RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 RPL28P46779 137 aaKnown RBP11.24□□□□□ -0.61
MCF2L-232ENST00000535094 LRRC75A-AS1Q8N1F1 130 aa11.24□□□□□ -0.61
MCF2L-232ENST00000535094 F5H768 121 aa11.24□□□□□ -0.61
MCF2L-232ENST00000535094 COX7CP15954 63 aa11.24□□□□□ -0.61
MCF2L-232ENST00000535094 C16orf74Q96GX8 76 aa11.24□□□□□ -0.61
MCF2L-232ENST00000535094 IGKV2-28A0A075B6P5 120 aa11.23□□□□□ -0.61
MCF2L-232ENST00000535094 IGKV2D-28P01615 120 aa11.23□□□□□ -0.61
MCF2L-232ENST00000535094 F8P00451 2351 aa11.23□□□□□ -0.61
MCF2L-232ENST00000535094 C9orf116Q5BN46 136 aaPredicted RBP11.23□□□□□ -0.61
MCF2L-232ENST00000535094 SETXQ7Z333 2677 aaKnown RBP11.22□□□□□ -0.61
MCF2L-232ENST00000535094 DEFB113Q30KQ7 82 aa11.22□□□□□ -0.61
MCF2L-232ENST00000535094 DEFB121Q5J5C9 76 aa11.22□□□□□ -0.61
MCF2L-232ENST00000535094 HECTD1Q9ULT8 2610 aa11.22□□□□□ -0.61
MCF2L-232ENST00000535094 DNAJC9-AS1A6NH13 148 aa11.21□□□□□ -0.61
MCF2L-232ENST00000535094 USP17L23D6RBM5 183 aa11.21□□□□□ -0.61
MCF2L-232ENST00000535094 LINC00269Q8N2A0 174 aa11.21□□□□□ -0.61
MCF2L-232ENST00000535094 DSCR8Q96T75 97 aa11.21□□□□□ -0.61
MCF2L-232ENST00000535094 ENHOQ6UWT2 76 aa11.21□□□□□ -0.62
MCF2L-232ENST00000535094 HILS1P60008 231 aa11.2□□□□□ -0.62
MCF2L-232ENST00000535094 A8MTW9 85 aa11.2□□□□□ -0.62
MCF2L-232ENST00000535094 IBA57-AS1B1ANH7 110 aa11.2□□□□□ -0.62
MCF2L-232ENST00000535094 J3KT08 172 aa11.2□□□□□ -0.62
MCF2L-232ENST00000535094 RPL18AQ02543 176 aaKnown RBP11.2□□□□□ -0.62
MCF2L-232ENST00000535094 UBL5Q9BZL1 73 aa11.2□□□□□ -0.62
MCF2L-232ENST00000535094 LINC00959A0A1B0GUT2 108 aa11.19□□□□□ -0.62
MCF2L-232ENST00000535094 CSDC2Q9Y534 153 aaKnown RBP11.19□□□□□ -0.62
MCF2L-232ENST00000535094 GHRHP01286 108 aa11.18□□□□□ -0.62
MCF2L-232ENST00000535094 C6orf99Q4VX62 202 aa11.18□□□□□ -0.62
MCF2L-232ENST00000535094 FAM222AQ5U5X8 452 aa11.18□□□□□ -0.62
MCF2L-232ENST00000535094 APCP25054 2843 aa11.17□□□□□ -0.62
MCF2L-232ENST00000535094 C20orf197Q8N268 126 aa11.17□□□□□ -0.62
MCF2L-232ENST00000535094 ATRQ13535 2644 aa11.16□□□□□ -0.62
MCF2L-232ENST00000535094 TRBV6-4A0A1B0GX49 114 aa11.16□□□□□ -0.62
MCF2L-232ENST00000535094 IGHV3OR16-9A0A0B4J2B5 98 aa11.16□□□□□ -0.62
MCF2L-232ENST00000535094 FAM19A1Q7Z5A9 133 aa11.16□□□□□ -0.62
MCF2L-232ENST00000535094 BBC3Q96PG8 261 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-232ENST00000535094 KIR2DL5BQ8NHK3 375 aa11.15□□□□□ -0.62
MCF2L-232ENST00000535094 TRAV25A0A0B4J276 109 aa11.15□□□□□ -0.63
MCF2L-232ENST00000535094 FAM19A5Q7Z5A7 132 aaPredicted RBP11.14□□□□□ -0.63
MCF2L-232ENST00000535094 USP24Q9UPU5 2620 aa11.14□□□□□ -0.63
MCF2L-232ENST00000535094 A0A087WZ39 114 aa11.14□□□□□ -0.63
MCF2L-232ENST00000535094 SCXQ7RTU7 201 aa11.14□□□□□ -0.63
MCF2L-232ENST00000535094 SERP2Q8N6R1 65 aa11.14□□□□□ -0.63
MCF2L-232ENST00000535094 FHL2Q14192 279 aa11.13□□□□□ -0.63
MCF2L-232ENST00000535094 Q8N3U1 123 aa11.12□□□□□ -0.63
MCF2L-232ENST00000535094 LINC00482Q8N8I6 264 aa11.12□□□□□ -0.63
MCF2L-232ENST00000535094 DEFB135Q30KP9 77 aa11.11□□□□□ -0.63
MCF2L-232ENST00000535094 LINC01600Q96MT4 127 aa11.11□□□□□ -0.63
MCF2L-232ENST00000535094 XAGE1AQ9HD64 81 aa11.11□□□□□ -0.63
MCF2L-232ENST00000535094 UNC79Q9P2D8 2635 aa11.1□□□□□ -0.63
MCF2L-232ENST00000535094 CHCHD10Q8WYQ3 142 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-232ENST00000535094 TMEM256-PLSCR3K7ERE1 68 aa11.1□□□□□ -0.63
MCF2L-232ENST00000535094 CMC4P56277 68 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-232ENST00000535094 UPK3BQ9BT76 320 aa11.1□□□□□ -0.63
MCF2L-232ENST00000535094 JMJD7-PLA2G4BH0Y9G9 81 aa11.09□□□□□ -0.63
MCF2L-232ENST00000535094 Q6JHZ5 121 aa11.09□□□□□ -0.63
MCF2L-232ENST00000535094 RBM3P98179 157 aaKnown RBP11.08□□□□□ -0.63
MCF2L-232ENST00000535094 DAD1P61803 113 aa11.08□□□□□ -0.64
MCF2L-232ENST00000535094 LINC01006Q8NI28 216 aa11.08□□□□□ -0.64
MCF2L-232ENST00000535094 KLK12Q9UKR0 248 aa11.08□□□□□ -0.64
MCF2L-232ENST00000535094 C22orf24Q9Y442 160 aa11.08□□□□□ -0.64
MCF2L-232ENST00000535094 Q8N814 137 aa11.07□□□□□ -0.64
MCF2L-232ENST00000535094 CCKP06307 115 aa11.07□□□□□ -0.64
MCF2L-232ENST00000535094 CYSTM1Q9H1C7 97 aa11.07□□□□□ -0.64
MCF2L-232ENST00000535094 PRO0255Q9UI72 69 aa11.07□□□□□ -0.64
MCF2L-232ENST00000535094 REG3AQ06141 175 aa11.06□□□□□ -0.64
MCF2L-232ENST00000535094 SPAG11BQ08648 103 aa11.06□□□□□ -0.64
MCF2L-232ENST00000535094 C6orf223Q8N319 242 aa11.06□□□□□ -0.64
MCF2L-232ENST00000535094 CR1P17927 2039 aa11.06□□□□□ -0.64
MCF2L-232ENST00000535094 UBR5O95071 2799 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-232ENST00000535094 UNQ6190/PRO20217Q6UXQ8 127 aa11.05□□□□□ -0.64
MCF2L-232ENST00000535094 LINC01561Q8N1V8 128 aa11.05□□□□□ -0.64
MCF2L-232ENST00000535094 SNURFQ9Y675 71 aa11.05□□□□□ -0.64
MCF2L-232ENST00000535094 Q6ZQY7 126 aa11.05□□□□□ -0.64
MCF2L-232ENST00000535094 GIG44P09565 113 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-232ENST00000535094 HELZ2Q9BYK8 2649 aaKnown RBP11.04□□□□□ -0.64
MCF2L-232ENST00000535094 A0A096LNT2 108 aa11.03□□□□□ -0.64
MCF2L-232ENST00000535094 ITPR2Q14571 2701 aa11.03□□□□□ -0.64
MCF2L-232ENST00000535094 SMIM9A6NGZ8 99 aa11.02□□□□□ -0.65
MCF2L-232ENST00000535094 CRYGAP11844 174 aa11.02□□□□□ -0.65
MCF2L-232ENST00000535094 HRCT1Q6UXD1 115 aa11.02□□□□□ -0.65
MCF2L-232ENST00000535094 Q8IZM0 81 aa11.02□□□□□ -0.65
MCF2L-232ENST00000535094 HIGD2BQ4VC39 106 aa11.01□□□□□ -0.65
MCF2L-232ENST00000535094 PLAC8L1A1L4L8 177 aa11□□□□□ -0.65
MCF2L-232ENST00000535094 DEFB105AQ8NG35 78 aa11□□□□□ -0.65
MCF2L-232ENST00000535094 TMEM258P61165 79 aa11□□□□□ -0.65
MCF2L-232ENST00000535094 C2orf48Q96LS8 159 aa10.99□□□□□ -0.65
MCF2L-232ENST00000535094 FLNBO75369 2602 aaKnown RBP10.99□□□□□ -0.65
MCF2L-232ENST00000535094 FSHBP01225 129 aa10.99□□□□□ -0.65
MCF2L-232ENST00000535094 IGLV1-51P01701 117 aa10.99□□□□□ -0.65
MCF2L-232ENST00000535094 CD164L2Q6UWJ8 174 aa10.99□□□□□ -0.65
MCF2L-232ENST00000535094 SMR3AQ99954 134 aa10.99□□□□□ -0.65
MCF2L-232ENST00000535094 TEP1Q99973 2627 aaKnown RBP10.99□□□□□ -0.65
MCF2L-232ENST00000535094 FAM19A3Q7Z5A8 133 aa10.98□□□□□ -0.65
MCF2L-232ENST00000535094 ZNF843Q8N446 348 aa10.98□□□□□ -0.65
MCF2L-232ENST00000535094 IL17DQ8TAD2 202 aa10.98□□□□□ -0.65
MCF2L-232ENST00000535094 C10orf25Q5T742 122 aa10.98□□□□□ -0.65
MCF2L-232ENST00000535094 ZNF561-AS1K7EIQ3 104 aa10.97□□□□□ -0.65
MCF2L-232ENST00000535094 CYSRT1A8MQ03 144 aa10.96□□□□□ -0.65
MCF2L-232ENST00000535094 C5orf47Q569G3 176 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms