RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 SMIM20Q8N5G0 67 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 TMEM75Q8N9X5 138 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 OR2T35Q8NGX2 323 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 ATP6V0E2Q8NHE4 81 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 FAM167A-AS1Q96KT0 104 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 LINC01600Q96MT4 127 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 TXNDC17Q9BRA2 123 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 MAP1LC3AQ9H492 121 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 TRAPPC1Q9Y5R8 145 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 PXMP4Q9Y6I8 212 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 MAP1LC3B2A6NCE7 125 aa2.66□□□□□ -1.98
CASP4-213ENST00000534356 FAM24AA6NFZ4 105 aa2.66□□□□□ -1.98
CASP4-213ENST00000534356 M0R2P5 195 aa2.66□□□□□ -1.98
CASP4-213ENST00000534356 CST7O76096 145 aa2.66□□□□□ -1.98
CASP4-213ENST00000534356 SMIM17P0DL12 118 aa2.66□□□□□ -1.98
CASP4-213ENST00000534356 S100A7P31151 101 aa2.66□□□□□ -1.98
CASP4-213ENST00000534356 ZNF80P51504 273 aaPredicted RBP2.66□□□□□ -1.98
CASP4-213ENST00000534356 FABP9Q0Z7S8 132 aa2.66□□□□□ -1.98
CASP4-213ENST00000534356 ENHOQ6UWT2 76 aa2.66□□□□□ -1.98
CASP4-213ENST00000534356 AMN1Q8IY45 258 aa2.66□□□□□ -1.98
CASP4-213ENST00000534356 SMIM4Q8WVI0 70 aa2.66□□□□□ -1.98
CASP4-213ENST00000534356 UBE2WQ96B02 151 aa2.66□□□□□ -1.98
CASP4-213ENST00000534356 PSMG3Q9BT73 122 aaPredicted RBP2.66□□□□□ -1.98
CASP4-213ENST00000534356 MAP1LC3BQ9GZQ8 125 aa2.66□□□□□ -1.98
CASP4-213ENST00000534356 GTSF1LQ9H1H1 148 aa2.66□□□□□ -1.98
CASP4-213ENST00000534356 CST9LQ9H4G1 147 aa2.66□□□□□ -1.98
CASP4-213ENST00000534356 NPVFQ9HCQ7 196 aa2.66□□□□□ -1.98
CASP4-213ENST00000534356 LYRM2Q9NU23 88 aaPredicted RBP2.66□□□□□ -1.98
CASP4-213ENST00000534356 HSPB8Q9UJY1 196 aa2.66□□□□□ -1.98
CASP4-213ENST00000534356 TRAV8-1A0A0A6YYK1 113 aa2.65□□□□□ -1.99
CASP4-213ENST00000534356 HMGB3O15347 200 aaKnown RBP2.65□□□□□ -1.99
CASP4-213ENST00000534356 LINC00694P0DN24 101 aa2.65□□□□□ -1.99
CASP4-213ENST00000534356 SLC25A6P12236 298 aa2.65□□□□□ -1.99
CASP4-213ENST00000534356 TAS2R30P59541 319 aa2.65□□□□□ -1.99
CASP4-213ENST00000534356 IAH1Q2TAA2 248 aaPredicted RBP2.65□□□□□ -1.99
CASP4-213ENST00000534356 ACOT6Q3I5F7 207 aaPredicted RBP2.65□□□□□ -1.99
CASP4-213ENST00000534356 KRTAP26-1Q6PEX3 210 aa2.65□□□□□ -1.99
CASP4-213ENST00000534356 DIRAS2Q96HU8 199 aa2.65□□□□□ -1.99
CASP4-213ENST00000534356 CIB3Q96Q77 187 aaPredicted RBP2.65□□□□□ -1.99
CASP4-213ENST00000534356 ZNF471Q9BX82 626 aaPredicted RBP2.65□□□□□ -1.99
CASP4-213ENST00000534356 SNHG12Q9BXW3 62 aa2.65□□□□□ -1.99
CASP4-213ENST00000534356 SLC39A9Q9NUM3 307 aa2.65□□□□□ -1.99
CASP4-213ENST00000534356 TIMM9Q9Y5J7 89 aa2.65□□□□□ -1.99
CASP4-213ENST00000534356 SDHAF1A6NFY7 115 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 GGTLC3B5MD39 225 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 TMEM250H0YL14 139 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 APOC3P02656 99 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 MT-ND4LP03901 98 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 GNG5P63218 68 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 PEA15Q15121 130 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 TMEM78Q5T7P6 136 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 Q6AWC8 147 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 CLPSL2Q6UWE3 100 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 GTF2H5Q6ZYL4 71 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 C9orf163Q8N9P6 203 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 OR5A1Q8NGJ0 315 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 DPH3Q96FX2 82 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 SPANXDQ9BXN6 97 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 C11orf1Q9H5F2 150 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 SMCO4Q9NRQ5 59 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 SS18L2Q9UHA2 77 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 NAT8Q9UHE5 227 aa2.64□□□□□ -1.99
CASP4-213ENST00000534356 UBE2L5PA0A1B0GUS4 154 aa2.63□□□□□ -1.99
CASP4-213ENST00000534356 A0A1B0GV50 99 aa2.63□□□□□ -1.99
CASP4-213ENST00000534356 TRBV6-4A0A1B0GX49 114 aa2.63□□□□□ -1.99
CASP4-213ENST00000534356 DUXBA0A1W2PPF3 345 aa2.63□□□□□ -1.99
CASP4-213ENST00000534356 NMBP08949 121 aa2.63□□□□□ -1.99
CASP4-213ENST00000534356 ESDP10768 282 aa2.63□□□□□ -1.99
CASP4-213ENST00000534356 RPL12P30050 165 aaKnown RBP2.63□□□□□ -1.99
CASP4-213ENST00000534356 GNG4P50150 75 aa2.63□□□□□ -1.99
CASP4-213ENST00000534356 RPS28P62857 69 aaKnown RBP2.63□□□□□ -1.99
CASP4-213ENST00000534356 SSBP1Q04837 148 aaKnown RBP2.63□□□□□ -1.99
CASP4-213ENST00000534356 RHOHQ15669 191 aa2.63□□□□□ -1.99
CASP4-213ENST00000534356 LGALSLQ3ZCW2 172 aaPredicted RBP2.63□□□□□ -1.99
CASP4-213ENST00000534356 PYY3Q5JQD4 70 aa2.63□□□□□ -1.99
CASP4-213ENST00000534356 PRADC1Q9BSG0 188 aa2.63□□□□□ -1.99
CASP4-213ENST00000534356 MED28Q9H204 178 aa2.63□□□□□ -1.99
CASP4-213ENST00000534356 TMEM14CQ9P0S9 112 aa2.63□□□□□ -1.99
CASP4-213ENST00000534356 CACFD1Q9UGQ2 172 aa2.63□□□□□ -1.99
CASP4-213ENST00000534356 MUC17Q685J3 4493 aa2.63□□□□□ -1.99
CASP4-213ENST00000534356 A0A1W2PRE2 83 aa2.62□□□□□ -1.99
CASP4-213ENST00000534356 FNDC10F2Z333 226 aa2.62□□□□□ -1.99
CASP4-213ENST00000534356 J3KT08 172 aa2.62□□□□□ -1.99
CASP4-213ENST00000534356 K7ERS5 55 aa2.62□□□□□ -1.99
CASP4-213ENST00000534356 CCL25O15444 150 aa2.62□□□□□ -1.99
CASP4-213ENST00000534356 RNASE3P12724 160 aaKnown RBP2.62□□□□□ -1.99
CASP4-213ENST00000534356 INPP1P49441 399 aa2.62□□□□□ -1.99
CASP4-213ENST00000534356 CIRBPQ14011 172 aaKnown RBP2.62□□□□□ -1.99
CASP4-213ENST00000534356 JOSD1Q15040 202 aaPredicted RBP2.62□□□□□ -1.99
CASP4-213ENST00000534356 IQCJQ1A5X6 159 aa2.62□□□□□ -1.99
CASP4-213ENST00000534356 TDRG1Q3Y452 100 aa2.62□□□□□ -1.99
CASP4-213ENST00000534356 MBD3L1Q8WWY6 194 aa2.62□□□□□ -1.99
CASP4-213ENST00000534356 HIST1H2BAQ96A08 127 aa2.62□□□□□ -1.99
CASP4-213ENST00000534356 BORCS7Q96B45 105 aa2.62□□□□□ -1.99
CASP4-213ENST00000534356 DPH3P1Q9H4G8 78 aa2.62□□□□□ -1.99
CASP4-213ENST00000534356 NAT8BQ9UHF3 227 aa2.62□□□□□ -1.99
CASP4-213ENST00000534356 ERG28Q9UKR5 140 aa2.62□□□□□ -1.99
CASP4-213ENST00000534356 A0A0B4J2C4 111 aa2.61□□□□□ -1.99
CASP4-213ENST00000534356 A0A0D9SG52 128 aa2.61□□□□□ -1.99
CASP4-213ENST00000534356 A0A1B0GX51 115 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms