RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 CXCL5P42830 114 aa6.64□□□□□ -1.35
CTNND1-228ENST00000531007 FOXI1Q12951 378 aa6.64□□□□□ -1.35
CTNND1-228ENST00000531007 CLPSL2Q6UWE3 100 aa6.64□□□□□ -1.35
CTNND1-228ENST00000531007 PCP2Q8IVA1 136 aa6.64□□□□□ -1.35
CTNND1-228ENST00000531007 PCP4L1A6NKN8 68 aa6.63□□□□□ -1.35
CTNND1-228ENST00000531007 NDUFA1O15239 70 aa6.63□□□□□ -1.35
CTNND1-228ENST00000531007 TAL2Q16559 108 aa6.63□□□□□ -1.35
CTNND1-228ENST00000531007 CFAP161Q6P656 301 aa6.63□□□□□ -1.35
CTNND1-228ENST00000531007 Q6ZVH6 145 aa6.63□□□□□ -1.35
CTNND1-228ENST00000531007 Q8IZM0 81 aa6.63□□□□□ -1.35
CTNND1-228ENST00000531007 COX7B2Q8TF08 81 aa6.63□□□□□ -1.35
CTNND1-228ENST00000531007 TM2D2Q9BX73 214 aa6.63□□□□□ -1.35
CTNND1-228ENST00000531007 NDUFA12Q9UI09 145 aa6.63□□□□□ -1.35
CTNND1-228ENST00000531007 IGHV3-64A0A075B6Q5 118 aa6.62□□□□□ -1.35
CTNND1-228ENST00000531007 GAGE12HA6NDE8 117 aa6.62□□□□□ -1.35
CTNND1-228ENST00000531007 TIMM17BO60830 172 aa6.62□□□□□ -1.35
CTNND1-228ENST00000531007 PRSS2P07478 247 aa6.62□□□□□ -1.35
CTNND1-228ENST00000531007 CIRBPQ14011 172 aaKnown RBP6.62□□□□□ -1.35
CTNND1-228ENST00000531007 SCGB1D4Q6XE38 83 aa6.62□□□□□ -1.35
CTNND1-228ENST00000531007 C5orf38Q86SI9 138 aa6.62□□□□□ -1.35
CTNND1-228ENST00000531007 IGLV10-54A0A075B6I4 117 aa6.61□□□□□ -1.35
CTNND1-228ENST00000531007 TMEM238C9JI98 176 aa6.61□□□□□ -1.35
CTNND1-228ENST00000531007 M0R143 59 aa6.61□□□□□ -1.35
CTNND1-228ENST00000531007 TSPEAR-AS2P59090 65 aa6.61□□□□□ -1.35
CTNND1-228ENST00000531007 HSD52Q0P140 79 aa6.61□□□□□ -1.35
CTNND1-228ENST00000531007 C6orf226Q5I0X4 101 aa6.61□□□□□ -1.35
CTNND1-228ENST00000531007 C2orf91Q6ZV80 131 aa6.61□□□□□ -1.35
CTNND1-228ENST00000531007 MAPKAPK5-AS1Q8N8E1 139 aa6.61□□□□□ -1.35
CTNND1-228ENST00000531007 COPS9Q8WXC6 57 aa6.61□□□□□ -1.35
CTNND1-228ENST00000531007 SPANXB1Q9NS25 103 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-228ENST00000531007 IGKV2D-24A0A075B6R9 120 aa6.6□□□□□ -1.35
CTNND1-228ENST00000531007 ZNF625Q96I27 306 aaPredicted RBP6.6□□□□□ -1.35
CTNND1-228ENST00000531007 A0A0J9YXY3 114 aa6.59□□□□□ -1.35
CTNND1-228ENST00000531007 CKS1BP61024 79 aa6.59□□□□□ -1.35
CTNND1-228ENST00000531007 CTAG1AP78358 180 aa6.59□□□□□ -1.35
CTNND1-228ENST00000531007 LBHQ53QV2 105 aaPredicted RBP6.59□□□□□ -1.35
CTNND1-228ENST00000531007 KRTAP26-1Q6PEX3 210 aa6.59□□□□□ -1.35
CTNND1-228ENST00000531007 ORAOV1Q8WV07 137 aa6.59□□□□□ -1.35
CTNND1-228ENST00000531007 PPDPFQ9H3Y8 114 aa6.59□□□□□ -1.35
CTNND1-228ENST00000531007 CSMD3Q7Z407 3707 aa6.59□□□□□ -1.35
CTNND1-228ENST00000531007 NBDYA0A0U1RRE5 68 aa6.58□□□□□ -1.36
CTNND1-228ENST00000531007 COX17Q14061 63 aa6.58□□□□□ -1.36
CTNND1-228ENST00000531007 C2orf48Q96LS8 159 aa6.58□□□□□ -1.36
CTNND1-228ENST00000531007 TTTY13Q9BZ97 58 aa6.58□□□□□ -1.36
CTNND1-228ENST00000531007 TOMM7Q9P0U1 55 aa6.58□□□□□ -1.36
CTNND1-228ENST00000531007 TP73-AS1Q9UF72 201 aa6.58□□□□□ -1.36
CTNND1-228ENST00000531007 ZNF561-AS1K7EIQ3 104 aa6.57□□□□□ -1.36
CTNND1-228ENST00000531007 IFITM1P13164 125 aa6.57□□□□□ -1.36
CTNND1-228ENST00000531007 SPAG11BQ08648 103 aa6.57□□□□□ -1.36
CTNND1-228ENST00000531007 SRSF9Q13242 221 aaKnown RBP eCLIP6.57□□□□□ -1.36
CTNND1-228ENST00000531007 KIAA0087Q14695 138 aa6.57□□□□□ -1.36
CTNND1-228ENST00000531007 CASC10Q5T4H9 136 aa6.57□□□□□ -1.36
CTNND1-228ENST00000531007 HIST1H4GQ99525 98 aa6.57□□□□□ -1.36
CTNND1-228ENST00000531007 SPANXDQ9BXN6 97 aa6.57□□□□□ -1.36
CTNND1-228ENST00000531007 SPANXCQ9NY87 97 aa6.57□□□□□ -1.36
CTNND1-228ENST00000531007 GVQW2A0A096LPI5 108 aaPredicted RBP6.56□□□□□ -1.36
CTNND1-228ENST00000531007 PTTG1IPP53801 180 aa6.56□□□□□ -1.36
CTNND1-228ENST00000531007 Q9HAA7 133 aa6.56□□□□□ -1.36
CTNND1-228ENST00000531007 C14orf177Q52M58 125 aa6.55□□□□□ -1.36
CTNND1-228ENST00000531007 MEIG1Q5JSS6 88 aa6.55□□□□□ -1.36
CTNND1-228ENST00000531007 CEND1Q8N111 149 aa6.55□□□□□ -1.36
CTNND1-228ENST00000531007 NTN5Q8WTR8 489 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-228ENST00000531007 KRTAP3-1Q9BYR8 98 aa6.55□□□□□ -1.36
CTNND1-228ENST00000531007 TRBV30A0A0K0K1B3 111 aa6.54□□□□□ -1.36
CTNND1-228ENST00000531007 A6NDN8 102 aa6.54□□□□□ -1.36
CTNND1-228ENST00000531007 RPL24P83731 157 aaKnown RBP6.54□□□□□ -1.36
CTNND1-228ENST00000531007 STARD9Q9P2P6 4700 aa6.54□□□□□ -1.36
CTNND1-228ENST00000531007 PLECQ15149 4684 aaKnown RBP6.53□□□□□ -1.36
CTNND1-228ENST00000531007 PSCAO43653 123 aa6.53□□□□□ -1.36
CTNND1-228ENST00000531007 RNF151Q2KHN1 245 aa6.53□□□□□ -1.36
CTNND1-228ENST00000531007 BVES-AS1Q5T3Y7 98 aa6.53□□□□□ -1.36
CTNND1-228ENST00000531007 C15orf56Q8N910 161 aa6.53□□□□□ -1.36
CTNND1-228ENST00000531007 LITAFQ99732 161 aa6.53□□□□□ -1.36
CTNND1-228ENST00000531007 ERG28Q9UKR5 140 aa6.53□□□□□ -1.36
CTNND1-228ENST00000531007 HINT1P49773 126 aaPredicted RBP6.52□□□□□ -1.37
CTNND1-228ENST00000531007 COL5A1-AS1Q5SY13 56 aa6.52□□□□□ -1.37
CTNND1-228ENST00000531007 LINC00476Q8WZB0 136 aa6.52□□□□□ -1.37
CTNND1-228ENST00000531007 KRTAP1-5Q9BYS1 174 aa6.52□□□□□ -1.37
CTNND1-228ENST00000531007 TENM2Q9NT68 2774 aa6.52□□□□□ -1.37
CTNND1-228ENST00000531007 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-228ENST00000531007 Q6ZR54 194 aa6.51□□□□□ -1.37
CTNND1-228ENST00000531007 CAMK2N2Q96S95 79 aa6.51□□□□□ -1.37
CTNND1-228ENST00000531007 SNHG12Q9BXW3 62 aa6.51□□□□□ -1.37
CTNND1-228ENST00000531007 PKIGQ9Y2B9 76 aa6.51□□□□□ -1.37
CTNND1-228ENST00000531007 LOC107984156A0A0G2JMH3 177 aa6.5□□□□□ -1.37
CTNND1-228ENST00000531007 USP17L23D6RBM5 183 aa6.5□□□□□ -1.37
CTNND1-228ENST00000531007 SMIM13P0DJ93 91 aa6.5□□□□□ -1.37
CTNND1-228ENST00000531007 LINC00158P58513 81 aa6.5□□□□□ -1.37
CTNND1-228ENST00000531007 ARL17AQ8IVW1 177 aa6.5□□□□□ -1.37
CTNND1-228ENST00000531007 C6orf223Q8N319 242 aa6.5□□□□□ -1.37
CTNND1-228ENST00000531007 LYSTQ99698 3801 aa6.5□□□□□ -1.37
CTNND1-228ENST00000531007 DNAH1Q9P2D7 4330 aa6.49□□□□□ -1.37
CTNND1-228ENST00000531007 VPS13DQ5THJ4 4388 aa6.49□□□□□ -1.37
CTNND1-228ENST00000531007 LY6G6CO95867 125 aa6.49□□□□□ -1.37
CTNND1-228ENST00000531007 SYCNQ0VAF6 134 aa6.49□□□□□ -1.37
CTNND1-228ENST00000531007 ADAMTSL4-AS1Q5T5F5 129 aa6.49□□□□□ -1.37
CTNND1-228ENST00000531007 C2orf82Q6UX34 121 aa6.49□□□□□ -1.37
CTNND1-228ENST00000531007 LINC00308Q8TCZ7 52 aa6.49□□□□□ -1.37
CTNND1-228ENST00000531007 A0A1B0GWB2 263 aa6.48□□□□□ -1.37
CTNND1-228ENST00000531007 CNBPP62633 177 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms