RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 A0A1B0GUT8 65 aa1.05□□□□□ -2.24
USP47-211ENST00000531513 H3BUT2 72 aa1.05□□□□□ -2.24
USP47-211ENST00000531513 CNFNQ9BYD5 112 aa1.05□□□□□ -2.24
USP47-211ENST00000531513 NCOA2Q15596 1464 aa1.05□□□□□ -2.24
USP47-211ENST00000531513 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
USP47-211ENST00000531513 F5P12259 2224 aa1.04□□□□□ -2.24
USP47-211ENST00000531513 KDM3BQ7LBC6 1761 aa1.04□□□□□ -2.24
USP47-211ENST00000531513 A0A1B0GU69 56 aa1.04□□□□□ -2.24
USP47-211ENST00000531513 SPINK7P58062 85 aa1.04□□□□□ -2.24
USP47-211ENST00000531513 COX6A2Q02221 97 aa1.04□□□□□ -2.24
USP47-211ENST00000531513 CFAP74Q9C0B2 1584 aa1.04□□□□□ -2.24
USP47-211ENST00000531513 DIP2BQ9P265 1576 aa1.04□□□□□ -2.24
USP47-211ENST00000531513 SHPRHQ149N8 1683 aa1.04□□□□□ -2.24
USP47-211ENST00000531513 DEFB121Q5J5C9 76 aa1.03□□□□□ -2.24
USP47-211ENST00000531513 C18orf32Q8TCD1 76 aa1.03□□□□□ -2.24
USP47-211ENST00000531513 SMCO4Q9NRQ5 59 aa1.03□□□□□ -2.24
USP47-211ENST00000531513 ATP7BP35670 1465 aa1.03□□□□□ -2.24
USP47-211ENST00000531513 A0A0G2JMZ2 1700 aa1.02□□□□□ -2.25
USP47-211ENST00000531513 TARBP1Q13395 1621 aaKnown RBP1.02□□□□□ -2.25
USP47-211ENST00000531513 PIGYQ3MUY2 71 aa1.02□□□□□ -2.25
USP47-211ENST00000531513 SAMD9Q5K651 1589 aa1.02□□□□□ -2.25
USP47-211ENST00000531513 ATP5EP2Q5VTU8 51 aa1.02□□□□□ -2.25
USP47-211ENST00000531513 KNDC1Q76NI1 1749 aa1.02□□□□□ -2.25
USP47-211ENST00000531513 UBR1Q8IWV7 1749 aa1.02□□□□□ -2.25
USP47-211ENST00000531513 XRN1Q8IZH2 1706 aaKnown RBP1.02□□□□□ -2.25
USP47-211ENST00000531513 FAM103A1Q9BTL3 118 aaKnown RBP1.02□□□□□ -2.25
USP47-211ENST00000531513 WNK3Q9BYP7 1800 aa1.02□□□□□ -2.25
USP47-211ENST00000531513 PTPN23Q9H3S7 1636 aa1.02□□□□□ -2.25
USP47-211ENST00000531513 SETBP1Q9Y6X0 1596 aa1.01□□□□□ -2.25
USP47-211ENST00000531513 NKTRP30414 1462 aaKnown RBP1.01□□□□□ -2.25
USP47-211ENST00000531513 CCDC141Q6ZP82 1450 aa1.01□□□□□ -2.25
USP47-211ENST00000531513 PDCD5O14737 125 aa1.01□□□□□ -2.25
USP47-211ENST00000531513 NDUFB1O75438 58 aa1.01□□□□□ -2.25
USP47-211ENST00000531513 TP53AIP1Q9HCN2 124 aa1.01□□□□□ -2.25
USP47-211ENST00000531513 TULP4Q9NRJ4 1543 aa1□□□□□ -2.25
USP47-211ENST00000531513 CRYBG1Q9Y4K1 1723 aa1□□□□□ -2.25
USP47-211ENST00000531513 C5P01031 1676 aa1□□□□□ -2.25
USP47-211ENST00000531513 ALKQ9UM73 1620 aa1□□□□□ -2.25
USP47-211ENST00000531513 CCDC88BA6NC98 1476 aa0.99□□□□□ -2.25
USP47-211ENST00000531513 MYH4Q9Y623 1939 aa0.99□□□□□ -2.25
USP47-211ENST00000531513 LINC00959A0A1B0GUT2 108 aa0.99□□□□□ -2.25
USP47-211ENST00000531513 SMIM13P0DJ93 91 aa0.99□□□□□ -2.25
USP47-211ENST00000531513 MYO7BQ6PIF6 2116 aa0.99□□□□□ -2.25
USP47-211ENST00000531513 URB2Q14146 1524 aaKnown RBP0.99□□□□□ -2.25
USP47-211ENST00000531513 AHNAK2Q8IVF2 5795 aa0.98□□□□□ -2.25
USP47-211ENST00000531513 ZNF462Q96JM2 2506 aa0.98□□□□□ -2.25
USP47-211ENST00000531513 UMAD1C9J7I0 102 aa0.98□□□□□ -2.25
USP47-211ENST00000531513 CFDP00746 253 aaPredicted RBP0.98□□□□□ -2.25
USP47-211ENST00000531513 TMEM131LA2VDJ0 1609 aa0.97□□□□□ -2.25
USP47-211ENST00000531513 PLXNB2O15031 1838 aa0.97□□□□□ -2.25
USP47-211ENST00000531513 I3L2K1 104 aa0.97□□□□□ -2.25
USP47-211ENST00000531513 DEFB112Q30KQ8 113 aa0.97□□□□□ -2.25
USP47-211ENST00000531513 DEFB123Q8N688 67 aa0.97□□□□□ -2.25
USP47-211ENST00000531513 USMG5Q96IX5 58 aa0.97□□□□□ -2.25
USP47-211ENST00000531513 PRO0255Q9UI72 69 aa0.97□□□□□ -2.25
USP47-211ENST00000531513 ASH1LQ9NR48 2969 aaKnown RBP0.97□□□□□ -2.25
USP47-211ENST00000531513 DEFA5Q01523 94 aa0.96□□□□□ -2.26
USP47-211ENST00000531513 LAMC1P11047 1609 aa0.96□□□□□ -2.26
USP47-211ENST00000531513 NHSL1Q5SYE7 1610 aa0.96□□□□□ -2.26
USP47-211ENST00000531513 ABCA8O94911 1581 aa0.96□□□□□ -2.26
USP47-211ENST00000531513 A0A087WXM4 84 aa0.95□□□□□ -2.26
USP47-211ENST00000531513 HMGA1P17096 107 aaKnown RBP0.95□□□□□ -2.26
USP47-211ENST00000531513 IFI27P40305 119 aaPredicted RBP0.95□□□□□ -2.26
USP47-211ENST00000531513 Q8IZM0 81 aa0.95□□□□□ -2.26
USP47-211ENST00000531513 KIAA0556O60303 1618 aa0.95□□□□□ -2.26
USP47-211ENST00000531513 JMJD1CQ15652 2540 aa0.95□□□□□ -2.26
USP47-211ENST00000531513 LRRC37AA6NMS7 1700 aa0.95□□□□□ -2.26
USP47-211ENST00000531513 ZFHX3Q15911 3703 aa0.94□□□□□ -2.26
USP47-211ENST00000531513 PAPPA2Q9BXP8 1791 aa0.94□□□□□ -2.26
USP47-211ENST00000531513 RPL38P63173 70 aaKnown RBP0.94□□□□□ -2.26
USP47-211ENST00000531513 GAFA1Q96PS6 74 aa0.94□□□□□ -2.26
USP47-211ENST00000531513 TRAV21A0A0B4J279 112 aa0.93□□□□□ -2.26
USP47-211ENST00000531513 SMIM31A0A1B0GVY4 71 aa0.93□□□□□ -2.26
USP47-211ENST00000531513 KRTAP19-3Q7Z4W3 81 aa0.93□□□□□ -2.26
USP47-211ENST00000531513 CRIPTQ9P021 101 aa0.93□□□□□ -2.26
USP47-211ENST00000531513 UGGT2Q9NYU1 1516 aa0.93□□□□□ -2.26
USP47-211ENST00000531513 PAPPAQ13219 1627 aa0.93□□□□□ -2.26
USP47-211ENST00000531513 CADP27708 2225 aa0.92□□□□□ -2.26
USP47-211ENST00000531513 MYO7AQ13402 2215 aa0.92□□□□□ -2.26
USP47-211ENST00000531513 SPTY2D1-AS1A0A0U1RR47 76 aa0.92□□□□□ -2.26
USP47-211ENST00000531513 COX8AP10176 69 aa0.92□□□□□ -2.26
USP47-211ENST00000531513 COX7BP24311 80 aa0.92□□□□□ -2.26
USP47-211ENST00000531513 WFDC9Q8NEX5 89 aa0.92□□□□□ -2.26
USP47-211ENST00000531513 LRRC7Q96NW7 1537 aa0.92□□□□□ -2.26
USP47-211ENST00000531513 DUOX2Q9NRD8 1548 aa0.92□□□□□ -2.26
USP47-211ENST00000531513 NAV3Q8IVL0 2385 aa0.92□□□□□ -2.26
USP47-211ENST00000531513 PKD1L3Q7Z443 1732 aa0.92□□□□□ -2.26
USP47-211ENST00000531513 RGPD8O14715 1765 aaPredicted RBP0.91□□□□□ -2.26
USP47-211ENST00000531513 RGPD5Q99666 1765 aa0.91□□□□□ -2.26
USP47-211ENST00000531513 SLIT1O75093 1534 aa0.91□□□□□ -2.26
USP47-211ENST00000531513 MAGI3Q5TCQ9 1506 aa0.9□□□□□ -2.26
USP47-211ENST00000531513 FXYD6-FXYD2A0A087WZ82 144 aa0.9□□□□□ -2.27
USP47-211ENST00000531513 I3L3M4 83 aa0.9□□□□□ -2.27
USP47-211ENST00000531513 K7EQZ3 153 aa0.9□□□□□ -2.27
USP47-211ENST00000531513 COX6B1P14854 86 aa0.9□□□□□ -2.27
USP47-211ENST00000531513 HEPN1Q6WQI6 88 aa0.9□□□□□ -2.27
USP47-211ENST00000531513 DNAJC13O75165 2243 aa0.9□□□□□ -2.27
USP47-211ENST00000531513 CACNA1CQ13936 2221 aa0.9□□□□□ -2.27
USP47-211ENST00000531513 ASXL3Q9C0F0 2248 aa0.9□□□□□ -2.27
USP47-211ENST00000531513 PIK3C2BO00750 1634 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms