RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 JOSD1Q15040 202 aaPredicted RBP5.78□□□□□ -1.48
CMTM1-210ENST00000528441 Q6ZRU5 148 aa5.78□□□□□ -1.48
CMTM1-210ENST00000528441 VCX2Q9H322 139 aa5.78□□□□□ -1.48
CMTM1-210ENST00000528441 NXT2Q9NPJ8 142 aaKnown RBP5.78□□□□□ -1.48
CMTM1-210ENST00000528441 TOMM7Q9P0U1 55 aa5.78□□□□□ -1.48
CMTM1-210ENST00000528441 LINC01546A6NGU7 62 aa5.77□□□□□ -1.49
CMTM1-210ENST00000528441 PAPPA-AS1Q5QFB9 102 aa5.77□□□□□ -1.49
CMTM1-210ENST00000528441 BAGE3Q86Y29 109 aa5.77□□□□□ -1.49
CMTM1-210ENST00000528441 OR10D4PQ8NGN7 298 aa5.77□□□□□ -1.49
CMTM1-210ENST00000528441 C12orf57Q99622 126 aa5.77□□□□□ -1.49
CMTM1-210ENST00000528441 IGLV4-3A0A075B6K6 122 aa5.76□□□□□ -1.49
CMTM1-210ENST00000528441 A0A0J9YXV3 536 aa5.76□□□□□ -1.49
CMTM1-210ENST00000528441 NUPR1O60356 82 aa5.76□□□□□ -1.49
CMTM1-210ENST00000528441 SERF1AO75920 110 aa5.76□□□□□ -1.49
CMTM1-210ENST00000528441 FABP4P15090 132 aa5.76□□□□□ -1.49
CMTM1-210ENST00000528441 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
CMTM1-210ENST00000528441 PYY3Q5JQD4 70 aa5.76□□□□□ -1.49
CMTM1-210ENST00000528441 FA2HQ7L5A8 372 aa5.76□□□□□ -1.49
CMTM1-210ENST00000528441 C2orf48Q96LS8 159 aa5.76□□□□□ -1.49
CMTM1-210ENST00000528441 GEMIN7Q9H840 131 aaKnown RBP5.76□□□□□ -1.49
CMTM1-210ENST00000528441 PLAC8Q9NZF1 115 aa5.76□□□□□ -1.49
CMTM1-210ENST00000528441 LINC00614P0C842 121 aa5.75□□□□□ -1.49
CMTM1-210ENST00000528441 PTTG1IPP53801 180 aa5.75□□□□□ -1.49
CMTM1-210ENST00000528441 CIRBPQ14011 172 aaKnown RBP5.75□□□□□ -1.49
CMTM1-210ENST00000528441 ZC2HC1BQ5TFG8 222 aa5.75□□□□□ -1.49
CMTM1-210ENST00000528441 PYGO1Q9Y3Y4 419 aa5.75□□□□□ -1.49
CMTM1-210ENST00000528441 KRTAP29-1A8MX34 341 aaPredicted RBP5.74□□□□□ -1.49
CMTM1-210ENST00000528441 K7EMI3 77 aa5.74□□□□□ -1.49
CMTM1-210ENST00000528441 CKS1BP61024 79 aa5.74□□□□□ -1.49
CMTM1-210ENST00000528441 GAGE2EQ4V326 116 aa5.74□□□□□ -1.49
CMTM1-210ENST00000528441 SCGB3A1Q96QR1 104 aa5.74□□□□□ -1.49
CMTM1-210ENST00000528441 GAGE2DQ9UEU5 116 aa5.74□□□□□ -1.49
CMTM1-210ENST00000528441 DMBT1Q9UGM3 2413 aaPredicted RBP5.73□□□□□ -1.49
CMTM1-210ENST00000528441 OXTP01178 125 aa5.73□□□□□ -1.49
CMTM1-210ENST00000528441 SEC11AP67812 179 aa5.73□□□□□ -1.49
CMTM1-210ENST00000528441 URB1-AS1Q96HZ7 61 aa5.73□□□□□ -1.49
CMTM1-210ENST00000528441 KRTAP4-9Q9BYQ8 210 aa5.73□□□□□ -1.49
CMTM1-210ENST00000528441 A0A087WZ39 114 aa5.72□□□□□ -1.49
CMTM1-210ENST00000528441 IGHV3OR16-9A0A0B4J2B5 98 aa5.72□□□□□ -1.49
CMTM1-210ENST00000528441 F8WDY8 70 aa5.72□□□□□ -1.49
CMTM1-210ENST00000528441 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.72□□□□□ -1.49
CMTM1-210ENST00000528441 HSBP1O75506 76 aa5.72□□□□□ -1.49
CMTM1-210ENST00000528441 UBE2D1P51668 147 aa5.72□□□□□ -1.49
CMTM1-210ENST00000528441 HNRNPA3P51991 378 aaKnown RBP5.72□□□□□ -1.49
CMTM1-210ENST00000528441 HERVK_113P63121 156 aa5.72□□□□□ -1.49
CMTM1-210ENST00000528441 C9orf116Q5BN46 136 aaPredicted RBP5.72□□□□□ -1.49
CMTM1-210ENST00000528441 C6orf226Q5I0X4 101 aa5.72□□□□□ -1.49
CMTM1-210ENST00000528441 LINC00242Q5T6M2 205 aa5.72□□□□□ -1.49
CMTM1-210ENST00000528441 UNQ6190/PRO20217Q6UXQ8 127 aa5.72□□□□□ -1.49
CMTM1-210ENST00000528441 FAM19A5Q7Z5A7 132 aaPredicted RBP5.72□□□□□ -1.49
CMTM1-210ENST00000528441 LINC00469Q8N7U9 141 aa5.72□□□□□ -1.49
CMTM1-210ENST00000528441 MRPL35Q9NZE8 188 aaKnown RBP5.72□□□□□ -1.49
CMTM1-210ENST00000528441 UBE2BP63146 152 aa5.71□□□□□ -1.5
CMTM1-210ENST00000528441 PRR3P79522 188 aaKnown RBP5.71□□□□□ -1.5
CMTM1-210ENST00000528441 PDZD11Q5EBL8 140 aa5.71□□□□□ -1.5
CMTM1-210ENST00000528441 Q6ZRP5 223 aa5.71□□□□□ -1.5
CMTM1-210ENST00000528441 TIMM17AQ99595 171 aa5.71□□□□□ -1.5
CMTM1-210ENST00000528441 SRRM2Q9UQ35 2752 aaKnown RBP5.7□□□□□ -1.5
CMTM1-210ENST00000528441 LINC01549A6NIU2 74 aa5.7□□□□□ -1.5
CMTM1-210ENST00000528441 KRTAP10-4P60372 401 aaPredicted RBP5.7□□□□□ -1.5
CMTM1-210ENST00000528441 RNF151Q2KHN1 245 aa5.7□□□□□ -1.5
CMTM1-210ENST00000528441 C2orf82Q6UX34 121 aa5.7□□□□□ -1.5
CMTM1-210ENST00000528441 PHF5AQ7RTV0 110 aaKnown RBP5.7□□□□□ -1.5
CMTM1-210ENST00000528441 TOMM6Q96B49 74 aa5.7□□□□□ -1.5
CMTM1-210ENST00000528441 C6orf48Q9UBA6 75 aa5.7□□□□□ -1.5
CMTM1-210ENST00000528441 MYCBP2O75592 4640 aa5.7□□□□□ -1.5
CMTM1-210ENST00000528441 TRBV30A0A0K0K1B3 111 aa5.69□□□□□ -1.5
CMTM1-210ENST00000528441 NPSP0C0P6 89 aa5.69□□□□□ -1.5
CMTM1-210ENST00000528441 PMCHL1Q16048 86 aa5.69□□□□□ -1.5
CMTM1-210ENST00000528441 C1orf137Q5JT78 98 aa5.69□□□□□ -1.5
CMTM1-210ENST00000528441 C10orf25Q5T742 122 aa5.69□□□□□ -1.5
CMTM1-210ENST00000528441 REG3GQ6UW15 175 aa5.69□□□□□ -1.5
CMTM1-210ENST00000528441 ERASQ7Z444 233 aa5.69□□□□□ -1.5
CMTM1-210ENST00000528441 FAM104AQ969W3 186 aa5.69□□□□□ -1.5
CMTM1-210ENST00000528441 AMELXQ99217 191 aa5.69□□□□□ -1.5
CMTM1-210ENST00000528441 A0A1W2PNN7 141 aa5.68□□□□□ -1.5
CMTM1-210ENST00000528441 C20orf202A1L168 122 aa5.68□□□□□ -1.5
CMTM1-210ENST00000528441 IGIPA6NJ69 53 aa5.68□□□□□ -1.5
CMTM1-210ENST00000528441 PET117Q6UWS5 81 aa5.68□□□□□ -1.5
CMTM1-210ENST00000528441 LINC00173Q6ZV60 143 aa5.68□□□□□ -1.5
CMTM1-210ENST00000528441 LINC01561Q8N1V8 128 aa5.68□□□□□ -1.5
CMTM1-210ENST00000528441 HSPB8Q9UJY1 196 aa5.68□□□□□ -1.5
CMTM1-210ENST00000528441 H3BRM9 83 aa5.67□□□□□ -1.5
CMTM1-210ENST00000528441 M0QXV9 152 aa5.67□□□□□ -1.5
CMTM1-210ENST00000528441 LEPROTL1O95214 131 aa5.67□□□□□ -1.5
CMTM1-210ENST00000528441 C3orf79P0CE67 100 aa5.67□□□□□ -1.5
CMTM1-210ENST00000528441 SERTAD4-AS1Q5TG53 156 aa5.67□□□□□ -1.5
CMTM1-210ENST00000528441 Q8IZM0 81 aa5.67□□□□□ -1.5
CMTM1-210ENST00000528441 CDKN2A-AS1Q9UH64 79 aa5.67□□□□□ -1.5
CMTM1-210ENST00000528441 FAM168BA1KXE4 195 aa5.66□□□□□ -1.5
CMTM1-210ENST00000528441 NDUFC2-KCTD14E9PQ53 114 aa5.66□□□□□ -1.5
CMTM1-210ENST00000528441 SYS1-DBNDD2H3BUS1 97 aa5.66□□□□□ -1.5
CMTM1-210ENST00000528441 HBDP02042 147 aa5.66□□□□□ -1.5
CMTM1-210ENST00000528441 SPINK8P0C7L1 97 aa5.66□□□□□ -1.5
CMTM1-210ENST00000528441 CXCL5P42830 114 aa5.66□□□□□ -1.5
CMTM1-210ENST00000528441 PMVKQ15126 192 aa5.66□□□□□ -1.5
CMTM1-210ENST00000528441 SPINK6Q6UWN8 80 aa5.66□□□□□ -1.5
CMTM1-210ENST00000528441 FAM19A2Q8N3H0 131 aa5.66□□□□□ -1.5
CMTM1-210ENST00000528441 COX7B2Q8TF08 81 aa5.66□□□□□ -1.5
CMTM1-210ENST00000528441 PLA2G2DQ9UNK4 145 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms