RNA–Protein interactions for RNA: ENST00000533688.5

PDZD3-213, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-213ENST00000533688 RPS10P5Q9NQ39 176 aa9.68□□□□□ -0.86
PDZD3-213ENST00000533688 C22orf24Q9Y442 160 aa9.68□□□□□ -0.86
PDZD3-213ENST00000533688 A0A087X002 238 aa9.67□□□□□ -0.86
PDZD3-213ENST00000533688 MT-ND4LP03901 98 aa9.67□□□□□ -0.86
PDZD3-213ENST00000533688 LOC389332A0A1B0GUA5 103 aa9.66□□□□□ -0.86
PDZD3-213ENST00000533688 Q6ZN92 141 aa9.66□□□□□ -0.86
PDZD3-213ENST00000533688 TMEM136Q6ZRR5 245 aa9.66□□□□□ -0.86
PDZD3-213ENST00000533688 ANAPC16Q96DE5 110 aa9.66□□□□□ -0.86
PDZD3-213ENST00000533688 LBHQ53QV2 105 aaPredicted RBP9.65□□□□□ -0.86
PDZD3-213ENST00000533688 C6orf226Q5I0X4 101 aa9.65□□□□□ -0.86
PDZD3-213ENST00000533688 LINC01561Q8N1V8 128 aa9.65□□□□□ -0.86
PDZD3-213ENST00000533688 RPL28P46779 137 aaKnown RBP9.64□□□□□ -0.87
PDZD3-213ENST00000533688 LINC00173Q6ZV60 143 aa9.64□□□□□ -0.87
PDZD3-213ENST00000533688 Q8IZM0 81 aa9.64□□□□□ -0.87
PDZD3-213ENST00000533688 TYMSOSQ8TAI1 123 aa9.64□□□□□ -0.87
PDZD3-213ENST00000533688 BCE1O60756 84 aa9.63□□□□□ -0.87
PDZD3-213ENST00000533688 CRYGAP11844 174 aa9.63□□□□□ -0.87
PDZD3-213ENST00000533688 C2orf66Q6UXQ4 117 aa9.63□□□□□ -0.87
PDZD3-213ENST00000533688 MRPL55Q7Z7F7 128 aaKnown RBP9.63□□□□□ -0.87
PDZD3-213ENST00000533688 ALKBH7Q9BT30 221 aaPredicted RBP9.63□□□□□ -0.87
PDZD3-213ENST00000533688 SMCO4Q9NRQ5 59 aa9.63□□□□□ -0.87
PDZD3-213ENST00000533688 CYSLTR1Q9Y271 337 aa9.63□□□□□ -0.87
PDZD3-213ENST00000533688 CBLN2Q8IUK8 224 aa9.62□□□□□ -0.87
PDZD3-213ENST00000533688 VCX2Q9H322 139 aa9.62□□□□□ -0.87
PDZD3-213ENST00000533688 MAP1LC3AQ9H492 121 aa9.62□□□□□ -0.87
PDZD3-213ENST00000533688 LCE2AQ5TA79 106 aaPredicted RBP9.61□□□□□ -0.87
PDZD3-213ENST00000533688 ATP5L2Q7Z4Y8 100 aa9.61□□□□□ -0.87
PDZD3-213ENST00000533688 AMELXQ99217 191 aa9.61□□□□□ -0.87
PDZD3-213ENST00000533688 RETNLBQ9BQ08 111 aa9.61□□□□□ -0.87
PDZD3-213ENST00000533688 ANAPC11Q9NYG5 84 aa9.61□□□□□ -0.87
PDZD3-213ENST00000533688 RPL37AP8A6NKH3 93 aa9.6□□□□□ -0.87
PDZD3-213ENST00000533688 F8VRH5 84 aa9.6□□□□□ -0.87
PDZD3-213ENST00000533688 YPEL4Q96NS1 127 aa9.6□□□□□ -0.87
PDZD3-213ENST00000533688 TP73-AS1Q9UF72 201 aa9.6□□□□□ -0.87
PDZD3-213ENST00000533688 MUC17Q685J3 4493 aa9.6□□□□□ -0.87
PDZD3-213ENST00000533688 CDKN2A-AS1Q9UH64 79 aa9.59□□□□□ -0.87
PDZD3-213ENST00000533688 LAMTOR2Q9Y2Q5 125 aa9.59□□□□□ -0.87
PDZD3-213ENST00000533688 GAGE10A6NGK3 116 aa9.58□□□□□ -0.88
PDZD3-213ENST00000533688 Q8N8P6 123 aa9.58□□□□□ -0.88
PDZD3-213ENST00000533688 PRSS47A8MTI9 375 aa9.57□□□□□ -0.88
PDZD3-213ENST00000533688 HERVK_113P63121 156 aa9.57□□□□□ -0.88
PDZD3-213ENST00000533688 ORMDL2Q53FV1 153 aa9.57□□□□□ -0.88
PDZD3-213ENST00000533688 LINC00167Q96N53 147 aa9.57□□□□□ -0.88
PDZD3-213ENST00000533688 IGIPA6NJ69 53 aa9.56□□□□□ -0.88
PDZD3-213ENST00000533688 COLCA2A8K830 154 aa9.56□□□□□ -0.88
PDZD3-213ENST00000533688 KRTAP13-2Q52LG2 175 aa9.56□□□□□ -0.88
PDZD3-213ENST00000533688 FAM19A3Q7Z5A8 133 aa9.56□□□□□ -0.88
PDZD3-213ENST00000533688 GEMIN7Q9H840 131 aaKnown RBP9.56□□□□□ -0.88
PDZD3-213ENST00000533688 NPSP0C0P6 89 aa9.55□□□□□ -0.88
PDZD3-213ENST00000533688 S100PP25815 95 aa9.55□□□□□ -0.88
PDZD3-213ENST00000533688 UBE2AP49459 152 aa9.55□□□□□ -0.88
PDZD3-213ENST00000533688 CXCL5P42830 114 aa9.54□□□□□ -0.88
PDZD3-213ENST00000533688 SEC11AP67812 179 aa9.54□□□□□ -0.88
PDZD3-213ENST00000533688 TRAV9-1A0A075B6T8 112 aa9.53□□□□□ -0.88
PDZD3-213ENST00000533688 LINC00304Q8N9R0 145 aa9.53□□□□□ -0.88
PDZD3-213ENST00000533688 CDIP1Q9H305 208 aa9.53□□□□□ -0.88
PDZD3-213ENST00000533688 KRTAP9-6A0A140TA67 174 aa9.52□□□□□ -0.89
PDZD3-213ENST00000533688 SMIM1B2RUZ4 78 aa9.52□□□□□ -0.89
PDZD3-213ENST00000533688 PAPPA-AS1Q5QFB9 102 aa9.52□□□□□ -0.89
PDZD3-213ENST00000533688 KRTAP13-1Q8IUC0 172 aa9.51□□□□□ -0.89
PDZD3-213ENST00000533688 NKAPP1Q8N9T2 125 aa9.51□□□□□ -0.89
PDZD3-213ENST00000533688 COX7B2Q8TF08 81 aa9.51□□□□□ -0.89
PDZD3-213ENST00000533688 IGKV2-28A0A075B6P5 120 aa9.5□□□□□ -0.89
PDZD3-213ENST00000533688 K7EMI3 77 aa9.5□□□□□ -0.89
PDZD3-213ENST00000533688 IGKV2D-28P01615 120 aa9.5□□□□□ -0.89
PDZD3-213ENST00000533688 RAB5BP61020 215 aa9.5□□□□□ -0.89
PDZD3-213ENST00000533688 TIMM17AQ99595 171 aa9.5□□□□□ -0.89
PDZD3-213ENST00000533688 NXT2Q9NPJ8 142 aaKnown RBP9.5□□□□□ -0.89
PDZD3-213ENST00000533688 TPRXLQ17RH7 258 aa9.49□□□□□ -0.89
PDZD3-213ENST00000533688 FAM229BQ4G0N7 80 aa9.49□□□□□ -0.89
PDZD3-213ENST00000533688 IGLV7-46A0A075B6I9 117 aa9.48□□□□□ -0.89
PDZD3-213ENST00000533688 IGLV5-37A0A075B6J1 123 aa9.48□□□□□ -0.89
PDZD3-213ENST00000533688 IGKV2D-26A0A0A0MRZ7 120 aa9.48□□□□□ -0.89
PDZD3-213ENST00000533688 PRLHP81277 87 aa9.48□□□□□ -0.89
PDZD3-213ENST00000533688 PDZD11Q5EBL8 140 aa9.48□□□□□ -0.89
PDZD3-213ENST00000533688 TOMM6Q96B49 74 aa9.48□□□□□ -0.89
PDZD3-213ENST00000533688 SPINK8P0C7L1 97 aa9.46□□□□□ -0.9
PDZD3-213ENST00000533688 TINCRA0A1B0GVN0 87 aa9.45□□□□□ -0.9
PDZD3-213ENST00000533688 G0S2P27469 103 aa9.45□□□□□ -0.9
PDZD3-213ENST00000533688 COX19Q49B96 90 aa9.45□□□□□ -0.9
PDZD3-213ENST00000533688 SCGB3A1Q96QR1 104 aa9.45□□□□□ -0.9
PDZD3-213ENST00000533688 ERASQ7Z444 233 aa9.44□□□□□ -0.9
PDZD3-213ENST00000533688 FAM19A1Q7Z5A9 133 aa9.44□□□□□ -0.9
PDZD3-213ENST00000533688 IGLV5-45A0A087WSX0 123 aa9.43□□□□□ -0.9
PDZD3-213ENST00000533688 TMEM238C9JI98 176 aa9.43□□□□□ -0.9
PDZD3-213ENST00000533688 GNB1LQ9BYB4 327 aa9.43□□□□□ -0.9
PDZD3-213ENST00000533688 ATP5LO75964 103 aa9.42□□□□□ -0.9
PDZD3-213ENST00000533688 PFN2P35080 140 aa9.42□□□□□ -0.9
PDZD3-213ENST00000533688 KIAA1644Q3SXP7 199 aa9.42□□□□□ -0.9
PDZD3-213ENST00000533688 TMEM126AQ9H061 195 aa9.42□□□□□ -0.9
PDZD3-213ENST00000533688 TRGC2P03986 189 aa9.41□□□□□ -0.9
PDZD3-213ENST00000533688 C3orf22Q8N5N4 141 aa9.41□□□□□ -0.9
PDZD3-213ENST00000533688 PPDPFQ9H3Y8 114 aa9.41□□□□□ -0.9
PDZD3-213ENST00000533688 TRAPPC1Q9Y5R8 145 aa9.41□□□□□ -0.9
PDZD3-213ENST00000533688 MRPL18Q9H0U6 180 aaKnown RBP9.4□□□□□ -0.9
PDZD3-213ENST00000533688 CST9LQ9H4G1 147 aa9.4□□□□□ -0.9
PDZD3-213ENST00000533688 FABP9Q0Z7S8 132 aa9.39□□□□□ -0.91
PDZD3-213ENST00000533688 VPREB1P12018 145 aa9.38□□□□□ -0.91
PDZD3-213ENST00000533688 H3BRM9 83 aa9.37□□□□□ -0.91
PDZD3-213ENST00000533688 M0R378 163 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms