RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 DOPEY2Q9Y3R5 2298 aa7.08□□□□□ -1.28
RFX4-204ENST00000536688 LINC00575Q6W349 94 aa7.08□□□□□ -1.28
RFX4-204ENST00000536688 IGSF10Q6WRI0 2623 aa7.08□□□□□ -1.28
RFX4-204ENST00000536688 A0A087WZ39 114 aa7.08□□□□□ -1.28
RFX4-204ENST00000536688 IGLV1-40P01703 118 aa7.08□□□□□ -1.28
RFX4-204ENST00000536688 LMO4P61968 165 aa7.08□□□□□ -1.28
RFX4-204ENST00000536688 ATMQ13315 3056 aa7.08□□□□□ -1.28
RFX4-204ENST00000536688 MRPL55Q7Z7F7 128 aaKnown RBP7.08□□□□□ -1.28
RFX4-204ENST00000536688 TMEM89A2RUT3 159 aa7.07□□□□□ -1.28
RFX4-204ENST00000536688 IGHV3-11P01762 117 aa7.07□□□□□ -1.28
RFX4-204ENST00000536688 GNLYP22749 145 aa7.07□□□□□ -1.28
RFX4-204ENST00000536688 ZFP36P26651 326 aaKnown RBP7.07□□□□□ -1.28
RFX4-204ENST00000536688 KRTAP21-3Q3LHN1 58 aa7.07□□□□□ -1.28
RFX4-204ENST00000536688 IGHV3OR16-9A0A0B4J2B5 98 aa7.06□□□□□ -1.28
RFX4-204ENST00000536688 SMG1Q96Q15 3661 aaKnown RBP7.06□□□□□ -1.28
RFX4-204ENST00000536688 IGHV4-31P0DP07 118 aa7.06□□□□□ -1.28
RFX4-204ENST00000536688 Q6ZRP5 223 aa7.06□□□□□ -1.28
RFX4-204ENST00000536688 TOMM7Q9P0U1 55 aa7.06□□□□□ -1.28
RFX4-204ENST00000536688 MYO9AB2RTY4 2548 aa7.05□□□□□ -1.28
RFX4-204ENST00000536688 BOD1L1Q8NFC6 3051 aa7.05□□□□□ -1.28
RFX4-204ENST00000536688 LY6HO94772 140 aa7.05□□□□□ -1.28
RFX4-204ENST00000536688 UBE2L6O14933 153 aa7.05□□□□□ -1.28
RFX4-204ENST00000536688 MUC7Q8TAX7 377 aa7.05□□□□□ -1.28
RFX4-204ENST00000536688 PIEZO2Q9H5I5 2752 aa7.05□□□□□ -1.28
RFX4-204ENST00000536688 LCE6AA0A183 80 aa7.04□□□□□ -1.28
RFX4-204ENST00000536688 HECTD1Q9ULT8 2610 aa7.04□□□□□ -1.28
RFX4-204ENST00000536688 TACC2O95359 2948 aa7.03□□□□□ -1.28
RFX4-204ENST00000536688 J3QKU1 62 aa7.03□□□□□ -1.28
RFX4-204ENST00000536688 ZNF843Q8N446 348 aa7.03□□□□□ -1.28
RFX4-204ENST00000536688 COX17Q14061 63 aa7.03□□□□□ -1.28
RFX4-204ENST00000536688 KTN1-AS1Q86SY8 53 aa7.03□□□□□ -1.28
RFX4-204ENST00000536688 PCNX1Q96RV3 2341 aa7.02□□□□□ -1.28
RFX4-204ENST00000536688 M0R2N4 97 aa7.02□□□□□ -1.29
RFX4-204ENST00000536688 DEFB114Q30KQ6 69 aa7.02□□□□□ -1.29
RFX4-204ENST00000536688 ABCA12Q86UK0 2595 aa7.02□□□□□ -1.29
RFX4-204ENST00000536688 BSNQ9UPA5 3926 aa7.02□□□□□ -1.29
RFX4-204ENST00000536688 HTN1P15515 57 aa7.02□□□□□ -1.29
RFX4-204ENST00000536688 CD164L2Q6UWJ8 174 aa7.02□□□□□ -1.29
RFX4-204ENST00000536688 SPATA3Q8NHX4 192 aa7.02□□□□□ -1.29
RFX4-204ENST00000536688 FBN3Q75N90 2809 aa7.02□□□□□ -1.29
RFX4-204ENST00000536688 UBE2BP63146 152 aa7.01□□□□□ -1.29
RFX4-204ENST00000536688 C6orf99Q4VX62 202 aa7.01□□□□□ -1.29
RFX4-204ENST00000536688 C11orf71Q6IPW1 123 aa7.01□□□□□ -1.29
RFX4-204ENST00000536688 Q8IZM0 81 aa7.01□□□□□ -1.29
RFX4-204ENST00000536688 CYP4F30PQ9H0H9 118 aa7.01□□□□□ -1.29
RFX4-204ENST00000536688 RNASE1P07998 156 aaKnown RBP7.01□□□□□ -1.29
RFX4-204ENST00000536688 TRAV22A0A0B4J277 110 aa7□□□□□ -1.29
RFX4-204ENST00000536688 IGKV4-1P06312 121 aa7□□□□□ -1.29
RFX4-204ENST00000536688 SPTA1P02549 2419 aa7□□□□□ -1.29
RFX4-204ENST00000536688 C1orf64Q8NEQ6 169 aa6.99□□□□□ -1.29
RFX4-204ENST00000536688 ESM1Q9NQ30 184 aa6.99□□□□□ -1.29
RFX4-204ENST00000536688 SPTBN1Q01082 2364 aaKnown RBP6.99□□□□□ -1.29
RFX4-204ENST00000536688 FBXL19-AS1Q494R0 122 aa6.99□□□□□ -1.29
RFX4-204ENST00000536688 TLN1Q9Y490 2541 aaKnown RBP6.99□□□□□ -1.29
RFX4-204ENST00000536688 NDUFS5O43920 106 aa6.98□□□□□ -1.29
RFX4-204ENST00000536688 HIGD2AQ9BW72 106 aa6.98□□□□□ -1.29
RFX4-204ENST00000536688 LINC00588Q9Y4M8 146 aa6.98□□□□□ -1.29
RFX4-204ENST00000536688 COL6A6A6NMZ7 2263 aa6.98□□□□□ -1.29
RFX4-204ENST00000536688 CFAP46Q8IYW2 2715 aa6.98□□□□□ -1.29
RFX4-204ENST00000536688 C2CD3Q4AC94 2353 aa6.98□□□□□ -1.29
RFX4-204ENST00000536688 TENM4Q6N022 2769 aa6.98□□□□□ -1.29
RFX4-204ENST00000536688 IGHV4-30-2A0A087WSY4 118 aa6.98□□□□□ -1.29
RFX4-204ENST00000536688 INSP01308 110 aa6.98□□□□□ -1.29
RFX4-204ENST00000536688 RBM12B-AS1Q9P1G2 102 aa6.98□□□□□ -1.29
RFX4-204ENST00000536688 A6NDX4 124 aa6.97□□□□□ -1.29
RFX4-204ENST00000536688 COX7BP24311 80 aa6.97□□□□□ -1.29
RFX4-204ENST00000536688 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.97□□□□□ -1.29
RFX4-204ENST00000536688 STHQ8IWL8 128 aa6.97□□□□□ -1.29
RFX4-204ENST00000536688 ZCCHC13Q8WW36 166 aaKnown RBP6.96□□□□□ -1.29
RFX4-204ENST00000536688 SYCNQ0VAF6 134 aa6.96□□□□□ -1.3
RFX4-204ENST00000536688 SCXQ7RTU7 201 aa6.96□□□□□ -1.3
RFX4-204ENST00000536688 IGHV4-28A0A0C4DH34 117 aa6.95□□□□□ -1.3
RFX4-204ENST00000536688 TRBV6-8A0A0A6YYG3 113 aa6.95□□□□□ -1.3
RFX4-204ENST00000536688 CCL24O00175 119 aa6.95□□□□□ -1.3
RFX4-204ENST00000536688 UBE2AP49459 152 aa6.95□□□□□ -1.3
RFX4-204ENST00000536688 TEX15Q9BXT5 2789 aa6.94□□□□□ -1.3
RFX4-204ENST00000536688 PSCAO43653 123 aa6.94□□□□□ -1.3
RFX4-204ENST00000536688 DEFB131AP59861 70 aa6.94□□□□□ -1.3
RFX4-204ENST00000536688 Q6ZQY7 126 aa6.94□□□□□ -1.3
RFX4-204ENST00000536688 PHF5AQ7RTV0 110 aaKnown RBP6.94□□□□□ -1.3
RFX4-204ENST00000536688 LINC00959A0A1B0GUT2 108 aa6.93□□□□□ -1.3
RFX4-204ENST00000536688 PSPHP1O15172 72 aa6.93□□□□□ -1.3
RFX4-204ENST00000536688 PRM2P04554 102 aa6.93□□□□□ -1.3
RFX4-204ENST00000536688 PRR3P79522 188 aaKnown RBP6.93□□□□□ -1.3
RFX4-204ENST00000536688 M0R378 163 aa6.93□□□□□ -1.3
RFX4-204ENST00000536688 IGLV6-57P01721 117 aa6.93□□□□□ -1.3
RFX4-204ENST00000536688 GRNP28799 593 aaKnown RBP6.93□□□□□ -1.3
RFX4-204ENST00000536688 ATP11AUNQ6ZP68 121 aa6.93□□□□□ -1.3
RFX4-204ENST00000536688 SPTAN1Q13813 2472 aaKnown RBP6.93□□□□□ -1.3
RFX4-204ENST00000536688 TRGV1A0A0A0MS02 117 aa6.92□□□□□ -1.3
RFX4-204ENST00000536688 A0A1B0GW54 56 aa6.92□□□□□ -1.3
RFX4-204ENST00000536688 ZFHX3Q15911 3703 aa6.92□□□□□ -1.3
RFX4-204ENST00000536688 IGLV4-60A0A075B6I1 120 aa6.92□□□□□ -1.3
RFX4-204ENST00000536688 IGHV4-59P01825 116 aa6.92□□□□□ -1.3
RFX4-204ENST00000536688 CELA1Q9UNI1 258 aa6.92□□□□□ -1.3
RFX4-204ENST00000536688 NBASA2RRP1 2371 aa6.92□□□□□ -1.3
RFX4-204ENST00000536688 NDUFB1O75438 58 aa6.91□□□□□ -1.3
RFX4-204ENST00000536688 C4orf48Q5BLP8 95 aa6.91□□□□□ -1.3
RFX4-204ENST00000536688 Q5VV11 94 aa6.91□□□□□ -1.3
RFX4-204ENST00000536688 LINC01356Q8N9X3 169 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms