RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 PKD1L3Q7Z443 1732 aa-0.47□□□□□ -2.49
ATM-220ENST00000533526 NCOA3Q9Y6Q9 1424 aa-0.47□□□□□ -2.49
ATM-220ENST00000533526 MRC2Q9UBG0 1479 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 DNAH17Q9UFH2 4485 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 ITPR3Q14573 2671 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 SPG11Q96JI7 2443 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 FASNP49327 2511 aaKnown RBP-0.48□□□□□ -2.49
ATM-220ENST00000533526 A0A087WVE0 104 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 A0A1B0GV90 55 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 FAM223BA6NKX1 122 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 F8VRH5 84 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 M0R2Z0 102 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 IGLC1P0CG04 106 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 MEIG1Q5JSS6 88 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 MRPL54Q6P161 138 aaKnown RBP-0.48□□□□□ -2.49
ATM-220ENST00000533526 BAGE2Q86Y30 109 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 MAFIPQ8WZ33 124 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 ARL11Q969Q4 196 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 LINC01600Q96MT4 127 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 PDCD10Q9BUL8 212 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 SPANXDQ9BXN6 97 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 TEP1Q99973 2627 aaKnown RBP-0.48□□□□□ -2.49
ATM-220ENST00000533526 ABCC5O15440 1437 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 PZPP20742 1482 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 MYOM2P54296 1465 aa-0.48□□□□□ -2.49
ATM-220ENST00000533526 MYO18BQ8IUG5 2567 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 NRKQ7Z2Y5 1582 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 GCN1Q92616 2671 aaKnown RBP-0.49□□□□□ -2.49
ATM-220ENST00000533526 NBEAL2Q6ZNJ1 2754 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 AKAP12Q02952 1782 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 COL12A1Q99715 3063 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 A0A0D9SFI3 127 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 PIN1P1O15428 100 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 SNCGO76070 127 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 DBIP07108 87 aaKnown RBP-0.49□□□□□ -2.49
ATM-220ENST00000533526 COX6B1P14854 86 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 CATR1Q13166 79 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 TMEM170BQ5T4T1 132 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 TCEAL4Q96EI5 215 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 SNRNP25Q9BV90 132 aaKnown RBP-0.49□□□□□ -2.49
ATM-220ENST00000533526 TMEM191AQ9H0A3 160 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 FXYD6Q9H0Q3 95 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 DPH3P1Q9H4G8 78 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 RERGLQ9H628 205 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 COPZ2Q9P299 210 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 APLNQ9ULZ1 77 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 SPCS1Q9Y6A9 102 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 RANBP2P49792 3224 aaKnown RBP-0.49□□□□□ -2.49
ATM-220ENST00000533526 HIVEP1P15822 2718 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 SCAPERQ9BY12 1400 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 PREX1Q8TCU6 1659 aa-0.49□□□□□ -2.49
ATM-220ENST00000533526 DSPP15924 2871 aaKnown RBP-0.5□□□□□ -2.49
ATM-220ENST00000533526 LINC00587B1AMM8 73 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 CHKB-CPT1BH3BT56 60 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 SFT2D2O95562 160 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 ARPC4P59998 168 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 UBE2D3P61077 147 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 UBE2D2P62837 147 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 Q0VG73 95 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 DEFB112Q30KQ8 113 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 COMMD6Q7Z4G1 85 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 C5orf38Q86SI9 138 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 MMGT1Q8N4V1 131 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 KCNRGQ8N5I3 272 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.5□□□□□ -2.49
ATM-220ENST00000533526 PSMG3Q9BT73 122 aaPredicted RBP-0.5□□□□□ -2.49
ATM-220ENST00000533526 DYNLRB1Q9NP97 96 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 SAR1AQ9NR31 198 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 ROCK2O75116 1388 aaKnown RBP-0.5□□□□□ -2.49
ATM-220ENST00000533526 TROQ12816 1431 aaPredicted RBP-0.5□□□□□ -2.49
ATM-220ENST00000533526 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.5□□□□□ -2.49
ATM-220ENST00000533526 ARHGAP5Q13017 1502 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 ZFYVE16Q7Z3T8 1539 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 TRIOO75962 3097 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 CICQ96RK0 1608 aaPredicted RBP-0.5□□□□□ -2.49
ATM-220ENST00000533526 ALKQ9UM73 1620 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.5□□□□□ -2.49
ATM-220ENST00000533526 PDE4DIPQ5VU43 2346 aa-0.5□□□□□ -2.49
ATM-220ENST00000533526 UQCR11O14957 56 aa-0.51□□□□□ -2.49
ATM-220ENST00000533526 YPEL1O60688 119 aa-0.51□□□□□ -2.49
ATM-220ENST00000533526 IFNA17P01571 189 aa-0.51□□□□□ -2.49
ATM-220ENST00000533526 IFNGP01579 166 aa-0.51□□□□□ -2.49
ATM-220ENST00000533526 PIPP12273 146 aaPredicted RBP-0.51□□□□□ -2.49
ATM-220ENST00000533526 GUCA1AP43080 201 aaPredicted RBP-0.51□□□□□ -2.49
ATM-220ENST00000533526 SMCO1Q147U7 214 aa-0.51□□□□□ -2.49
ATM-220ENST00000533526 RPL7L1Q6DKI1 246 aaKnown RBP-0.51□□□□□ -2.49
ATM-220ENST00000533526 DNAH10Q8IVF4 4471 aa-0.51□□□□□ -2.49
ATM-220ENST00000533526 TIAM2Q8IVF5 1701 aa-0.51□□□□□ -2.49
ATM-220ENST00000533526 PYDC1Q8WXC3 89 aa-0.51□□□□□ -2.49
ATM-220ENST00000533526 MGST2Q99735 147 aa-0.51□□□□□ -2.49
ATM-220ENST00000533526 FAM107BQ9H098 131 aa-0.51□□□□□ -2.49
ATM-220ENST00000533526 NAA60Q9H7X0 242 aa-0.51□□□□□ -2.49
ATM-220ENST00000533526 R4GMQ9 66 aa-0.51□□□□□ -2.49
ATM-220ENST00000533526 ARL2-SNX15V9GYD0 113 aa-0.51□□□□□ -2.49
ATM-220ENST00000533526 DNAH5Q8TE73 4624 aa-0.52□□□□□ -2.49
ATM-220ENST00000533526 LTN1O94822 1766 aa-0.52□□□□□ -2.49
ATM-220ENST00000533526 LRRC37AA6NMS7 1700 aa-0.52□□□□□ -2.49
ATM-220ENST00000533526 USP32Q8NFA0 1604 aa-0.52□□□□□ -2.49
ATM-220ENST00000533526 POLA1P09884 1462 aaPredicted RBP-0.52□□□□□ -2.49
ATM-220ENST00000533526 hADV29S1A0JD25 119 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms