RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 C10orf25Q5T742 122 aa5.89□□□□□ -1.47
CDCA3-204ENST00000535406 UNQ6190/PRO20217Q6UXQ8 127 aa5.89□□□□□ -1.47
CDCA3-204ENST00000535406 FAM19A3Q7Z5A8 133 aa5.89□□□□□ -1.47
CDCA3-204ENST00000535406 LINC01561Q8N1V8 128 aa5.89□□□□□ -1.47
CDCA3-204ENST00000535406 SCGB3A1Q96QR1 104 aa5.89□□□□□ -1.47
CDCA3-204ENST00000535406 TRBV30A0A0K0K1B3 111 aa5.88□□□□□ -1.47
CDCA3-204ENST00000535406 A0A1W2PNN7 141 aa5.88□□□□□ -1.47
CDCA3-204ENST00000535406 LINC01549A6NIU2 74 aa5.88□□□□□ -1.47
CDCA3-204ENST00000535406 APOC3P02656 99 aa5.88□□□□□ -1.47
CDCA3-204ENST00000535406 PRSS2P07478 247 aa5.88□□□□□ -1.47
CDCA3-204ENST00000535406 TLX1NBP0CAT3 122 aa5.88□□□□□ -1.47
CDCA3-204ENST00000535406 NDUFA5Q16718 116 aa5.88□□□□□ -1.47
CDCA3-204ENST00000535406 Q6ZRP5 223 aa5.88□□□□□ -1.47
CDCA3-204ENST00000535406 FA2HQ7L5A8 372 aa5.88□□□□□ -1.47
CDCA3-204ENST00000535406 ERASQ7Z444 233 aa5.88□□□□□ -1.47
CDCA3-204ENST00000535406 PACRGQ96M98 296 aaPredicted RBP5.88□□□□□ -1.47
CDCA3-204ENST00000535406 GEMIN7Q9H840 131 aaKnown RBP5.88□□□□□ -1.47
CDCA3-204ENST00000535406 SMCO4Q9NRQ5 59 aa5.88□□□□□ -1.47
CDCA3-204ENST00000535406 LINC01546A6NGU7 62 aa5.87□□□□□ -1.47
CDCA3-204ENST00000535406 SNAPINO95295 136 aa5.87□□□□□ -1.47
CDCA3-204ENST00000535406 C2orf82Q6UX34 121 aa5.87□□□□□ -1.47
CDCA3-204ENST00000535406 SVBPQ8N300 66 aa5.87□□□□□ -1.47
CDCA3-204ENST00000535406 TOMM7Q9P0U1 55 aa5.87□□□□□ -1.47
CDCA3-204ENST00000535406 CDKN2A-AS1Q9UH64 79 aa5.87□□□□□ -1.47
CDCA3-204ENST00000535406 CKS1BP61024 79 aa5.86□□□□□ -1.47
CDCA3-204ENST00000535406 GAGE2EQ4V326 116 aa5.86□□□□□ -1.47
CDCA3-204ENST00000535406 Q8IZM0 81 aa5.86□□□□□ -1.47
CDCA3-204ENST00000535406 LINC00469Q8N7U9 141 aa5.86□□□□□ -1.47
CDCA3-204ENST00000535406 GAGE2DQ9UEU5 116 aa5.86□□□□□ -1.47
CDCA3-204ENST00000535406 GAGE10A6NGK3 116 aa5.85□□□□□ -1.47
CDCA3-204ENST00000535406 NDUFC2-KCTD14E9PQ53 114 aa5.85□□□□□ -1.47
CDCA3-204ENST00000535406 C6orf226Q5I0X4 101 aa5.85□□□□□ -1.47
CDCA3-204ENST00000535406 SERTAD4-AS1Q5TG53 156 aa5.85□□□□□ -1.47
CDCA3-204ENST00000535406 PHF5AQ7RTV0 110 aaKnown RBP5.85□□□□□ -1.47
CDCA3-204ENST00000535406 FAM19A5Q7Z5A7 132 aaPredicted RBP5.85□□□□□ -1.47
CDCA3-204ENST00000535406 TRAPPC1Q9Y5R8 145 aa5.85□□□□□ -1.47
CDCA3-204ENST00000535406 TINCRA0A1B0GVN0 87 aa5.84□□□□□ -1.47
CDCA3-204ENST00000535406 FAM168BA1KXE4 195 aa5.84□□□□□ -1.47
CDCA3-204ENST00000535406 MT1HL1P0DM35 61 aa5.84□□□□□ -1.47
CDCA3-204ENST00000535406 SPINK6Q6UWN8 80 aa5.84□□□□□ -1.47
CDCA3-204ENST00000535406 SMIM1B2RUZ4 78 aa5.83□□□□□ -1.48
CDCA3-204ENST00000535406 CXCL5P42830 114 aa5.83□□□□□ -1.48
CDCA3-204ENST00000535406 PMVKQ15126 192 aa5.83□□□□□ -1.48
CDCA3-204ENST00000535406 C18orf32Q8TCD1 76 aa5.83□□□□□ -1.48
CDCA3-204ENST00000535406 CST9LQ9H4G1 147 aa5.83□□□□□ -1.48
CDCA3-204ENST00000535406 PSORS1C2Q9UIG4 136 aa5.83□□□□□ -1.48
CDCA3-204ENST00000535406 IGLV5-45A0A087WSX0 123 aa5.82□□□□□ -1.48
CDCA3-204ENST00000535406 F8VRH5 84 aa5.82□□□□□ -1.48
CDCA3-204ENST00000535406 M0QXV9 152 aa5.82□□□□□ -1.48
CDCA3-204ENST00000535406 C1orf137Q5JT78 98 aa5.82□□□□□ -1.48
CDCA3-204ENST00000535406 REG3GQ6UW15 175 aa5.82□□□□□ -1.48
CDCA3-204ENST00000535406 A0A096LNJ9 63 aa5.81□□□□□ -1.48
CDCA3-204ENST00000535406 HBDP02042 147 aa5.81□□□□□ -1.48
CDCA3-204ENST00000535406 LINC00614P0C842 121 aa5.81□□□□□ -1.48
CDCA3-204ENST00000535406 SRSF9Q13242 221 aaKnown RBP eCLIP5.81□□□□□ -1.48
CDCA3-204ENST00000535406 PDZD11Q5EBL8 140 aa5.81□□□□□ -1.48
CDCA3-204ENST00000535406 C9orf129Q5T035 196 aaKnown RBP5.81□□□□□ -1.48
CDCA3-204ENST00000535406 URB1-AS1Q96HZ7 61 aa5.81□□□□□ -1.48
CDCA3-204ENST00000535406 LINC01600Q96MT4 127 aa5.81□□□□□ -1.48
CDCA3-204ENST00000535406 TNXBP22105 4242 aa5.8□□□□□ -1.48
CDCA3-204ENST00000535406 HMCN2Q8NDA2 5059 aa5.8□□□□□ -1.48
CDCA3-204ENST00000535406 H3BRM9 83 aa5.8□□□□□ -1.48
CDCA3-204ENST00000535406 SPINK8P0C7L1 97 aa5.8□□□□□ -1.48
CDCA3-204ENST00000535406 NDUFA6P56556 154 aa5.8□□□□□ -1.48
CDCA3-204ENST00000535406 RAB5BP61020 215 aa5.8□□□□□ -1.48
CDCA3-204ENST00000535406 UBE2BP63146 152 aa5.8□□□□□ -1.48
CDCA3-204ENST00000535406 PMCHL1Q16048 86 aa5.8□□□□□ -1.48
CDCA3-204ENST00000535406 COX7B2Q8TF08 81 aa5.8□□□□□ -1.48
CDCA3-204ENST00000535406 IGLC3P0DOY3 106 aa5.79□□□□□ -1.48
CDCA3-204ENST00000535406 KRTAP7-1Q8IUC3 87 aa5.79□□□□□ -1.48
CDCA3-204ENST00000535406 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
CDCA3-204ENST00000535406 XAGE1AQ9HD64 81 aa5.79□□□□□ -1.48
CDCA3-204ENST00000535406 ATP5LO75964 103 aa5.78□□□□□ -1.48
CDCA3-204ENST00000535406 IGLV7-43P04211 117 aa5.78□□□□□ -1.48
CDCA3-204ENST00000535406 KRTAP11-1Q8IUC1 163 aa5.78□□□□□ -1.48
CDCA3-204ENST00000535406 YPEL4Q96NS1 127 aa5.78□□□□□ -1.48
CDCA3-204ENST00000535406 ZNF22P17026 224 aaPredicted RBP5.77□□□□□ -1.49
CDCA3-204ENST00000535406 CBLN2Q8IUK8 224 aa5.77□□□□□ -1.49
CDCA3-204ENST00000535406 DIRC1Q969H9 104 aa5.76□□□□□ -1.49
CDCA3-204ENST00000535406 IGLV5-39A0A0G2JS06 123 aa5.75□□□□□ -1.49
CDCA3-204ENST00000535406 LBHQ53QV2 105 aaPredicted RBP5.75□□□□□ -1.49
CDCA3-204ENST00000535406 BAGE3Q86Y29 109 aa5.75□□□□□ -1.49
CDCA3-204ENST00000535406 CHCHD1Q96BP2 118 aaKnown RBP5.75□□□□□ -1.49
CDCA3-204ENST00000535406 C22orf24Q9Y442 160 aa5.75□□□□□ -1.49
CDCA3-204ENST00000535406 C11orf86A6NJI1 115 aa5.74□□□□□ -1.49
CDCA3-204ENST00000535406 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.74□□□□□ -1.49
CDCA3-204ENST00000535406 H0Y9J4 135 aa5.74□□□□□ -1.49
CDCA3-204ENST00000535406 TMEM170BQ5T4T1 132 aa5.74□□□□□ -1.49
CDCA3-204ENST00000535406 MRPL55Q7Z7F7 128 aaKnown RBP5.74□□□□□ -1.49
CDCA3-204ENST00000535406 TP73-AS1Q9UF72 201 aa5.74□□□□□ -1.49
CDCA3-204ENST00000535406 NUPR1O60356 82 aa5.74□□□□□ -1.49
CDCA3-204ENST00000535406 HSBP1O75506 76 aa5.74□□□□□ -1.49
CDCA3-204ENST00000535406 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
CDCA3-204ENST00000535406 CHTOPQ9Y3Y2 248 aaKnown RBP5.74□□□□□ -1.49
CDCA3-204ENST00000535406 TRGC2P03986 189 aa5.73□□□□□ -1.49
CDCA3-204ENST00000535406 PFN2P35080 140 aa5.73□□□□□ -1.49
CDCA3-204ENST00000535406 XP32Q5T750 250 aa5.73□□□□□ -1.49
CDCA3-204ENST00000535406 SFTA2Q6UW10 78 aa5.73□□□□□ -1.49
CDCA3-204ENST00000535406 IFI27L1Q96BM0 104 aa5.73□□□□□ -1.49
CDCA3-204ENST00000535406 ERG28Q9UKR5 140 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms