RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 CLEC2BQ92478 149 aa6.37□□□□□ -1.39
UBE3B-207ENST00000537063 IGKV2-28A0A075B6P5 120 aa6.37□□□□□ -1.39
UBE3B-207ENST00000537063 IGKV2D-28P01615 120 aa6.37□□□□□ -1.39
UBE3B-207ENST00000537063 KIAA0087Q14695 138 aa6.37□□□□□ -1.39
UBE3B-207ENST00000537063 LINC00269Q8N2A0 174 aa6.37□□□□□ -1.39
UBE3B-207ENST00000537063 Q8N3U1 123 aa6.36□□□□□ -1.39
UBE3B-207ENST00000537063 TRAV13-2A0A0B4J235 113 aa6.36□□□□□ -1.39
UBE3B-207ENST00000537063 H3BNG1 76 aa6.36□□□□□ -1.39
UBE3B-207ENST00000537063 OXLD1Q5BKU9 147 aa6.36□□□□□ -1.39
UBE3B-207ENST00000537063 CDIP1Q9H305 208 aa6.36□□□□□ -1.39
UBE3B-207ENST00000537063 CCL18P55774 89 aa6.36□□□□□ -1.39
UBE3B-207ENST00000537063 REG3AQ06141 175 aa6.36□□□□□ -1.39
UBE3B-207ENST00000537063 CHCHD10Q8WYQ3 142 aaPredicted RBP6.36□□□□□ -1.39
UBE3B-207ENST00000537063 C11orf68Q9H3H3 251 aaKnown RBP6.36□□□□□ -1.39
UBE3B-207ENST00000537063 PRR34Q9NV39 138 aa6.36□□□□□ -1.39
UBE3B-207ENST00000537063 RPL28P46779 137 aaKnown RBP6.35□□□□□ -1.39
UBE3B-207ENST00000537063 CLPSL2Q6UWE3 100 aa6.35□□□□□ -1.39
UBE3B-207ENST00000537063 LINC00337Q8N6G1 96 aa6.35□□□□□ -1.39
UBE3B-207ENST00000537063 SND1-IT1Q9HBX3 110 aa6.35□□□□□ -1.39
UBE3B-207ENST00000537063 CXCL5P42830 114 aa6.35□□□□□ -1.39
UBE3B-207ENST00000537063 LINC00158P58513 81 aa6.35□□□□□ -1.39
UBE3B-207ENST00000537063 C6orf226Q5I0X4 101 aa6.34□□□□□ -1.39
UBE3B-207ENST00000537063 ANGP03950 147 aaKnown RBP6.34□□□□□ -1.39
UBE3B-207ENST00000537063 CRPP02741 224 aa6.33□□□□□ -1.4
UBE3B-207ENST00000537063 DEFB121Q5J5C9 76 aa6.33□□□□□ -1.4
UBE3B-207ENST00000537063 SIGMAR1Q99720 223 aa6.33□□□□□ -1.4
UBE3B-207ENST00000537063 F8P00451 2351 aa6.33□□□□□ -1.4
UBE3B-207ENST00000537063 TRACP01848 142 aa6.33□□□□□ -1.4
UBE3B-207ENST00000537063 COX17Q14061 63 aa6.33□□□□□ -1.4
UBE3B-207ENST00000537063 NTN5Q8WTR8 489 aaPredicted RBP6.33□□□□□ -1.4
UBE3B-207ENST00000537063 ANK2Q01484 3957 aa6.33□□□□□ -1.4
UBE3B-207ENST00000537063 SCGB1A1P11684 91 aa6.33□□□□□ -1.4
UBE3B-207ENST00000537063 C2orf82Q6UX34 121 aa6.33□□□□□ -1.4
UBE3B-207ENST00000537063 LYPD5Q6UWN5 251 aa6.32□□□□□ -1.4
UBE3B-207ENST00000537063 KLK5Q9Y337 293 aaPredicted RBP6.32□□□□□ -1.4
UBE3B-207ENST00000537063 RETNQ9HD89 108 aa6.32□□□□□ -1.4
UBE3B-207ENST00000537063 HTN3P15516 51 aa6.32□□□□□ -1.4
UBE3B-207ENST00000537063 UBE2WQ96B02 151 aa6.32□□□□□ -1.4
UBE3B-207ENST00000537063 PFN2P35080 140 aa6.31□□□□□ -1.4
UBE3B-207ENST00000537063 C21orf62-AS1Q17RA5 79 aa6.31□□□□□ -1.4
UBE3B-207ENST00000537063 FAM218AQ96MZ4 157 aa6.31□□□□□ -1.4
UBE3B-207ENST00000537063 FBN1P35555 2871 aaKnown RBP6.31□□□□□ -1.4
UBE3B-207ENST00000537063 TEX49A0A1B0GTD5 131 aa6.31□□□□□ -1.4
UBE3B-207ENST00000537063 ENHOQ6UWT2 76 aa6.31□□□□□ -1.4
UBE3B-207ENST00000537063 C3orf56Q8N813 242 aa6.3□□□□□ -1.4
UBE3B-207ENST00000537063 IGLV10-54A0A075B6I4 117 aa6.3□□□□□ -1.4
UBE3B-207ENST00000537063 NDUFC2O95298 119 aa6.3□□□□□ -1.4
UBE3B-207ENST00000537063 CKS1BP61024 79 aa6.3□□□□□ -1.4
UBE3B-207ENST00000537063 MUC7Q8TAX7 377 aa6.3□□□□□ -1.4
UBE3B-207ENST00000537063 SMIM11BQ8TCY0 68 aa6.3□□□□□ -1.4
UBE3B-207ENST00000537063 CFAP161Q6P656 301 aa6.29□□□□□ -1.4
UBE3B-207ENST00000537063 MALP21145 153 aa6.29□□□□□ -1.4
UBE3B-207ENST00000537063 KPRPQ5T749 579 aaPredicted RBP6.29□□□□□ -1.4
UBE3B-207ENST00000537063 C22orf24Q9Y442 160 aa6.29□□□□□ -1.4
UBE3B-207ENST00000537063 A0A0J9YWU9 116 aa6.28□□□□□ -1.4
UBE3B-207ENST00000537063 Q6ZTC4 211 aa6.28□□□□□ -1.4
UBE3B-207ENST00000537063 TRAV8-4A0A0B4J246 113 aa6.28□□□□□ -1.4
UBE3B-207ENST00000537063 XGP55808 180 aa6.28□□□□□ -1.4
UBE3B-207ENST00000537063 KLK12Q9UKR0 248 aa6.28□□□□□ -1.4
UBE3B-207ENST00000537063 GVQW2A0A096LPI5 108 aaPredicted RBP6.27□□□□□ -1.4
UBE3B-207ENST00000537063 FAM240AA0A1B0GVK7 77 aa6.27□□□□□ -1.4
UBE3B-207ENST00000537063 KRTAP26-1Q6PEX3 210 aa6.27□□□□□ -1.4
UBE3B-207ENST00000537063 H0YGX0 51 aa6.27□□□□□ -1.41
UBE3B-207ENST00000537063 NANOS2P60321 138 aaKnown RBP6.27□□□□□ -1.41
UBE3B-207ENST00000537063 SPAG11BQ08648 103 aa6.26□□□□□ -1.41
UBE3B-207ENST00000537063 WFDC10BQ8IUB3 73 aa6.26□□□□□ -1.41
UBE3B-207ENST00000537063 PKD1L1Q8TDX9 2849 aa6.26□□□□□ -1.41
UBE3B-207ENST00000537063 MAST4O15021 2626 aa6.26□□□□□ -1.41
UBE3B-207ENST00000537063 MT-ATP8P03928 68 aa6.26□□□□□ -1.41
UBE3B-207ENST00000537063 C10orf25Q5T742 122 aa6.25□□□□□ -1.41
UBE3B-207ENST00000537063 BAHCC1Q9P281 2608 aa6.25□□□□□ -1.41
UBE3B-207ENST00000537063 A0A087WYN8 130 aa6.25□□□□□ -1.41
UBE3B-207ENST00000537063 C9orf116Q5BN46 136 aaPredicted RBP6.25□□□□□ -1.41
UBE3B-207ENST00000537063 C6orf223Q8N319 242 aa6.25□□□□□ -1.41
UBE3B-207ENST00000537063 Q8NDZ9 215 aa6.25□□□□□ -1.41
UBE3B-207ENST00000537063 BAALC-AS2P0C853 105 aa6.24□□□□□ -1.41
UBE3B-207ENST00000537063 CYSRT1A8MQ03 144 aa6.24□□□□□ -1.41
UBE3B-207ENST00000537063 ESRGQ1W209 222 aa6.24□□□□□ -1.41
UBE3B-207ENST00000537063 UNQ6190/PRO20217Q6UXQ8 127 aa6.24□□□□□ -1.41
UBE3B-207ENST00000537063 LINC00167Q96N53 147 aa6.24□□□□□ -1.41
UBE3B-207ENST00000537063 TENM3Q9P273 2699 aa6.23□□□□□ -1.41
UBE3B-207ENST00000537063 LINC01556Q5JQF7 62 aa6.23□□□□□ -1.41
UBE3B-207ENST00000537063 C11orf45Q8TAV5 145 aa6.23□□□□□ -1.41
UBE3B-207ENST00000537063 STAB1Q9NY15 2570 aa6.23□□□□□ -1.41
UBE3B-207ENST00000537063 DEFB131BA0A096LNP1 70 aa6.22□□□□□ -1.41
UBE3B-207ENST00000537063 A0A1B0GX51 115 aa6.22□□□□□ -1.41
UBE3B-207ENST00000537063 OR13C6PQ8NH95 151 aa6.22□□□□□ -1.41
UBE3B-207ENST00000537063 OBSCN-AS1Q96MR7 158 aa6.22□□□□□ -1.41
UBE3B-207ENST00000537063 TM2D3Q9BRN9 247 aa6.22□□□□□ -1.41
UBE3B-207ENST00000537063 TMEM126AQ9H061 195 aa6.22□□□□□ -1.41
UBE3B-207ENST00000537063 DNAH1Q9P2D7 4330 aa6.22□□□□□ -1.41
UBE3B-207ENST00000537063 Q9HAA7 133 aa6.22□□□□□ -1.41
UBE3B-207ENST00000537063 C6orf48Q9UBA6 75 aa6.22□□□□□ -1.41
UBE3B-207ENST00000537063 HUWE1Q7Z6Z7 4374 aaKnown RBP6.21□□□□□ -1.41
UBE3B-207ENST00000537063 PRR3P79522 188 aaKnown RBP6.21□□□□□ -1.42
UBE3B-207ENST00000537063 SDIM1Q6ZPB5 146 aa6.21□□□□□ -1.42
UBE3B-207ENST00000537063 ACYP1P07311 99 aa6.2□□□□□ -1.42
UBE3B-207ENST00000537063 C15orf56Q8N910 161 aa6.2□□□□□ -1.42
UBE3B-207ENST00000537063 LINC00526Q96FQ7 95 aa6.2□□□□□ -1.42
UBE3B-207ENST00000537063 LECT2O14960 151 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms