RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 LINC01546A6NGU7 62 aa4.97□□□□□ -1.61
CASP4-212ENST00000533730 XCL1P47992 114 aa4.97□□□□□ -1.61
CASP4-212ENST00000533730 RAB5BP61020 215 aa4.97□□□□□ -1.61
CASP4-212ENST00000533730 TMEM141Q96I45 108 aa4.97□□□□□ -1.61
CASP4-212ENST00000533730 OPRPNQ99935 248 aaPredicted RBP4.97□□□□□ -1.61
CASP4-212ENST00000533730 C2orf88Q9BSF0 95 aa4.97□□□□□ -1.61
CASP4-212ENST00000533730 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.96□□□□□ -1.62
CASP4-212ENST00000533730 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.96□□□□□ -1.62
CASP4-212ENST00000533730 TRAV13-1A0A0B4J241 112 aa4.96□□□□□ -1.62
CASP4-212ENST00000533730 RNASE13Q5GAN3 156 aaKnown RBP4.96□□□□□ -1.62
CASP4-212ENST00000533730 TEX43Q6ZNM6 134 aa4.96□□□□□ -1.62
CASP4-212ENST00000533730 Q8N377 158 aa4.96□□□□□ -1.62
CASP4-212ENST00000533730 C18orf32Q8TCD1 76 aa4.96□□□□□ -1.62
CASP4-212ENST00000533730 TOMM6Q96B49 74 aa4.96□□□□□ -1.62
CASP4-212ENST00000533730 TIMM17AQ99595 171 aa4.96□□□□□ -1.62
CASP4-212ENST00000533730 IGHV1-58A0A0C4DH39 117 aa4.95□□□□□ -1.62
CASP4-212ENST00000533730 IGIPA6NJ69 53 aa4.95□□□□□ -1.62
CASP4-212ENST00000533730 COX7A2LO14548 114 aa4.95□□□□□ -1.62
CASP4-212ENST00000533730 APOMO95445 188 aa4.95□□□□□ -1.62
CASP4-212ENST00000533730 LINC00614P0C842 121 aa4.95□□□□□ -1.62
CASP4-212ENST00000533730 CNBPP62633 177 aaKnown RBP4.95□□□□□ -1.62
CASP4-212ENST00000533730 SCGB3A1Q96QR1 104 aa4.95□□□□□ -1.62
CASP4-212ENST00000533730 GVQW2A0A096LPI5 108 aaPredicted RBP4.94□□□□□ -1.62
CASP4-212ENST00000533730 SEC11AP67812 179 aa4.94□□□□□ -1.62
CASP4-212ENST00000533730 C15orf56Q8N910 161 aa4.94□□□□□ -1.62
CASP4-212ENST00000533730 FAM104AQ969W3 186 aa4.94□□□□□ -1.62
CASP4-212ENST00000533730 AMELXQ99217 191 aa4.94□□□□□ -1.62
CASP4-212ENST00000533730 PKIGQ9Y2B9 76 aa4.94□□□□□ -1.62
CASP4-212ENST00000533730 FRAS1Q86XX4 4008 aa4.93□□□□□ -1.62
CASP4-212ENST00000533730 IGHV3OR16-9A0A0B4J2B5 98 aa4.93□□□□□ -1.62
CASP4-212ENST00000533730 KRTAP29-1A8MX34 341 aaPredicted RBP4.93□□□□□ -1.62
CASP4-212ENST00000533730 HSBP1O75506 76 aa4.93□□□□□ -1.62
CASP4-212ENST00000533730 HBDP02042 147 aa4.93□□□□□ -1.62
CASP4-212ENST00000533730 FUSP35637 526 aaKnown RBP eCLIP4.93□□□□□ -1.62
CASP4-212ENST00000533730 UBE2D1P51668 147 aa4.93□□□□□ -1.62
CASP4-212ENST00000533730 KRTAP10-1P60331 282 aa4.93□□□□□ -1.62
CASP4-212ENST00000533730 C9orf163Q8N9P6 203 aa4.93□□□□□ -1.62
CASP4-212ENST00000533730 CHCHD1Q96BP2 118 aaKnown RBP4.93□□□□□ -1.62
CASP4-212ENST00000533730 DNAH10Q8IVF4 4471 aa4.93□□□□□ -1.62
CASP4-212ENST00000533730 COLCA2A8K830 154 aa4.92□□□□□ -1.62
CASP4-212ENST00000533730 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.92□□□□□ -1.62
CASP4-212ENST00000533730 TRGC2P03986 189 aa4.92□□□□□ -1.62
CASP4-212ENST00000533730 CXCL6P80162 114 aa4.92□□□□□ -1.62
CASP4-212ENST00000533730 HIGD2BQ4VC39 106 aa4.92□□□□□ -1.62
CASP4-212ENST00000533730 LINC00173Q6ZV60 143 aa4.92□□□□□ -1.62
CASP4-212ENST00000533730 OR10D4PQ8NGN7 298 aa4.92□□□□□ -1.62
CASP4-212ENST00000533730 DNAH17Q9UFH2 4485 aa4.91□□□□□ -1.62
CASP4-212ENST00000533730 IGHV3-64A0A075B6Q5 118 aa4.91□□□□□ -1.62
CASP4-212ENST00000533730 S100A1P23297 94 aa4.91□□□□□ -1.62
CASP4-212ENST00000533730 HERVK_113P63121 156 aa4.91□□□□□ -1.62
CASP4-212ENST00000533730 PMVKQ15126 192 aa4.91□□□□□ -1.62
CASP4-212ENST00000533730 Q6ZSA8 131 aa4.91□□□□□ -1.62
CASP4-212ENST00000533730 FAM19A3Q7Z5A8 133 aa4.91□□□□□ -1.62
CASP4-212ENST00000533730 C5orf38Q86SI9 138 aa4.91□□□□□ -1.62
CASP4-212ENST00000533730 BAGE3Q86Y29 109 aa4.91□□□□□ -1.62
CASP4-212ENST00000533730 HECTD4Q9Y4D8 3996 aa4.9□□□□□ -1.62
CASP4-212ENST00000533730 DNAH2Q9P225 4427 aa4.9□□□□□ -1.62
CASP4-212ENST00000533730 ORAOV1Q8WV07 137 aa4.9□□□□□ -1.63
CASP4-212ENST00000533730 HIST1H4GQ99525 98 aa4.9□□□□□ -1.63
CASP4-212ENST00000533730 FAT2Q9NYQ8 4349 aa4.89□□□□□ -1.63
CASP4-212ENST00000533730 A0A087WYN8 130 aa4.89□□□□□ -1.63
CASP4-212ENST00000533730 A0A096LNJ9 63 aa4.89□□□□□ -1.63
CASP4-212ENST00000533730 TINCRA0A1B0GVN0 87 aa4.89□□□□□ -1.63
CASP4-212ENST00000533730 SPAG11BQ08648 103 aa4.89□□□□□ -1.63
CASP4-212ENST00000533730 SYCNQ0VAF6 134 aa4.89□□□□□ -1.63
CASP4-212ENST00000533730 PDZD11Q5EBL8 140 aa4.89□□□□□ -1.63
CASP4-212ENST00000533730 SDIM1Q6ZPB5 146 aa4.89□□□□□ -1.63
CASP4-212ENST00000533730 CARD19Q96LW7 228 aa4.89□□□□□ -1.63
CASP4-212ENST00000533730 CAMK2N2Q96S95 79 aa4.89□□□□□ -1.63
CASP4-212ENST00000533730 CST9LQ9H4G1 147 aa4.89□□□□□ -1.63
CASP4-212ENST00000533730 EPPK1P58107 5090 aaKnown RBP4.88□□□□□ -1.63
CASP4-212ENST00000533730 IGLV4-69A0A075B6H9 119 aa4.88□□□□□ -1.63
CASP4-212ENST00000533730 SCO1O75880 301 aa4.88□□□□□ -1.63
CASP4-212ENST00000533730 COX6A2Q02221 97 aa4.88□□□□□ -1.63
CASP4-212ENST00000533730 PMCHL1Q16048 86 aa4.88□□□□□ -1.63
CASP4-212ENST00000533730 PRR4Q16378 134 aa4.88□□□□□ -1.63
CASP4-212ENST00000533730 ZC2HC1BQ5TFG8 222 aa4.88□□□□□ -1.63
CASP4-212ENST00000533730 PACRGQ96M98 296 aaPredicted RBP4.88□□□□□ -1.63
CASP4-212ENST00000533730 CHAC1Q9BUX1 264 aa4.88□□□□□ -1.63
CASP4-212ENST00000533730 LINC00474Q9P2X8 69 aa4.88□□□□□ -1.63
CASP4-212ENST00000533730 A0A0J9YXV3 536 aa4.87□□□□□ -1.63
CASP4-212ENST00000533730 NDUFAF8A1L188 74 aa4.87□□□□□ -1.63
CASP4-212ENST00000533730 H3BRM9 83 aa4.87□□□□□ -1.63
CASP4-212ENST00000533730 NDUFA1O15239 70 aa4.87□□□□□ -1.63
CASP4-212ENST00000533730 SERF1AO75920 110 aa4.87□□□□□ -1.63
CASP4-212ENST00000533730 NDUFA6P56556 154 aa4.87□□□□□ -1.63
CASP4-212ENST00000533730 LINC00469Q8N7U9 141 aa4.87□□□□□ -1.63
CASP4-212ENST00000533730 IFI27L1Q96BM0 104 aa4.87□□□□□ -1.63
CASP4-212ENST00000533730 LINC00526Q96FQ7 95 aa4.87□□□□□ -1.63
CASP4-212ENST00000533730 CDKN2A-AS1Q9UH64 79 aa4.87□□□□□ -1.63
CASP4-212ENST00000533730 BIRC6Q9NR09 4857 aa4.87□□□□□ -1.63
CASP4-212ENST00000533730 PKD1P98161 4303 aa4.86□□□□□ -1.63
CASP4-212ENST00000533730 LOC107984640A0A0U1RRK4 108 aa4.86□□□□□ -1.63
CASP4-212ENST00000533730 OXTP01178 125 aa4.86□□□□□ -1.63
CASP4-212ENST00000533730 IGLC3P0DOY3 106 aa4.86□□□□□ -1.63
CASP4-212ENST00000533730 CIRBPQ14011 172 aaKnown RBP4.86□□□□□ -1.63
CASP4-212ENST00000533730 Q6ZRU5 148 aa4.86□□□□□ -1.63
CASP4-212ENST00000533730 Q8IZM0 81 aa4.86□□□□□ -1.63
CASP4-212ENST00000533730 MAP1LC3CQ9BXW4 147 aa4.86□□□□□ -1.63
CASP4-212ENST00000533730 MRPL35Q9NZE8 188 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms