RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 C9orf85Q96MD7 179 aa9.99□□□□□ -0.81
LIG1-203ENST00000536218 Q9UF83 564 aa9.98□□□□□ -0.81
LIG1-203ENST00000536218 C2CD3Q4AC94 2353 aa9.98□□□□□ -0.81
LIG1-203ENST00000536218 SLPIP03973 132 aa9.98□□□□□ -0.81
LIG1-203ENST00000536218 FAM19A1Q7Z5A9 133 aa9.98□□□□□ -0.81
LIG1-203ENST00000536218 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.98□□□□□ -0.81
LIG1-203ENST00000536218 BRK1Q8WUW1 75 aa9.98□□□□□ -0.81
LIG1-203ENST00000536218 XCL2Q9UBD3 114 aa9.98□□□□□ -0.81
LIG1-203ENST00000536218 FLNBO75369 2602 aaKnown RBP9.97□□□□□ -0.81
LIG1-203ENST00000536218 XCL1P47992 114 aa9.97□□□□□ -0.81
LIG1-203ENST00000536218 CRPP02741 224 aa9.96□□□□□ -0.81
LIG1-203ENST00000536218 SEC61GP60059 68 aa9.96□□□□□ -0.81
LIG1-203ENST00000536218 COX6A2Q02221 97 aa9.96□□□□□ -0.81
LIG1-203ENST00000536218 ENHOQ6UWT2 76 aa9.96□□□□□ -0.82
LIG1-203ENST00000536218 COPS9Q8WXC6 57 aa9.96□□□□□ -0.82
LIG1-203ENST00000536218 ANK3Q12955 4377 aaKnown RBP9.95□□□□□ -0.82
LIG1-203ENST00000536218 LECT2O14960 151 aa9.95□□□□□ -0.82
LIG1-203ENST00000536218 LINC00467Q9BRT7 94 aa9.95□□□□□ -0.82
LIG1-203ENST00000536218 SERP1Q9Y6X1 66 aa9.95□□□□□ -0.82
LIG1-203ENST00000536218 NDUFC2-KCTD14E9PQ53 114 aa9.94□□□□□ -0.82
LIG1-203ENST00000536218 ODF3L2Q3SX64 289 aa9.94□□□□□ -0.82
LIG1-203ENST00000536218 V9GYY9 64 aa9.93□□□□□ -0.82
LIG1-203ENST00000536218 STHQ8IWL8 128 aa9.93□□□□□ -0.82
LIG1-203ENST00000536218 RNASE1P07998 156 aaKnown RBP9.93□□□□□ -0.82
LIG1-203ENST00000536218 SNURFQ9Y675 71 aa9.93□□□□□ -0.82
LIG1-203ENST00000536218 WFDC10AQ9H1F0 79 aa9.92□□□□□ -0.82
LIG1-203ENST00000536218 TRAV13-2A0A0B4J235 113 aa9.91□□□□□ -0.82
LIG1-203ENST00000536218 LINC00337Q8N6G1 96 aa9.91□□□□□ -0.82
LIG1-203ENST00000536218 CHCHD7Q9BUK0 85 aa9.91□□□□□ -0.82
LIG1-203ENST00000536218 RPL36AP83881 106 aaKnown RBP9.91□□□□□ -0.82
LIG1-203ENST00000536218 C1orf195Q5TG92 126 aa9.91□□□□□ -0.82
LIG1-203ENST00000536218 SMIM11BQ8TCY0 68 aa9.91□□□□□ -0.82
LIG1-203ENST00000536218 RPL36ALQ969Q0 106 aaKnown RBP9.91□□□□□ -0.82
LIG1-203ENST00000536218 LINC00474Q9P2X8 69 aa9.91□□□□□ -0.82
LIG1-203ENST00000536218 MIR7-3HGQ8N6C7 128 aa9.9□□□□□ -0.82
LIG1-203ENST00000536218 RBM3P98179 157 aaKnown RBP9.9□□□□□ -0.82
LIG1-203ENST00000536218 OTOGQ6ZRI0 2925 aa9.9□□□□□ -0.83
LIG1-203ENST00000536218 LY6G6DO95868 133 aa9.89□□□□□ -0.83
LIG1-203ENST00000536218 H7BZZ5 65 aa9.89□□□□□ -0.83
LIG1-203ENST00000536218 INSP01308 110 aa9.89□□□□□ -0.83
LIG1-203ENST00000536218 FP248Q71RG6 208 aaPredicted RBP9.89□□□□□ -0.83
LIG1-203ENST00000536218 OVOL2Q9BRP0 275 aa9.89□□□□□ -0.83
LIG1-203ENST00000536218 SND1-IT1Q9HBX3 110 aa9.89□□□□□ -0.83
LIG1-203ENST00000536218 SMIM26A0A096LP01 95 aa9.88□□□□□ -0.83
LIG1-203ENST00000536218 Q6ZSN1 163 aa9.88□□□□□ -0.83
LIG1-203ENST00000536218 LINC00242Q5T6M2 205 aa9.87□□□□□ -0.83
LIG1-203ENST00000536218 RMI2Q96E14 147 aa9.87□□□□□ -0.83
LIG1-203ENST00000536218 A8MTW9 85 aa9.87□□□□□ -0.83
LIG1-203ENST00000536218 SMIM1B2RUZ4 78 aa9.87□□□□□ -0.83
LIG1-203ENST00000536218 TOMM7Q9P0U1 55 aa9.87□□□□□ -0.83
LIG1-203ENST00000536218 LYPD5Q6UWN5 251 aa9.86□□□□□ -0.83
LIG1-203ENST00000536218 C16orf95Q9H693 158 aa9.86□□□□□ -0.83
LIG1-203ENST00000536218 IGLV5-39A0A0G2JS06 123 aa9.86□□□□□ -0.83
LIG1-203ENST00000536218 S100A7L2Q5SY68 101 aa9.86□□□□□ -0.83
LIG1-203ENST00000536218 F8WEM9 126 aa9.85□□□□□ -0.83
LIG1-203ENST00000536218 IGHV3-53P01767 116 aa9.85□□□□□ -0.83
LIG1-203ENST00000536218 CCKP06307 115 aa9.85□□□□□ -0.83
LIG1-203ENST00000536218 C1orf158Q8N1D5 194 aa9.85□□□□□ -0.83
LIG1-203ENST00000536218 INAFM1C9JVW0 142 aa9.85□□□□□ -0.83
LIG1-203ENST00000536218 LINC00158P58513 81 aa9.85□□□□□ -0.83
LIG1-203ENST00000536218 IGKV2-28A0A075B6P5 120 aa9.85□□□□□ -0.83
LIG1-203ENST00000536218 TRGV1A0A0A0MS02 117 aa9.85□□□□□ -0.83
LIG1-203ENST00000536218 IGKV2D-28P01615 120 aa9.85□□□□□ -0.83
LIG1-203ENST00000536218 C11orf72Q8NBR9 251 aa9.85□□□□□ -0.83
LIG1-203ENST00000536218 MPLKIPQ8TAP9 179 aa9.84□□□□□ -0.83
LIG1-203ENST00000536218 OBSCN-AS1Q96MR7 158 aa9.84□□□□□ -0.83
LIG1-203ENST00000536218 ORMDL1Q9P0S3 153 aa9.84□□□□□ -0.83
LIG1-203ENST00000536218 IGLV5-45A0A087WSX0 123 aa9.83□□□□□ -0.84
LIG1-203ENST00000536218 H0YGX0 51 aa9.83□□□□□ -0.84
LIG1-203ENST00000536218 PF4P02776 101 aa9.83□□□□□ -0.84
LIG1-203ENST00000536218 SS18Q15532 418 aa9.83□□□□□ -0.84
LIG1-203ENST00000536218 KRTAP10-3P60369 221 aa9.83□□□□□ -0.84
LIG1-203ENST00000536218 UBL5Q9BZL1 73 aa9.83□□□□□ -0.84
LIG1-203ENST00000536218 PAX4O43316 350 aa9.82□□□□□ -0.84
LIG1-203ENST00000536218 HIVEP1P15822 2718 aa9.82□□□□□ -0.84
LIG1-203ENST00000536218 TRBV7-6A0A0J9YX20 115 aa9.82□□□□□ -0.84
LIG1-203ENST00000536218 EPM2AB3EWF7 344 aa9.82□□□□□ -0.84
LIG1-203ENST00000536218 ATRQ13535 2644 aa9.81□□□□□ -0.84
LIG1-203ENST00000536218 TEP1Q99973 2627 aaKnown RBP9.81□□□□□ -0.84
LIG1-203ENST00000536218 NBEAL2Q6ZNJ1 2754 aa9.81□□□□□ -0.84
LIG1-203ENST00000536218 IGKV3OR2-268A0A0C4DH90 116 aa9.81□□□□□ -0.84
LIG1-203ENST00000536218 Q6ZTI0 123 aa9.81□□□□□ -0.84
LIG1-203ENST00000536218 VWFP04275 2813 aa9.81□□□□□ -0.84
LIG1-203ENST00000536218 IGLV1-51P01701 117 aa9.8□□□□□ -0.84
LIG1-203ENST00000536218 ATP5EP2Q5VTU8 51 aa9.8□□□□□ -0.84
LIG1-203ENST00000536218 NSD1Q96L73 2696 aaPredicted RBP9.8□□□□□ -0.84
LIG1-203ENST00000536218 TRAV7A0A075B6U4 112 aa9.8□□□□□ -0.84
LIG1-203ENST00000536218 NOP10Q9NPE3 64 aaKnown RBP9.8□□□□□ -0.84
LIG1-203ENST00000536218 HAMPP81172 84 aa9.79□□□□□ -0.84
LIG1-203ENST00000536218 TRAV10A0A0B4J240 114 aa9.78□□□□□ -0.84
LIG1-203ENST00000536218 LINC00482Q8N8I6 264 aa9.78□□□□□ -0.84
LIG1-203ENST00000536218 GIG44P09565 113 aaPredicted RBP9.77□□□□□ -0.84
LIG1-203ENST00000536218 CCL18P55774 89 aa9.77□□□□□ -0.84
LIG1-203ENST00000536218 TENM1Q9UKZ4 2725 aa9.77□□□□□ -0.85
LIG1-203ENST00000536218 SPATA3Q8NHX4 192 aa9.77□□□□□ -0.85
LIG1-203ENST00000536218 C19orf73Q9NVV2 129 aa9.76□□□□□ -0.85
LIG1-203ENST00000536218 C11orf68Q9H3H3 251 aaKnown RBP9.75□□□□□ -0.85
LIG1-203ENST00000536218 TRGV2A0A075B6R0 118 aa9.75□□□□□ -0.85
LIG1-203ENST00000536218 JMJD7-PLA2G4BH0Y9G9 81 aa9.75□□□□□ -0.85
LIG1-203ENST00000536218 KLKP1Q107X0 134 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms