RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 CMC4P56277 68 aaPredicted RBP10.33□□□□□ -0.76
SSH3-210ENST00000532881 FAM222AQ5U5X8 452 aa10.33□□□□□ -0.76
SSH3-210ENST00000532881 SMIM11BQ8TCY0 68 aa10.33□□□□□ -0.76
SSH3-210ENST00000532881 KMT2BQ9UMN6 2715 aaPredicted RBP10.33□□□□□ -0.76
SSH3-210ENST00000532881 CRPP02741 224 aa10.32□□□□□ -0.76
SSH3-210ENST00000532881 C6orf226Q5I0X4 101 aa10.32□□□□□ -0.76
SSH3-210ENST00000532881 A0A087WZ39 114 aa10.31□□□□□ -0.76
SSH3-210ENST00000532881 FAM110AQ9BQ89 295 aa10.31□□□□□ -0.76
SSH3-210ENST00000532881 PAX4O43316 350 aa10.31□□□□□ -0.76
SSH3-210ENST00000532881 OR13C6PQ8NH95 151 aa10.31□□□□□ -0.76
SSH3-210ENST00000532881 SMCR5Q8TEV8 140 aa10.31□□□□□ -0.76
SSH3-210ENST00000532881 PKD1L1Q8TDX9 2849 aa10.31□□□□□ -0.76
SSH3-210ENST00000532881 HIVEP1P15822 2718 aa10.31□□□□□ -0.76
SSH3-210ENST00000532881 SLPIP03973 132 aa10.3□□□□□ -0.76
SSH3-210ENST00000532881 NSD1Q96L73 2696 aaPredicted RBP10.3□□□□□ -0.76
SSH3-210ENST00000532881 LY6G6DO95868 133 aa10.3□□□□□ -0.76
SSH3-210ENST00000532881 NDUFV3P56181 108 aaKnown RBP10.3□□□□□ -0.76
SSH3-210ENST00000532881 C9orf116Q5BN46 136 aaPredicted RBP10.29□□□□□ -0.76
SSH3-210ENST00000532881 LINC00269Q8N2A0 174 aa10.29□□□□□ -0.76
SSH3-210ENST00000532881 LINC00526Q96FQ7 95 aa10.28□□□□□ -0.76
SSH3-210ENST00000532881 INAFM1C9JVW0 142 aa10.28□□□□□ -0.76
SSH3-210ENST00000532881 DEFB121Q5J5C9 76 aa10.28□□□□□ -0.76
SSH3-210ENST00000532881 CCDC179H3BU77 68 aa10.27□□□□□ -0.76
SSH3-210ENST00000532881 J3QKU1 62 aa10.27□□□□□ -0.76
SSH3-210ENST00000532881 HTN3P15516 51 aa10.27□□□□□ -0.76
SSH3-210ENST00000532881 COPS9Q8WXC6 57 aa10.27□□□□□ -0.76
SSH3-210ENST00000532881 TRAV13-2A0A0B4J235 113 aa10.27□□□□□ -0.77
SSH3-210ENST00000532881 RPL28P46779 137 aaKnown RBP10.27□□□□□ -0.77
SSH3-210ENST00000532881 KIR2DL5BQ8NHK3 375 aa10.27□□□□□ -0.77
SSH3-210ENST00000532881 TEP1Q99973 2627 aaKnown RBP10.27□□□□□ -0.77
SSH3-210ENST00000532881 CELA1Q9UNI1 258 aa10.27□□□□□ -0.77
SSH3-210ENST00000532881 B5MCH6 92 aa10.26□□□□□ -0.77
SSH3-210ENST00000532881 TRACP01848 142 aa10.25□□□□□ -0.77
SSH3-210ENST00000532881 PRO0255Q9UI72 69 aa10.25□□□□□ -0.77
SSH3-210ENST00000532881 LECT2O14960 151 aa10.25□□□□□ -0.77
SSH3-210ENST00000532881 IBA57-AS1B1ANH7 110 aa10.24□□□□□ -0.77
SSH3-210ENST00000532881 GAGE2AQ6NT46 116 aa10.24□□□□□ -0.77
SSH3-210ENST00000532881 LINC00612Q8N6U2 182 aa10.24□□□□□ -0.77
SSH3-210ENST00000532881 SS18L2Q9UHA2 77 aa10.24□□□□□ -0.77
SSH3-210ENST00000532881 ANGP03950 147 aaKnown RBP10.24□□□□□ -0.77
SSH3-210ENST00000532881 SS18Q15532 418 aa10.24□□□□□ -0.77
SSH3-210ENST00000532881 C3orf56Q8N813 242 aa10.24□□□□□ -0.77
SSH3-210ENST00000532881 MALP21145 153 aa10.23□□□□□ -0.77
SSH3-210ENST00000532881 IGHV4-28A0A0C4DH34 117 aa10.23□□□□□ -0.77
SSH3-210ENST00000532881 C14orf132Q9NPU4 83 aa10.23□□□□□ -0.77
SSH3-210ENST00000532881 Q8NDZ9 215 aa10.22□□□□□ -0.77
SSH3-210ENST00000532881 C6orf223Q8N319 242 aa10.22□□□□□ -0.77
SSH3-210ENST00000532881 ANK2Q01484 3957 aa10.22□□□□□ -0.77
SSH3-210ENST00000532881 NCR3O14931 201 aa10.21□□□□□ -0.78
SSH3-210ENST00000532881 CHCHD10Q8WYQ3 142 aaPredicted RBP10.21□□□□□ -0.78
SSH3-210ENST00000532881 FAM240AA0A1B0GVK7 77 aa10.21□□□□□ -0.78
SSH3-210ENST00000532881 DNAL4O96015 105 aa10.21□□□□□ -0.78
SSH3-210ENST00000532881 A0A1B0GUV1 79 aa10.2□□□□□ -0.78
SSH3-210ENST00000532881 REG3AQ06141 175 aa10.19□□□□□ -0.78
SSH3-210ENST00000532881 KIAA0087Q14695 138 aa10.19□□□□□ -0.78
SSH3-210ENST00000532881 DAD1P61803 113 aa10.19□□□□□ -0.78
SSH3-210ENST00000532881 C10orf25Q5T742 122 aa10.19□□□□□ -0.78
SSH3-210ENST00000532881 NANOS2P60321 138 aaKnown RBP10.18□□□□□ -0.78
SSH3-210ENST00000532881 Q8IZM0 81 aa10.18□□□□□ -0.78
SSH3-210ENST00000532881 FAM236AA0A1B0GUQ0 79 aa10.17□□□□□ -0.78
SSH3-210ENST00000532881 FAM236BA0A1B0GV22 79 aa10.17□□□□□ -0.78
SSH3-210ENST00000532881 Q6Q795 121 aa10.17□□□□□ -0.78
SSH3-210ENST00000532881 C9orf66Q5T8R8 295 aa10.15□□□□□ -0.78
SSH3-210ENST00000532881 UNQ6190/PRO20217Q6UXQ8 127 aa10.15□□□□□ -0.78
SSH3-210ENST00000532881 CD164L2Q6UWJ8 174 aa10.15□□□□□ -0.79
SSH3-210ENST00000532881 Q8NAQ8 132 aa10.15□□□□□ -0.79
SSH3-210ENST00000532881 SMIM9A6NGZ8 99 aa10.14□□□□□ -0.79
SSH3-210ENST00000532881 KLK12Q9UKR0 248 aa10.14□□□□□ -0.79
SSH3-210ENST00000532881 TRBV7-7A0A0K0K1E9 115 aa10.13□□□□□ -0.79
SSH3-210ENST00000532881 LYRM9A8MSI8 78 aa10.13□□□□□ -0.79
SSH3-210ENST00000532881 SDIM1Q6ZPB5 146 aa10.13□□□□□ -0.79
SSH3-210ENST00000532881 PPDPFQ9H3Y8 114 aa10.13□□□□□ -0.79
SSH3-210ENST00000532881 TENM3Q9P273 2699 aa10.12□□□□□ -0.79
SSH3-210ENST00000532881 RETNQ9HD89 108 aa10.12□□□□□ -0.79
SSH3-210ENST00000532881 IGKV3D-7A0A0C4DH55 119 aa10.12□□□□□ -0.79
SSH3-210ENST00000532881 H0YGX0 51 aa10.12□□□□□ -0.79
SSH3-210ENST00000532881 MRPL23Q16540 153 aaKnown RBP10.12□□□□□ -0.79
SSH3-210ENST00000532881 ACYP1P07311 99 aa10.11□□□□□ -0.79
SSH3-210ENST00000532881 IGHV4-30-4P0DP06 118 aa10.11□□□□□ -0.79
SSH3-210ENST00000532881 LINC00846Q9NV44 126 aa10.11□□□□□ -0.79
SSH3-210ENST00000532881 INAFM2P0DMQ5 153 aa10.1□□□□□ -0.79
SSH3-210ENST00000532881 LINC00643Q86TS7 51 aa10.1□□□□□ -0.79
SSH3-210ENST00000532881 FLNBO75369 2602 aaKnown RBP10.1□□□□□ -0.79
SSH3-210ENST00000532881 CXCL5P42830 114 aa10.09□□□□□ -0.79
SSH3-210ENST00000532881 C6orf99Q4VX62 202 aa10.09□□□□□ -0.79
SSH3-210ENST00000532881 APOC4P55056 127 aa10.09□□□□□ -0.79
SSH3-210ENST00000532881 OXLD1Q5BKU9 147 aa10.08□□□□□ -0.8
SSH3-210ENST00000532881 FBN1P35555 2871 aaKnown RBP10.08□□□□□ -0.8
SSH3-210ENST00000532881 A0A087WVE0 104 aa10.08□□□□□ -0.8
SSH3-210ENST00000532881 CYSRT1A8MQ03 144 aa10.08□□□□□ -0.8
SSH3-210ENST00000532881 SPAG11BQ08648 103 aa10.08□□□□□ -0.8
SSH3-210ENST00000532881 XAGE1AQ9HD64 81 aa10.08□□□□□ -0.8
SSH3-210ENST00000532881 ENHOQ6UWT2 76 aa10.07□□□□□ -0.8
SSH3-210ENST00000532881 KLK5Q9Y337 293 aaPredicted RBP10.07□□□□□ -0.8
SSH3-210ENST00000532881 STAB1Q9NY15 2570 aa10.07□□□□□ -0.8
SSH3-210ENST00000532881 Q8N814 137 aa10.07□□□□□ -0.8
SSH3-210ENST00000532881 ORMDL1Q9P0S3 153 aa10.07□□□□□ -0.8
SSH3-210ENST00000532881 SPART-AS1P0CW21 52 aa10.06□□□□□ -0.8
SSH3-210ENST00000532881 RPL18AQ02543 176 aaKnown RBP10.06□□□□□ -0.8
SSH3-210ENST00000532881 S100A7L2Q5SY68 101 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms