RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 TRBV6-8A0A0A6YYG3 113 aa12.56□□□□□ -0.4
UBXN1-213ENST00000532904 TRGV4A0A0C4DH28 118 aa12.56□□□□□ -0.4
UBXN1-213ENST00000532904 LINC00158P58513 81 aa12.56□□□□□ -0.4
UBXN1-213ENST00000532904 SMIM11BQ8TCY0 68 aa12.56□□□□□ -0.4
UBXN1-213ENST00000532904 CCL18P55774 89 aa12.55□□□□□ -0.4
UBXN1-213ENST00000532904 IGKV3OR2-268A0A0C4DH90 116 aa12.55□□□□□ -0.4
UBXN1-213ENST00000532904 IBA57-AS1B1ANH7 110 aa12.55□□□□□ -0.4
UBXN1-213ENST00000532904 A0A087WZ39 114 aa12.54□□□□□ -0.4
UBXN1-213ENST00000532904 H0YGX0 51 aa12.53□□□□□ -0.4
UBXN1-213ENST00000532904 FHL2Q14192 279 aa12.53□□□□□ -0.4
UBXN1-213ENST00000532904 A0A087WYN8 130 aa12.53□□□□□ -0.4
UBXN1-213ENST00000532904 CXCL5P42830 114 aa12.53□□□□□ -0.4
UBXN1-213ENST00000532904 NIPBLQ6KC79 2804 aaeCLIP12.53□□□□□ -0.4
UBXN1-213ENST00000532904 GAGE2AQ6NT46 116 aa12.52□□□□□ -0.4
UBXN1-213ENST00000532904 DNAL4O96015 105 aa12.52□□□□□ -0.41
UBXN1-213ENST00000532904 C5orf38Q86SI9 138 aa12.52□□□□□ -0.41
UBXN1-213ENST00000532904 BAHCC1Q9P281 2608 aa12.51□□□□□ -0.41
UBXN1-213ENST00000532904 WFDC9Q8NEX5 89 aa12.5□□□□□ -0.41
UBXN1-213ENST00000532904 ATP5G1P05496 136 aa12.5□□□□□ -0.41
UBXN1-213ENST00000532904 SPATA3Q8NHX4 192 aa12.5□□□□□ -0.41
UBXN1-213ENST00000532904 NOTCH3Q9UM47 2321 aa12.5□□□□□ -0.41
UBXN1-213ENST00000532904 OBSCN-AS1Q96MR7 158 aa12.49□□□□□ -0.41
UBXN1-213ENST00000532904 LINC00959A0A1B0GUT2 108 aa12.48□□□□□ -0.41
UBXN1-213ENST00000532904 WIPF1O43516 503 aa12.48□□□□□ -0.41
UBXN1-213ENST00000532904 PFN2P35080 140 aa12.48□□□□□ -0.41
UBXN1-213ENST00000532904 TMEM126AQ9H061 195 aa12.48□□□□□ -0.41
UBXN1-213ENST00000532904 SMIM9A6NGZ8 99 aa12.47□□□□□ -0.41
UBXN1-213ENST00000532904 F8P00451 2351 aa12.47□□□□□ -0.41
UBXN1-213ENST00000532904 KIR2DL5BQ8NHK3 375 aa12.47□□□□□ -0.41
UBXN1-213ENST00000532904 PAX4O43316 350 aa12.46□□□□□ -0.41
UBXN1-213ENST00000532904 C9orf129Q5T035 196 aaKnown RBP12.46□□□□□ -0.41
UBXN1-213ENST00000532904 C3orf22Q8N5N4 141 aa12.45□□□□□ -0.42
UBXN1-213ENST00000532904 LECT2O14960 151 aa12.44□□□□□ -0.42
UBXN1-213ENST00000532904 LINC00612Q8N6U2 182 aa12.44□□□□□ -0.42
UBXN1-213ENST00000532904 C14orf132Q9NPU4 83 aa12.44□□□□□ -0.42
UBXN1-213ENST00000532904 TEP1Q99973 2627 aaKnown RBP12.44□□□□□ -0.42
UBXN1-213ENST00000532904 C6orf226Q5I0X4 101 aa12.44□□□□□ -0.42
UBXN1-213ENST00000532904 SMIM20Q8N5G0 67 aa12.44□□□□□ -0.42
UBXN1-213ENST00000532904 KLK5Q9Y337 293 aaPredicted RBP12.44□□□□□ -0.42
UBXN1-213ENST00000532904 OR13C6PQ8NH95 151 aa12.43□□□□□ -0.42
UBXN1-213ENST00000532904 UQCRQO14949 82 aa12.42□□□□□ -0.42
UBXN1-213ENST00000532904 X6R8D5 127 aa12.42□□□□□ -0.42
UBXN1-213ENST00000532904 TENM1Q9UKZ4 2725 aa12.42□□□□□ -0.42
UBXN1-213ENST00000532904 APOC4P55056 127 aa12.42□□□□□ -0.42
UBXN1-213ENST00000532904 HIST1H4AP62805 103 aaKnown RBP12.42□□□□□ -0.42
UBXN1-213ENST00000532904 ATRQ13535 2644 aa12.42□□□□□ -0.42
UBXN1-213ENST00000532904 Q8IZM0 81 aa12.41□□□□□ -0.42
UBXN1-213ENST00000532904 C3orf56Q8N813 242 aa12.41□□□□□ -0.42
UBXN1-213ENST00000532904 A0A1B0GUV1 79 aa12.41□□□□□ -0.42
UBXN1-213ENST00000532904 SS18Q15532 418 aa12.41□□□□□ -0.42
UBXN1-213ENST00000532904 C9orf153Q5TBE3 101 aa12.41□□□□□ -0.42
UBXN1-213ENST00000532904 LINC00526Q96FQ7 95 aa12.41□□□□□ -0.42
UBXN1-213ENST00000532904 VWFP04275 2813 aa12.4□□□□□ -0.42
UBXN1-213ENST00000532904 LINC01561Q8N1V8 128 aa12.4□□□□□ -0.42
UBXN1-213ENST00000532904 C11orf68Q9H3H3 251 aaKnown RBP12.4□□□□□ -0.42
UBXN1-213ENST00000532904 DEFB130BP0DP73 79 aa12.39□□□□□ -0.43
UBXN1-213ENST00000532904 DEFB130AP0DP74 79 aa12.39□□□□□ -0.43
UBXN1-213ENST00000532904 XCL1P47992 114 aa12.39□□□□□ -0.43
UBXN1-213ENST00000532904 GYPEP15421 78 aa12.39□□□□□ -0.43
UBXN1-213ENST00000532904 Q6JHZ5 121 aa12.39□□□□□ -0.43
UBXN1-213ENST00000532904 FLNBO75369 2602 aaKnown RBP12.38□□□□□ -0.43
UBXN1-213ENST00000532904 LINC00846Q9NV44 126 aa12.38□□□□□ -0.43
UBXN1-213ENST00000532904 NCR3O14931 201 aa12.38□□□□□ -0.43
UBXN1-213ENST00000532904 SLPIP03973 132 aa12.38□□□□□ -0.43
UBXN1-213ENST00000532904 LINC00167Q96N53 147 aa12.38□□□□□ -0.43
UBXN1-213ENST00000532904 ORMDL1Q9P0S3 153 aa12.38□□□□□ -0.43
UBXN1-213ENST00000532904 COX7CP15954 63 aa12.37□□□□□ -0.43
UBXN1-213ENST00000532904 LYRM9A8MSI8 78 aa12.36□□□□□ -0.43
UBXN1-213ENST00000532904 ATOX1O00244 68 aa12.36□□□□□ -0.43
UBXN1-213ENST00000532904 C2orf48Q96LS8 159 aa12.36□□□□□ -0.43
UBXN1-213ENST00000532904 A0A1B0GX51 115 aa12.35□□□□□ -0.43
UBXN1-213ENST00000532904 KRTAP24-1Q3LI83 254 aa12.35□□□□□ -0.43
UBXN1-213ENST00000532904 NANOS2P60321 138 aaKnown RBP12.34□□□□□ -0.43
UBXN1-213ENST00000532904 IGKV3D-7A0A0C4DH55 119 aa12.33□□□□□ -0.44
UBXN1-213ENST00000532904 NDUFC2O95298 119 aa12.33□□□□□ -0.44
UBXN1-213ENST00000532904 DEFB135Q30KP9 77 aa12.33□□□□□ -0.44
UBXN1-213ENST00000532904 CLPSL2Q6UWE3 100 aa12.33□□□□□ -0.44
UBXN1-213ENST00000532904 RPL18AQ02543 176 aaKnown RBP12.32□□□□□ -0.44
UBXN1-213ENST00000532904 PRO0255Q9UI72 69 aa12.32□□□□□ -0.44
UBXN1-213ENST00000532904 CCKP06307 115 aa12.31□□□□□ -0.44
UBXN1-213ENST00000532904 KIAA0087Q14695 138 aa12.31□□□□□ -0.44
UBXN1-213ENST00000532904 MIFP14174 115 aa12.31□□□□□ -0.44
UBXN1-213ENST00000532904 COX17Q14061 63 aa12.31□□□□□ -0.44
UBXN1-213ENST00000532904 CRYGAP11844 174 aa12.3□□□□□ -0.44
UBXN1-213ENST00000532904 Q8N814 137 aa12.3□□□□□ -0.44
UBXN1-213ENST00000532904 IGHV4-30-4P0DP06 118 aa12.3□□□□□ -0.44
UBXN1-213ENST00000532904 PRR3P79522 188 aaKnown RBP12.3□□□□□ -0.44
UBXN1-213ENST00000532904 CD164L2Q6UWJ8 174 aa12.3□□□□□ -0.44
UBXN1-213ENST00000532904 JMJD7-PLA2G4BH0Y9G9 81 aa12.29□□□□□ -0.44
UBXN1-213ENST00000532904 IGHV4-28A0A0C4DH34 117 aa12.28□□□□□ -0.44
UBXN1-213ENST00000532904 A0A096LPF7 62 aa12.28□□□□□ -0.44
UBXN1-213ENST00000532904 CFAP161Q6P656 301 aa12.28□□□□□ -0.44
UBXN1-213ENST00000532904 Q8NAQ8 132 aa12.28□□□□□ -0.44
UBXN1-213ENST00000532904 TMEM256-PLSCR3K7ERE1 68 aa12.26□□□□□ -0.45
UBXN1-213ENST00000532904 LINC00269Q8N2A0 174 aa12.26□□□□□ -0.45
UBXN1-213ENST00000532904 CHCHD10Q8WYQ3 142 aaPredicted RBP12.26□□□□□ -0.45
UBXN1-213ENST00000532904 EGFEM1PQ0D2K5 195 aa12.25□□□□□ -0.45
UBXN1-213ENST00000532904 A0A087WVE0 104 aa12.25□□□□□ -0.45
UBXN1-213ENST00000532904 S100A7L2Q5SY68 101 aa12.24□□□□□ -0.45
UBXN1-213ENST00000532904 DAD1P61803 113 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms