RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 LINC00469Q8N7U9 141 aa7.82□□□□□ -1.16
C11orf54-210ENST00000531516 UBE2BP63146 152 aa7.81□□□□□ -1.16
C11orf54-210ENST00000531516 C1orf137Q5JT78 98 aa7.81□□□□□ -1.16
C11orf54-210ENST00000531516 ZC2HC1BQ5TFG8 222 aa7.81□□□□□ -1.16
C11orf54-210ENST00000531516 C2orf82Q6UX34 121 aa7.81□□□□□ -1.16
C11orf54-210ENST00000531516 FAM19A5Q7Z5A7 132 aaPredicted RBP7.81□□□□□ -1.16
C11orf54-210ENST00000531516 PHF5AQ7RTV0 110 aaKnown RBP7.8□□□□□ -1.16
C11orf54-210ENST00000531516 LINC01600Q96MT4 127 aa7.8□□□□□ -1.16
C11orf54-210ENST00000531516 PSORS1C2Q9UIG4 136 aa7.8□□□□□ -1.16
C11orf54-210ENST00000531516 TINCRA0A1B0GVN0 87 aa7.79□□□□□ -1.16
C11orf54-210ENST00000531516 F8VRH5 84 aa7.79□□□□□ -1.16
C11orf54-210ENST00000531516 H3BRM9 83 aa7.79□□□□□ -1.16
C11orf54-210ENST00000531516 RAB5BP61020 215 aa7.79□□□□□ -1.16
C11orf54-210ENST00000531516 PMVKQ15126 192 aa7.79□□□□□ -1.16
C11orf54-210ENST00000531516 CDKN2A-AS1Q9UH64 79 aa7.79□□□□□ -1.16
C11orf54-210ENST00000531516 TRAPPC1Q9Y5R8 145 aa7.79□□□□□ -1.16
C11orf54-210ENST00000531516 LINC01546A6NGU7 62 aa7.78□□□□□ -1.16
C11orf54-210ENST00000531516 M0QXV9 152 aa7.78□□□□□ -1.16
C11orf54-210ENST00000531516 PDZD11Q5EBL8 140 aa7.78□□□□□ -1.16
C11orf54-210ENST00000531516 NDUFA6P56556 154 aa7.77□□□□□ -1.17
C11orf54-210ENST00000531516 SRSF9Q13242 221 aaKnown RBP eCLIP7.77□□□□□ -1.17
C11orf54-210ENST00000531516 LBHQ53QV2 105 aaPredicted RBP7.77□□□□□ -1.17
C11orf54-210ENST00000531516 DIRC1Q969H9 104 aa7.77□□□□□ -1.17
C11orf54-210ENST00000531516 YPEL4Q96NS1 127 aa7.77□□□□□ -1.17
C11orf54-210ENST00000531516 CST9LQ9H4G1 147 aa7.77□□□□□ -1.17
C11orf54-210ENST00000531516 FAM168BA1KXE4 195 aa7.76□□□□□ -1.17
C11orf54-210ENST00000531516 CBLN2Q8IUK8 224 aa7.76□□□□□ -1.17
C11orf54-210ENST00000531516 COX7B2Q8TF08 81 aa7.76□□□□□ -1.17
C11orf54-210ENST00000531516 LINC00614P0C842 121 aa7.75□□□□□ -1.17
C11orf54-210ENST00000531516 MT1HL1P0DM35 61 aa7.75□□□□□ -1.17
C11orf54-210ENST00000531516 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
C11orf54-210ENST00000531516 ATP5LO75964 103 aa7.74□□□□□ -1.17
C11orf54-210ENST00000531516 HBDP02042 147 aa7.74□□□□□ -1.17
C11orf54-210ENST00000531516 IGLV7-43P04211 117 aa7.74□□□□□ -1.17
C11orf54-210ENST00000531516 IGLV5-45A0A087WSX0 123 aa7.73□□□□□ -1.17
C11orf54-210ENST00000531516 SMIM1B2RUZ4 78 aa7.73□□□□□ -1.17
C11orf54-210ENST00000531516 C9orf129Q5T035 196 aaKnown RBP7.72□□□□□ -1.17
C11orf54-210ENST00000531516 C18orf32Q8TCD1 76 aa7.72□□□□□ -1.17
C11orf54-210ENST00000531516 XAGE1AQ9HD64 81 aa7.72□□□□□ -1.17
C11orf54-210ENST00000531516 FAT3Q8TDW7 4589 aa7.72□□□□□ -1.17
C11orf54-210ENST00000531516 PKHD1L1Q86WI1 4243 aa7.72□□□□□ -1.17
C11orf54-210ENST00000531516 NUPR1O60356 82 aa7.71□□□□□ -1.18
C11orf54-210ENST00000531516 SPINK8P0C7L1 97 aa7.71□□□□□ -1.18
C11orf54-210ENST00000531516 ODF1Q14990 250 aa7.71□□□□□ -1.18
C11orf54-210ENST00000531516 SFTA2Q6UW10 78 aa7.71□□□□□ -1.18
C11orf54-210ENST00000531516 TP73-AS1Q9UF72 201 aa7.7□□□□□ -1.18
C11orf54-210ENST00000531516 C22orf24Q9Y442 160 aa7.7□□□□□ -1.18
C11orf54-210ENST00000531516 H0Y9J4 135 aa7.69□□□□□ -1.18
C11orf54-210ENST00000531516 IGLC3P0DOY3 106 aa7.69□□□□□ -1.18
C11orf54-210ENST00000531516 BAGE3Q86Y29 109 aa7.69□□□□□ -1.18
C11orf54-210ENST00000531516 NKAPP1Q8N9T2 125 aa7.69□□□□□ -1.18
C11orf54-210ENST00000531516 KRTAP10-8P60410 259 aa7.68□□□□□ -1.18
C11orf54-210ENST00000531516 MRPL55Q7Z7F7 128 aaKnown RBP7.68□□□□□ -1.18
C11orf54-210ENST00000531516 CHCHD1Q96BP2 118 aaKnown RBP7.68□□□□□ -1.18
C11orf54-210ENST00000531516 URB1-AS1Q96HZ7 61 aa7.68□□□□□ -1.18
C11orf54-210ENST00000531516 TMEM170BQ5T4T1 132 aa7.67□□□□□ -1.18
C11orf54-210ENST00000531516 IGLV1-50A0A075B6I6 118 aa7.66□□□□□ -1.18
C11orf54-210ENST00000531516 SCO1O75880 301 aa7.66□□□□□ -1.18
C11orf54-210ENST00000531516 RPL28P46779 137 aaKnown RBP7.66□□□□□ -1.18
C11orf54-210ENST00000531516 PMCHL1Q16048 86 aa7.66□□□□□ -1.18
C11orf54-210ENST00000531516 KRTAP7-1Q8IUC3 87 aa7.66□□□□□ -1.18
C11orf54-210ENST00000531516 A0A096LNJ9 63 aa7.65□□□□□ -1.18
C11orf54-210ENST00000531516 COLCA2A8K830 154 aa7.65□□□□□ -1.18
C11orf54-210ENST00000531516 ZNF861PO60384 105 aa7.65□□□□□ -1.18
C11orf54-210ENST00000531516 TRGC2P03986 189 aa7.65□□□□□ -1.18
C11orf54-210ENST00000531516 ZNF22P17026 224 aaPredicted RBP7.65□□□□□ -1.18
C11orf54-210ENST00000531516 PFN2P35080 140 aa7.65□□□□□ -1.18
C11orf54-210ENST00000531516 RPL13AP40429 203 aaKnown RBP7.65□□□□□ -1.18
C11orf54-210ENST00000531516 COX17Q14061 63 aa7.65□□□□□ -1.18
C11orf54-210ENST00000531516 CHTOPQ9Y3Y2 248 aaKnown RBP7.65□□□□□ -1.18
C11orf54-210ENST00000531516 IGLV5-39A0A0G2JS06 123 aa7.64□□□□□ -1.19
C11orf54-210ENST00000531516 HSBP1O75506 76 aa7.64□□□□□ -1.19
C11orf54-210ENST00000531516 RPL24P83731 157 aaKnown RBP7.64□□□□□ -1.19
C11orf54-210ENST00000531516 BCE1O60756 84 aa7.63□□□□□ -1.19
C11orf54-210ENST00000531516 ATP6V1G1O75348 118 aa7.63□□□□□ -1.19
C11orf54-210ENST00000531516 KRTAP11-1Q8IUC1 163 aa7.63□□□□□ -1.19
C11orf54-210ENST00000531516 IFI27L1Q96BM0 104 aa7.63□□□□□ -1.19
C11orf54-210ENST00000531516 ERG28Q9UKR5 140 aa7.63□□□□□ -1.19
C11orf54-210ENST00000531516 PRR26Q8N8Z3 221 aa7.62□□□□□ -1.19
C11orf54-210ENST00000531516 LINC00167Q96N53 147 aa7.62□□□□□ -1.19
C11orf54-210ENST00000531516 IGLV5-37A0A075B6J1 123 aa7.61□□□□□ -1.19
C11orf54-210ENST00000531516 TRAV12-1A0A0B4J245 112 aa7.61□□□□□ -1.19
C11orf54-210ENST00000531516 GAGE10A6NGK3 116 aa7.61□□□□□ -1.19
C11orf54-210ENST00000531516 C11orf86A6NJI1 115 aa7.61□□□□□ -1.19
C11orf54-210ENST00000531516 RPL37AP8A6NKH3 93 aa7.61□□□□□ -1.19
C11orf54-210ENST00000531516 UBE2AP49459 152 aa7.61□□□□□ -1.19
C11orf54-210ENST00000531516 LINC00587B1AMM8 73 aa7.6□□□□□ -1.19
C11orf54-210ENST00000531516 LINC00158P58513 81 aa7.6□□□□□ -1.19
C11orf54-210ENST00000531516 ZNF625Q96I27 306 aaPredicted RBP7.6□□□□□ -1.19
C11orf54-210ENST00000531516 HMCN2Q8NDA2 5059 aa7.59□□□□□ -1.19
C11orf54-210ENST00000531516 SND1-IT1Q9HBX3 110 aa7.58□□□□□ -1.2
C11orf54-210ENST00000531516 SERF1AO75920 110 aa7.57□□□□□ -1.2
C11orf54-210ENST00000531516 LINC00310P59036 64 aa7.57□□□□□ -1.2
C11orf54-210ENST00000531516 FAM19A2Q8N3H0 131 aa7.57□□□□□ -1.2
C11orf54-210ENST00000531516 HSPB8Q9UJY1 196 aa7.57□□□□□ -1.2
C11orf54-210ENST00000531516 IGKV2-28A0A075B6P5 120 aa7.56□□□□□ -1.2
C11orf54-210ENST00000531516 TMEM223A0PJW6 202 aa7.56□□□□□ -1.2
C11orf54-210ENST00000531516 H0Y8G0 127 aa7.56□□□□□ -1.2
C11orf54-210ENST00000531516 LEPROTL1O95214 131 aa7.56□□□□□ -1.2
C11orf54-210ENST00000531516 IGKV2D-28P01615 120 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms