RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 QRICH2Q9H0J4 1663 aa-1.71□□□□□ -2.68
COPB1-212ENST00000534771 PPIP5K1Q6PFW1 1433 aa-1.72□□□□□ -2.68
COPB1-212ENST00000534771 BTAF1O14981 1849 aa-1.72□□□□□ -2.68
COPB1-212ENST00000534771 DOCK2Q92608 1830 aa-1.72□□□□□ -2.68
COPB1-212ENST00000534771 TRAV13-2A0A0B4J235 113 aa-1.72□□□□□ -2.68
COPB1-212ENST00000534771 MGPP08493 103 aa-1.72□□□□□ -2.68
COPB1-212ENST00000534771 BTG2P78543 158 aa-1.72□□□□□ -2.68
COPB1-212ENST00000534771 TMEM35BQ8NCS4 154 aa-1.72□□□□□ -2.68
COPB1-212ENST00000534771 FDCSPQ8NFU4 85 aa-1.72□□□□□ -2.68
COPB1-212ENST00000534771 HOPXQ9BPY8 73 aaPredicted RBP-1.72□□□□□ -2.68
COPB1-212ENST00000534771 BOLA2Q9H3K6 86 aa-1.72□□□□□ -2.68
COPB1-212ENST00000534771 ATPIF1Q9UII2 106 aa-1.72□□□□□ -2.68
COPB1-212ENST00000534771 SYNJ1O43426 1573 aa-1.72□□□□□ -2.69
COPB1-212ENST00000534771 ROCK1Q13464 1354 aa-1.72□□□□□ -2.69
COPB1-212ENST00000534771 XRN1Q8IZH2 1706 aaKnown RBP-1.73□□□□□ -2.69
COPB1-212ENST00000534771 IGLC7A0M8Q6 106 aa-1.73□□□□□ -2.69
COPB1-212ENST00000534771 HCG22E2RYF7 251 aa-1.73□□□□□ -2.69
COPB1-212ENST00000534771 I3L3M4 83 aa-1.73□□□□□ -2.69
COPB1-212ENST00000534771 M0R129 80 aa-1.73□□□□□ -2.69
COPB1-212ENST00000534771 E2F6O75461 281 aa-1.73□□□□□ -2.69
COPB1-212ENST00000534771 SNCGO76070 127 aa-1.73□□□□□ -2.69
COPB1-212ENST00000534771 NCS1P62166 190 aa-1.73□□□□□ -2.69
COPB1-212ENST00000534771 SAMD13Q5VXD3 122 aa-1.73□□□□□ -2.69
COPB1-212ENST00000534771 TOMM20LQ6UXN7 152 aa-1.73□□□□□ -2.69
COPB1-212ENST00000534771 AKAP14Q86UN6 197 aa-1.73□□□□□ -2.69
COPB1-212ENST00000534771 TAC4Q86UU9 113 aa-1.73□□□□□ -2.69
COPB1-212ENST00000534771 TCTE3Q8IZS6 198 aa-1.73□□□□□ -2.69
COPB1-212ENST00000534771 TTC9CQ8N5M4 171 aa-1.73□□□□□ -2.69
COPB1-212ENST00000534771 SPTSSAQ969W0 71 aa-1.73□□□□□ -2.69
COPB1-212ENST00000534771 ARAP2Q8WZ64 1704 aa-1.74□□□□□ -2.69
COPB1-212ENST00000534771 NDUFB6O95139 128 aa-1.74□□□□□ -2.69
COPB1-212ENST00000534771 SFT2D2O95562 160 aa-1.74□□□□□ -2.69
COPB1-212ENST00000534771 LELP1Q5T871 98 aa-1.74□□□□□ -2.69
COPB1-212ENST00000534771 TRIQKQ629K1 86 aa-1.74□□□□□ -2.69
COPB1-212ENST00000534771 LINC01600Q96MT4 127 aa-1.74□□□□□ -2.69
COPB1-212ENST00000534771 PSMG3Q9BT73 122 aaPredicted RBP-1.74□□□□□ -2.69
COPB1-212ENST00000534771 CDC42SE2Q9NRR3 84 aa-1.74□□□□□ -2.69
COPB1-212ENST00000534771 CRIPTQ9P021 101 aa-1.74□□□□□ -2.69
COPB1-212ENST00000534771 MYH13Q9UKX3 1938 aa-1.74□□□□□ -2.69
COPB1-212ENST00000534771 ZNF518AQ6AHZ1 1483 aa-1.75□□□□□ -2.69
COPB1-212ENST00000534771 MAGI2Q86UL8 1455 aa-1.75□□□□□ -2.69
COPB1-212ENST00000534771 TRAV30A0A087WSZ9 112 aa-1.75□□□□□ -2.69
COPB1-212ENST00000534771 HEPN1Q6WQI6 88 aa-1.75□□□□□ -2.69
COPB1-212ENST00000534771 Q6ZUT4 128 aa-1.75□□□□□ -2.69
COPB1-212ENST00000534771 DYNLRB1Q9NP97 96 aa-1.75□□□□□ -2.69
COPB1-212ENST00000534771 MYOM1P52179 1685 aa-1.75□□□□□ -2.69
COPB1-212ENST00000534771 CENPFP49454 3210 aa-1.76□□□□□ -2.69
COPB1-212ENST00000534771 TRAV36DV7A0A075B6V5 113 aa-1.76□□□□□ -2.69
COPB1-212ENST00000534771 SCTP09683 121 aa-1.76□□□□□ -2.69
COPB1-212ENST00000534771 UBA52P62987 128 aaKnown RBP-1.76□□□□□ -2.69
COPB1-212ENST00000534771 WFDC13Q8IUB5 93 aa-1.76□□□□□ -2.69
COPB1-212ENST00000534771 FAM167A-AS1Q96KT0 104 aa-1.76□□□□□ -2.69
COPB1-212ENST00000534771 SPRR4Q96PI1 79 aa-1.76□□□□□ -2.69
COPB1-212ENST00000534771 MGST2Q99735 147 aa-1.76□□□□□ -2.69
COPB1-212ENST00000534771 HIGD1AQ9Y241 93 aa-1.76□□□□□ -2.69
COPB1-212ENST00000534771 ANKRD30AQ9BXX3 1397 aa-1.76□□□□□ -2.69
COPB1-212ENST00000534771 PRG4Q92954 1404 aaPredicted RBP-1.76□□□□□ -2.69
COPB1-212ENST00000534771 C1orf167Q5SNV9 1468 aa-1.76□□□□□ -2.69
COPB1-212ENST00000534771 HMGN4O00479 90 aa-1.77□□□□□ -2.69
COPB1-212ENST00000534771 CCL22O00626 93 aa-1.77□□□□□ -2.69
COPB1-212ENST00000534771 TNFSF15O95150 251 aa-1.77□□□□□ -2.69
COPB1-212ENST00000534771 CMPK1P30085 196 aa-1.77□□□□□ -2.69
COPB1-212ENST00000534771 HIST1H1AQ02539 215 aaPredicted RBP-1.77□□□□□ -2.69
COPB1-212ENST00000534771 TMEM128Q5BJH2 165 aa-1.77□□□□□ -2.69
COPB1-212ENST00000534771 MRPL34Q9BQ48 92 aaKnown RBP-1.77□□□□□ -2.69
COPB1-212ENST00000534771 PRO1933Q9H354 126 aa-1.77□□□□□ -2.69
COPB1-212ENST00000534771 FAIMQ9NVQ4 179 aa-1.77□□□□□ -2.69
COPB1-212ENST00000534771 GID8Q9NWU2 228 aa-1.77□□□□□ -2.69
COPB1-212ENST00000534771 CDKN2A-AS1Q9UH64 79 aa-1.77□□□□□ -2.69
COPB1-212ENST00000534771 ASXL1Q8IXJ9 1541 aa-1.77□□□□□ -2.69
COPB1-212ENST00000534771 FAM236AA0A1B0GUQ0 79 aa-1.78□□□□□ -2.69
COPB1-212ENST00000534771 FAM236BA0A1B0GV22 79 aa-1.78□□□□□ -2.69
COPB1-212ENST00000534771 LOC285095A0A1B0GVY8 99 aa-1.78□□□□□ -2.69
COPB1-212ENST00000534771 A0A1B0GX51 115 aa-1.78□□□□□ -2.69
COPB1-212ENST00000534771 NEFHP12036 1026 aa-1.78□□□□□ -2.69
COPB1-212ENST00000534771 RRAS2P62070 204 aaPredicted RBP-1.78□□□□□ -2.69
COPB1-212ENST00000534771 RPS28P62857 69 aaKnown RBP-1.78□□□□□ -2.69
COPB1-212ENST00000534771 MMGT1Q8N4V1 131 aa-1.78□□□□□ -2.69
COPB1-212ENST00000534771 PCBD2Q9H0N5 130 aa-1.78□□□□□ -2.69
COPB1-212ENST00000534771 NCOA3Q9Y6Q9 1424 aa-1.78□□□□□ -2.69
COPB1-212ENST00000534771 SPEF2Q9C093 1822 aa-1.79□□□□□ -2.7
COPB1-212ENST00000534771 PIGBOS1A0A0B4J2F0 54 aa-1.79□□□□□ -2.7
COPB1-212ENST00000534771 HIST1H1DP16402 221 aaKnown RBP-1.79□□□□□ -2.7
COPB1-212ENST00000534771 SEC11AP67812 179 aa-1.79□□□□□ -2.7
COPB1-212ENST00000534771 TFAMQ00059 246 aaKnown RBP-1.79□□□□□ -2.7
COPB1-212ENST00000534771 LCN9Q8WX39 176 aa-1.79□□□□□ -2.7
COPB1-212ENST00000534771 KIAA1551Q9HCM1 1747 aa-1.8□□□□□ -2.7
COPB1-212ENST00000534771 TET3O43151 1660 aa-1.8□□□□□ -2.7
COPB1-212ENST00000534771 ASPMQ8IZT6 3477 aa-1.8□□□□□ -2.7
COPB1-212ENST00000534771 IGLC1P0CG04 106 aa-1.8□□□□□ -2.7
COPB1-212ENST00000534771 WHAMMP3Q1A5X7 153 aa-1.8□□□□□ -2.7
COPB1-212ENST00000534771 CHMP6Q96FZ7 201 aa-1.8□□□□□ -2.7
COPB1-212ENST00000534771 PLEKHH2Q8IVE3 1493 aa-1.81□□□□□ -2.7
COPB1-212ENST00000534771 NLRP1Q9C000 1473 aa-1.81□□□□□ -2.7
COPB1-212ENST00000534771 EDC4Q6P2E9 1401 aaKnown RBP-1.81□□□□□ -2.7
COPB1-212ENST00000534771 LOC100130705A0A1B0GUX0 176 aa-1.81□□□□□ -2.7
COPB1-212ENST00000534771 TMEM238C9JI98 176 aa-1.81□□□□□ -2.7
COPB1-212ENST00000534771 S100GP29377 79 aa-1.81□□□□□ -2.7
COPB1-212ENST00000534771 MRPL54Q6P161 138 aaKnown RBP-1.81□□□□□ -2.7
COPB1-212ENST00000534771 NXT2Q9NPJ8 142 aaKnown RBP-1.81□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms