O95298 119 aa8.43□□□□□ -1.06
CPSF7-218ENST00000537641 SERP2Q8N6R1 65 aa8.43□□□□□ -1.06
CPSF7-218ENST00000537641 KIR2DL5BQ8NHK3 375 aa8.43□□□□□ -1.06
CPSF7-218ENST00000537641 LINC00612Q8N6U2 182 aa8.43□□□□□ -1.06
CPSF7-218ENST00000537641 CUBNO60494 3623 aa8.42□□□□□ -1.06
CPSF7-218ENST00000537641 MTORP42345 2549 aa8.42□□□□□ -1.06
CPSF7-218ENST00000537641 WFDC10AQ9H1F0 79 aa8.42□□□□□ -1.06
CPSF7-218ENST00000537641 SLPIP03973 132 aa8.41□□□□□ -1.06
CPSF7-218ENST00000537641 RPS28P62857 69 aaKnown RBP8.41□□□□□ -1.06
CPSF7-218ENST00000537641 COX17Q14061 63 aa8.41□□□□□ -1.06
CPSF7-218ENST00000537641 SETXQ7Z333 2677 aaKnown RBP8.41□□□□□ -1.06
CPSF7-218ENST00000537641 TMEM256-PLSCR3K7ERE1 68 aa8.4□□□□□ -1.06
CPSF7-218ENST00000537641 TMEM258P61165 79 aa8.4□□□□□ -1.06
CPSF7-218ENST00000537641 SETD2Q9BYW2 2564 aaPredicted RBP8.4□□□□□ -1.06
CPSF7-218ENST00000537641 hADV29S1A0JD25 119 aa8.4□□□□□ -1.07
CPSF7-218ENST00000537641 USP17L23D6RBM5 183 aa8.4□□□□□ -1.07
CPSF7-218ENST00000537641 NANOS2P60321 138 aaKnown RBP8.4□□□□□ -1.07
CPSF7-218ENST00000537641 CFAP161Q6P656 301 aa8.4□□□□□ -1.07
CPSF7-218ENST00000537641 Q8N814 137 aa8.4□□□□□ -1.07
CPSF7-218ENST00000537641 UPK3BQ9BT76 320 aa8.4□□□□□ -1.07
CPSF7-218ENST00000537641 C11orf68Q9H3H3 251 aaKnown RBP8.4□□□□□ -1.07
CPSF7-218ENST00000537641 XCL1P47992 114 aa8.39□□□□□ -1.07
CPSF7-218ENST00000537641 SMR3AQ99954 134 aa8.39□□□□□ -1.07
CPSF7-218ENST00000537641 GYPEP15421 78 aa8.38□□□□□ -1.07
CPSF7-218ENST00000537641 A0A087WVE0 104 aa8.37□□□□□ -1.07
CPSF7-218ENST00000537641 TRBV10-3A0A0K0K1G6 114 aa8.37□□□□□ -1.07
CPSF7-218ENST00000537641 LYPD5Q6UWN5 251 aa8.37□□□□□ -1.07
CPSF7-218ENST00000537641 HIVEP2P31629 2446 aa8.37□□□□□ -1.07
CPSF7-218ENST00000537641 FASNP49327 2511 aaKnown RBP8.37□□□□□ -1.07
CPSF7-218ENST00000537641 IGHV4-28A0A0C4DH34 117 aa8.37□□□□□ -1.07
CPSF7-218ENST00000537641 MUC7Q8TAX7 377 aa8.37□□□□□ -1.07
CPSF7-218ENST00000537641 KIAA0087Q14695 138 aa8.36□□□□□ -1.07
CPSF7-218ENST00000537641 CD164L2Q6UWJ8 174 aa8.36□□□□□ -1.07
CPSF7-218ENST00000537641 JMJD1CQ15652 2540 aa8.36□□□□□ -1.07
CPSF7-218ENST00000537641 KRTAP10-3P60369 221 aa8.35□□□□□ -1.07
CPSF7-218ENST00000537641 LINC00482Q8N8I6 264 aa8.35□□□□□ -1.07
CPSF7-218ENST00000537641 PRO0255Q9UI72 69 aa8.35□□□□□ -1.07
CPSF7-218ENST00000537641 DEFB130BP0DP73 79 aa8.34□□□□□ -1.07
CPSF7-218ENST00000537641 DEFB130AP0DP74 79 aa8.34□□□□□ -1.07
CPSF7-218ENST00000537641 GCN1Q92616 2671 aaKnown RBP8.34□□□□□ -1.07
CPSF7-218ENST00000537641 NIPBLQ6KC79 2804 aaeCLIP8.34□□□□□ -1.07
CPSF7-218ENST00000537641 LOC107984640A0A0U1RRK4 108 aa8.34□□□□□ -1.07
CPSF7-218ENST00000537641 SMIM9A6NGZ8 99 aa8.34□□□□□ -1.07
CPSF7-218ENST00000537641 NDUFC2-KCTD14E9PQ53 114 aa8.33□□□□□ -1.08
CPSF7-218ENST00000537641 UBL5Q9BZL1 73 aa8.33□□□□□ -1.08
CPSF7-218ENST00000537641 BCE1O60756 84 aa8.32□□□□□ -1.08
CPSF7-218ENST00000537641 CLPSL2Q6UWE3 100 aa8.32□□□□□ -1.08
CPSF7-218ENST00000537641 CYSTM1Q9H1C7 97 aa8.32□□□□□ -1.08
CPSF7-218ENST00000537641 H3BQ85 93 aa8.32□□□□□ -1.08
CPSF7-218ENST00000537641 GHRHP01286 108 aa8.32□□□□□ -1.08
CPSF7-218ENST00000537641 LINC00575Q6W349 94 aa8.32□□□□□ -1.08
CPSF7-218ENST00000537641 FAM19A5Q7Z5A7 132 aaPredicted RBP8.32□□□□□ -1.08
CPSF7-218ENST00000537641 LOC110117498A0A087WWA1 95 aa8.31□□□□□ -1.08
CPSF7-218ENST00000537641 LYRM9A8MSI8 78 aa8.31□□□□□ -1.08
CPSF7-218ENST00000537641 ZNF561-AS1K7EIQ3 104 aa8.31□□□□□ -1.08
CPSF7-218ENST00000537641 C6orf99Q4VX62 202 aa8.31□□□□□ -1.08
CPSF7-218ENST00000537641 CHCHD10Q8WYQ3 142 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-218ENST00000537641 DPH3Q96FX2 82 aa8.31□□□□□ -1.08
CPSF7-218ENST00000537641 NOTCH3Q9UM47 2321 aa8.31□□□□□ -1.08
CPSF7-218ENST00000537641 PRR3P79522 188 aaKnown RBP8.3□□□□□ -1.08
CPSF7-218ENST00000537641 C6orf223Q8N319 242 aa8.3□□□□□ -1.08
CPSF7-218ENST00000537641 X6R8D5 127 aa8.3□□□□□ -1.08
CPSF7-218ENST00000537641 LINC00269Q8N2A0 174 aa8.29□□□□□ -1.08
CPSF7-218ENST00000537641 INAFM1C9JVW0 142 aa8.29□□□□□ -1.08
CPSF7-218ENST00000537641 REG3AQ06141 175 aa8.29□□□□□ -1.08
CPSF7-218ENST00000537641 C5orf47Q569G3 176 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms