RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 LOC100130705A0A1B0GUX0 176 aa-0.96□□□□□ -2.56
RC3H1-206ENST00000531594 A0A1B0GWA3 101 aa-0.96□□□□□ -2.56
RC3H1-206ENST00000531594 MIF4GDA9UHW6 222 aaKnown RBP-0.96□□□□□ -2.56
RC3H1-206ENST00000531594 DR1Q01658 176 aa-0.96□□□□□ -2.56
RC3H1-206ENST00000531594 CATR1Q13166 79 aa-0.96□□□□□ -2.56
RC3H1-206ENST00000531594 Q56UQ5 140 aa-0.96□□□□□ -2.56
RC3H1-206ENST00000531594 SFTA2Q6UW10 78 aa-0.96□□□□□ -2.56
RC3H1-206ENST00000531594 COL6A5A8TX70 2615 aa-0.96□□□□□ -2.56
RC3H1-206ENST00000531594 KIAA0556O60303 1618 aa-0.97□□□□□ -2.56
RC3H1-206ENST00000531594 CUBNO60494 3623 aa-0.97□□□□□ -2.56
RC3H1-206ENST00000531594 SPG11Q96JI7 2443 aa-0.97□□□□□ -2.56
RC3H1-206ENST00000531594 AKAP9Q99996 3911 aa-0.97□□□□□ -2.56
RC3H1-206ENST00000531594 CFTRP13569 1480 aa-0.97□□□□□ -2.56
RC3H1-206ENST00000531594 FMN2Q9NZ56 1722 aa-0.97□□□□□ -2.56
RC3H1-206ENST00000531594 HEPN1Q6WQI6 88 aa-0.97□□□□□ -2.56
RC3H1-206ENST00000531594 COMMD6Q7Z4G1 85 aa-0.97□□□□□ -2.56
RC3H1-206ENST00000531594 C8orf59Q8N0T1 100 aaPredicted RBP-0.97□□□□□ -2.56
RC3H1-206ENST00000531594 CDC42SE2Q9NRR3 84 aa-0.97□□□□□ -2.56
RC3H1-206ENST00000531594 SPEF2Q9C093 1822 aa-0.97□□□□□ -2.56
RC3H1-206ENST00000531594 DNAH11Q96DT5 4516 aa-0.97□□□□□ -2.57
RC3H1-206ENST00000531594 NBEAL2Q6ZNJ1 2754 aa-0.97□□□□□ -2.57
RC3H1-206ENST00000531594 CPSF1Q10570 1443 aaKnown RBP-0.98□□□□□ -2.57
RC3H1-206ENST00000531594 LYSTQ99698 3801 aa-0.98□□□□□ -2.57
RC3H1-206ENST00000531594 APOC2P02655 101 aa-0.98□□□□□ -2.57
RC3H1-206ENST00000531594 TRAPPC2P0DI81 140 aa-0.98□□□□□ -2.57
RC3H1-206ENST00000531594 TRAPPC2BP0DI82 140 aa-0.98□□□□□ -2.57
RC3H1-206ENST00000531594 KRTAP20-1Q3LI63 56 aa-0.98□□□□□ -2.57
RC3H1-206ENST00000531594 C9orf153Q5TBE3 101 aa-0.98□□□□□ -2.57
RC3H1-206ENST00000531594 C5orf38Q86SI9 138 aa-0.98□□□□□ -2.57
RC3H1-206ENST00000531594 SNRNP25Q9BV90 132 aaKnown RBP-0.98□□□□□ -2.57
RC3H1-206ENST00000531594 MANBALQ9NQG1 85 aa-0.98□□□□□ -2.57
RC3H1-206ENST00000531594 PATJQ8NI35 1801 aa-0.99□□□□□ -2.57
RC3H1-206ENST00000531594 TRAV30A0A087WSZ9 112 aa-0.99□□□□□ -2.57
RC3H1-206ENST00000531594 A0A1B0GU69 56 aa-0.99□□□□□ -2.57
RC3H1-206ENST00000531594 FAM223BA6NKX1 122 aa-0.99□□□□□ -2.57
RC3H1-206ENST00000531594 H3BNG1 76 aa-0.99□□□□□ -2.57
RC3H1-206ENST00000531594 K7EP34 96 aa-0.99□□□□□ -2.57
RC3H1-206ENST00000531594 GNG11P61952 73 aa-0.99□□□□□ -2.57
RC3H1-206ENST00000531594 MT1XP80297 61 aa-0.99□□□□□ -2.57
RC3H1-206ENST00000531594 ARL11Q969Q4 196 aa-0.99□□□□□ -2.57
RC3H1-206ENST00000531594 ITPR1Q14643 2758 aa-0.99□□□□□ -2.57
RC3H1-206ENST00000531594 C1orf167Q5SNV9 1468 aa-0.99□□□□□ -2.57
RC3H1-206ENST00000531594 CCDC168Q8NDH2 2452 aa-0.99□□□□□ -2.57
RC3H1-206ENST00000531594 MTORP42345 2549 aa-0.99□□□□□ -2.57
RC3H1-206ENST00000531594 LRRK2Q5S007 2527 aa-0.99□□□□□ -2.57
RC3H1-206ENST00000531594 BTAF1O14981 1849 aa-1□□□□□ -2.57
RC3H1-206ENST00000531594 DOCK2Q92608 1830 aa-1□□□□□ -2.57
RC3H1-206ENST00000531594 MGAM2Q2M2H8 2515 aa-1□□□□□ -2.57
RC3H1-206ENST00000531594 GNG7O60262 68 aa-1□□□□□ -2.57
RC3H1-206ENST00000531594 SNCAP37840 140 aa-1□□□□□ -2.57
RC3H1-206ENST00000531594 BTG2P78543 158 aa-1□□□□□ -2.57
RC3H1-206ENST00000531594 LELP1Q5T871 98 aa-1□□□□□ -2.57
RC3H1-206ENST00000531594 CCDC141Q6ZP82 1450 aa-1□□□□□ -2.57
RC3H1-206ENST00000531594 RIF1Q5UIP0 2472 aaKnown RBP-1□□□□□ -2.57
RC3H1-206ENST00000531594 SACSQ9NZJ4 4579 aa-1.01□□□□□ -2.57
RC3H1-206ENST00000531594 H0YAA0 97 aa-1.01□□□□□ -2.57
RC3H1-206ENST00000531594 DEFB1P60022 68 aa-1.01□□□□□ -2.57
RC3H1-206ENST00000531594 SELENOWP63302 87 aa-1.01□□□□□ -2.57
RC3H1-206ENST00000531594 WFDC13Q8IUB5 93 aa-1.01□□□□□ -2.57
RC3H1-206ENST00000531594 MRPL34Q9BQ48 92 aaKnown RBP-1.01□□□□□ -2.57
RC3H1-206ENST00000531594 NKTRP30414 1462 aaKnown RBP-1.01□□□□□ -2.57
RC3H1-206ENST00000531594 GRIN2AQ12879 1464 aa-1.01□□□□□ -2.57
RC3H1-206ENST00000531594 SLIT1O75093 1534 aa-1.01□□□□□ -2.57
RC3H1-206ENST00000531594 APOBP04114 4563 aaKnown RBP-1.01□□□□□ -2.57
RC3H1-206ENST00000531594 NBASA2RRP1 2371 aa-1.02□□□□□ -2.57
RC3H1-206ENST00000531594 OOSP1A8MZH6 123 aa-1.02□□□□□ -2.57
RC3H1-206ENST00000531594 F6UZH7 168 aa-1.02□□□□□ -2.57
RC3H1-206ENST00000531594 TET3O43151 1660 aa-1.02□□□□□ -2.57
RC3H1-206ENST00000531594 Q0VG73 95 aa-1.02□□□□□ -2.57
RC3H1-206ENST00000531594 TROQ12816 1431 aaPredicted RBP-1.02□□□□□ -2.57
RC3H1-206ENST00000531594 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.02□□□□□ -2.57
RC3H1-206ENST00000531594 LINC00470Q9BZP3 86 aa-1.02□□□□□ -2.57
RC3H1-206ENST00000531594 CDKN2A-AS1Q9UH64 79 aa-1.02□□□□□ -2.57
RC3H1-206ENST00000531594 PSME4Q14997 1843 aa-1.03□□□□□ -2.57
RC3H1-206ENST00000531594 EYSQ5T1H1 3165 aa-1.03□□□□□ -2.57
RC3H1-206ENST00000531594 PLEKHH2Q8IVE3 1493 aa-1.03□□□□□ -2.57
RC3H1-206ENST00000531594 NLRP1Q9C000 1473 aa-1.03□□□□□ -2.57
RC3H1-206ENST00000531594 A0A087WVE0 104 aa-1.03□□□□□ -2.57
RC3H1-206ENST00000531594 COX6CP09669 75 aa-1.03□□□□□ -2.57
RC3H1-206ENST00000531594 C6orf201Q7Z4U5 140 aa-1.03□□□□□ -2.57
RC3H1-206ENST00000531594 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.03□□□□□ -2.57
RC3H1-206ENST00000531594 C12orf57Q99622 126 aa-1.03□□□□□ -2.57
RC3H1-206ENST00000531594 PAPPA2Q9BXP8 1791 aa-1.03□□□□□ -2.58
RC3H1-206ENST00000531594 RELNP78509 3460 aa-1.03□□□□□ -2.58
RC3H1-206ENST00000531594 VPS13BQ7Z7G8 4022 aa-1.04□□□□□ -2.58
RC3H1-206ENST00000531594 SMG6Q86US8 1419 aaKnown RBP-1.04□□□□□ -2.58
RC3H1-206ENST00000531594 UBE2L5PA0A1B0GUS4 154 aa-1.04□□□□□ -2.58
RC3H1-206ENST00000531594 C9orf92A6NGG3 77 aa-1.04□□□□□ -2.58
RC3H1-206ENST00000531594 CCL22O00626 93 aa-1.04□□□□□ -2.58
RC3H1-206ENST00000531594 UBE2L3P68036 154 aaKnown RBP-1.04□□□□□ -2.58
RC3H1-206ENST00000531594 DPH3P1Q9H4G8 78 aa-1.04□□□□□ -2.58
RC3H1-206ENST00000531594 LINC00846Q9NV44 126 aa-1.04□□□□□ -2.58
RC3H1-206ENST00000531594 HIGD1BQ9P298 99 aa-1.04□□□□□ -2.58
RC3H1-206ENST00000531594 PRO1854Q9UHT4 67 aa-1.04□□□□□ -2.58
RC3H1-206ENST00000531594 ACACAQ13085 2346 aa-1.04□□□□□ -2.58
RC3H1-206ENST00000531594 MYOM1P52179 1685 aa-1.04□□□□□ -2.58
RC3H1-206ENST00000531594 DNAH1Q9P2D7 4330 aa-1.04□□□□□ -2.58
RC3H1-206ENST00000531594 A0A0C4DFX4 3053 aa-1.04□□□□□ -2.58
RC3H1-206ENST00000531594 ADGRL2O95490 1459 aa-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 C7orf77A4D0Y5 90 aa-1.05□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms