RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 PSORS1C2Q9UIG4 136 aa7.42□□□□□ -1.22
COPB1-206ENST00000529210 PLA2G2DQ9UNK4 145 aa7.42□□□□□ -1.22
COPB1-206ENST00000529210 KRTAP10-8P60410 259 aa7.41□□□□□ -1.22
COPB1-206ENST00000529210 PHF5AQ7RTV0 110 aaKnown RBP7.41□□□□□ -1.22
COPB1-206ENST00000529210 IGLV5-45A0A087WSX0 123 aa7.4□□□□□ -1.22
COPB1-206ENST00000529210 C2orf82Q6UX34 121 aa7.4□□□□□ -1.22
COPB1-206ENST00000529210 KRTAP7-1Q8IUC3 87 aa7.4□□□□□ -1.22
COPB1-206ENST00000529210 PACRGQ96M98 296 aaPredicted RBP7.4□□□□□ -1.22
COPB1-206ENST00000529210 CDKN2A-AS1Q9UH64 79 aa7.4□□□□□ -1.22
COPB1-206ENST00000529210 CXCL5P42830 114 aa7.39□□□□□ -1.23
COPB1-206ENST00000529210 SCGB3A1Q96QR1 104 aa7.39□□□□□ -1.23
COPB1-206ENST00000529210 TINCRA0A1B0GVN0 87 aa7.38□□□□□ -1.23
COPB1-206ENST00000529210 FAM168BA1KXE4 195 aa7.38□□□□□ -1.23
COPB1-206ENST00000529210 PRSS2P07478 247 aa7.38□□□□□ -1.23
COPB1-206ENST00000529210 GAGE2EQ4V326 116 aa7.38□□□□□ -1.23
COPB1-206ENST00000529210 C6orf226Q5I0X4 101 aa7.38□□□□□ -1.23
COPB1-206ENST00000529210 C9orf129Q5T035 196 aaKnown RBP7.38□□□□□ -1.23
COPB1-206ENST00000529210 MRPL18Q9H0U6 180 aaKnown RBP7.38□□□□□ -1.23
COPB1-206ENST00000529210 GEMIN7Q9H840 131 aaKnown RBP7.38□□□□□ -1.23
COPB1-206ENST00000529210 GAGE2DQ9UEU5 116 aa7.38□□□□□ -1.23
COPB1-206ENST00000529210 LOC100996750A0A140TA64 210 aa7.37□□□□□ -1.23
COPB1-206ENST00000529210 CKS1BP61024 79 aa7.37□□□□□ -1.23
COPB1-206ENST00000529210 PDZD11Q5EBL8 140 aa7.37□□□□□ -1.23
COPB1-206ENST00000529210 C1orf137Q5JT78 98 aa7.37□□□□□ -1.23
COPB1-206ENST00000529210 KRTAP4-6Q9BYQ5 205 aa7.37□□□□□ -1.23
COPB1-206ENST00000529210 RPS10P5Q9NQ39 176 aa7.37□□□□□ -1.23
COPB1-206ENST00000529210 SMIM1B2RUZ4 78 aa7.36□□□□□ -1.23
COPB1-206ENST00000529210 F8VRH5 84 aa7.36□□□□□ -1.23
COPB1-206ENST00000529210 IGLV7-43P04211 117 aa7.36□□□□□ -1.23
COPB1-206ENST00000529210 FABP9Q0Z7S8 132 aa7.36□□□□□ -1.23
COPB1-206ENST00000529210 FA2HQ7L5A8 372 aa7.36□□□□□ -1.23
COPB1-206ENST00000529210 FAM19A5Q7Z5A7 132 aaPredicted RBP7.36□□□□□ -1.23
COPB1-206ENST00000529210 KRTAP11-1Q8IUC1 163 aa7.36□□□□□ -1.23
COPB1-206ENST00000529210 CST9LQ9H4G1 147 aa7.36□□□□□ -1.23
COPB1-206ENST00000529210 TOMM7Q9P0U1 55 aa7.36□□□□□ -1.23
COPB1-206ENST00000529210 M0QXV9 152 aa7.35□□□□□ -1.23
COPB1-206ENST00000529210 PMVKQ15126 192 aa7.35□□□□□ -1.23
COPB1-206ENST00000529210 A0A096LNJ9 63 aa7.34□□□□□ -1.23
COPB1-206ENST00000529210 LINC00469Q8N7U9 141 aa7.34□□□□□ -1.23
COPB1-206ENST00000529210 SMCO4Q9NRQ5 59 aa7.34□□□□□ -1.23
COPB1-206ENST00000529210 C18orf32Q8TCD1 76 aa7.33□□□□□ -1.24
COPB1-206ENST00000529210 DIRC1Q969H9 104 aa7.33□□□□□ -1.24
COPB1-206ENST00000529210 URB1-AS1Q96HZ7 61 aa7.33□□□□□ -1.24
COPB1-206ENST00000529210 TP73-AS1Q9UF72 201 aa7.33□□□□□ -1.24
COPB1-206ENST00000529210 H0Y9J4 135 aa7.32□□□□□ -1.24
COPB1-206ENST00000529210 SNAPINO95295 136 aa7.32□□□□□ -1.24
COPB1-206ENST00000529210 LINC00614P0C842 121 aa7.32□□□□□ -1.24
COPB1-206ENST00000529210 SVBPQ8N300 66 aa7.32□□□□□ -1.24
COPB1-206ENST00000529210 COX7B2Q8TF08 81 aa7.32□□□□□ -1.24
COPB1-206ENST00000529210 TRAPPC1Q9Y5R8 145 aa7.32□□□□□ -1.24
COPB1-206ENST00000529210 IGLC3P0DOY3 106 aa7.31□□□□□ -1.24
COPB1-206ENST00000529210 UBE2BP63146 152 aa7.31□□□□□ -1.24
COPB1-206ENST00000529210 IGLV5-39A0A0G2JS06 123 aa7.3□□□□□ -1.24
COPB1-206ENST00000529210 NUPR1O60356 82 aa7.3□□□□□ -1.24
COPB1-206ENST00000529210 HBDP02042 147 aa7.3□□□□□ -1.24
COPB1-206ENST00000529210 APOC3P02656 99 aa7.3□□□□□ -1.24
COPB1-206ENST00000529210 NDUFA5Q16718 116 aa7.3□□□□□ -1.24
COPB1-206ENST00000529210 LBHQ53QV2 105 aaPredicted RBP7.3□□□□□ -1.24
COPB1-206ENST00000529210 YPEL4Q96NS1 127 aa7.3□□□□□ -1.24
COPB1-206ENST00000529210 C22orf24Q9Y442 160 aa7.3□□□□□ -1.24
COPB1-206ENST00000529210 H3BRM9 83 aa7.29□□□□□ -1.24
COPB1-206ENST00000529210 RAB5BP61020 215 aa7.29□□□□□ -1.24
COPB1-206ENST00000529210 XAGE1AQ9HD64 81 aa7.29□□□□□ -1.24
COPB1-206ENST00000529210 IGLV5-37A0A075B6J1 123 aa7.28□□□□□ -1.24
COPB1-206ENST00000529210 KRTAP1-4P0C5Y4 121 aa7.28□□□□□ -1.24
COPB1-206ENST00000529210 SPINK8P0C7L1 97 aa7.28□□□□□ -1.24
COPB1-206ENST00000529210 LRP2P98164 4655 aa7.28□□□□□ -1.24
COPB1-206ENST00000529210 IGLV1-50A0A075B6I6 118 aa7.27□□□□□ -1.25
COPB1-206ENST00000529210 ZNF861PO60384 105 aa7.27□□□□□ -1.25
COPB1-206ENST00000529210 ATP5LO75964 103 aa7.27□□□□□ -1.25
COPB1-206ENST00000529210 MRPL55Q7Z7F7 128 aaKnown RBP7.27□□□□□ -1.25
COPB1-206ENST00000529210 UBR4Q5T4S7 5183 aa7.27□□□□□ -1.25
COPB1-206ENST00000529210 ZNF22P17026 224 aaPredicted RBP7.26□□□□□ -1.25
COPB1-206ENST00000529210 SFTA2Q6UW10 78 aa7.25□□□□□ -1.25
COPB1-206ENST00000529210 CHCHD1Q96BP2 118 aaKnown RBP7.25□□□□□ -1.25
COPB1-206ENST00000529210 COX17Q14061 63 aa7.24□□□□□ -1.25
COPB1-206ENST00000529210 PRR26Q8N8Z3 221 aa7.24□□□□□ -1.25
COPB1-206ENST00000529210 TRAV12-1A0A0B4J245 112 aa7.23□□□□□ -1.25
COPB1-206ENST00000529210 C11orf86A6NJI1 115 aa7.23□□□□□ -1.25
COPB1-206ENST00000529210 PMCHL1Q16048 86 aa7.23□□□□□ -1.25
COPB1-206ENST00000529210 LINC00167Q96N53 147 aa7.23□□□□□ -1.25
COPB1-206ENST00000529210 BCE1O60756 84 aa7.22□□□□□ -1.25
COPB1-206ENST00000529210 RPL13AP40429 203 aaKnown RBP7.22□□□□□ -1.25
COPB1-206ENST00000529210 NDUFA6P56556 154 aa7.22□□□□□ -1.25
COPB1-206ENST00000529210 BAGE3Q86Y29 109 aa7.22□□□□□ -1.25
COPB1-206ENST00000529210 ERG28Q9UKR5 140 aa7.21□□□□□ -1.26
COPB1-206ENST00000529210 RPL28P46779 137 aaKnown RBP7.2□□□□□ -1.26
COPB1-206ENST00000529210 KRTAP13-1Q8IUC0 172 aa7.2□□□□□ -1.26
COPB1-206ENST00000529210 ZNF625Q96I27 306 aaPredicted RBP7.2□□□□□ -1.26
COPB1-206ENST00000529210 CHTOPQ9Y3Y2 248 aaKnown RBP7.2□□□□□ -1.26
COPB1-206ENST00000529210 VPREB1P12018 145 aa7.19□□□□□ -1.26
COPB1-206ENST00000529210 TMEM170BQ5T4T1 132 aa7.19□□□□□ -1.26
COPB1-206ENST00000529210 NKAPP1Q8N9T2 125 aa7.19□□□□□ -1.26
COPB1-206ENST00000529210 IFI27L1Q96BM0 104 aa7.19□□□□□ -1.26
COPB1-206ENST00000529210 SND1-IT1Q9HBX3 110 aa7.19□□□□□ -1.26
COPB1-206ENST00000529210 TMEM223A0PJW6 202 aa7.18□□□□□ -1.26
COPB1-206ENST00000529210 PFN2P35080 140 aa7.18□□□□□ -1.26
COPB1-206ENST00000529210 RPL37AP8A6NKH3 93 aa7.17□□□□□ -1.26
COPB1-206ENST00000529210 RPL24P83731 157 aaKnown RBP7.17□□□□□ -1.26
COPB1-206ENST00000529210 CBLN2Q8IUK8 224 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms