RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 ODF3BA8MYP8 253 aa3.16□□□□□ -1.9
PCF11-202ENST00000528336 HMGN3Q15651 99 aa3.16□□□□□ -1.9
PCF11-202ENST00000528336 KRTAP25-1Q3LHN0 102 aa3.16□□□□□ -1.9
PCF11-202ENST00000528336 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
PCF11-202ENST00000528336 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
PCF11-202ENST00000528336 BRD3OSQ6XYD6 125 aa3.16□□□□□ -1.9
PCF11-202ENST00000528336 DOCK11Q5JSL3 2073 aa3.16□□□□□ -1.9
PCF11-202ENST00000528336 ZFHX3Q15911 3703 aa3.15□□□□□ -1.9
PCF11-202ENST00000528336 IGHV3-64A0A075B6Q5 118 aa3.15□□□□□ -1.91
PCF11-202ENST00000528336 A0A087WSZ3 146 aa3.15□□□□□ -1.91
PCF11-202ENST00000528336 IGHV1-24A0A0C4DH33 117 aa3.15□□□□□ -1.91
PCF11-202ENST00000528336 PRB3Q04118 309 aaPredicted RBP3.15□□□□□ -1.91
PCF11-202ENST00000528336 DEFB112Q30KQ8 113 aa3.15□□□□□ -1.91
PCF11-202ENST00000528336 C1orf134Q5TEV5 83 aa3.15□□□□□ -1.91
PCF11-202ENST00000528336 MINOS1Q5TGZ0 78 aa3.15□□□□□ -1.91
PCF11-202ENST00000528336 LINC00269Q8N2A0 174 aa3.15□□□□□ -1.91
PCF11-202ENST00000528336 LEAP2Q969E1 77 aa3.15□□□□□ -1.91
PCF11-202ENST00000528336 C20orf166-AS1Q96NR2 134 aa3.15□□□□□ -1.91
PCF11-202ENST00000528336 VAMP8Q9BV40 100 aa3.15□□□□□ -1.91
PCF11-202ENST00000528336 C14orf132Q9NPU4 83 aa3.15□□□□□ -1.91
PCF11-202ENST00000528336 MUC4Q99102 2169 aa3.15□□□□□ -1.91
PCF11-202ENST00000528336 TRBV6-7A0A0A0MS04 114 aa3.14□□□□□ -1.91
PCF11-202ENST00000528336 TRAV14DV4A0A0A6YYC5 116 aa3.14□□□□□ -1.91
PCF11-202ENST00000528336 H3BQ15 152 aa3.14□□□□□ -1.91
PCF11-202ENST00000528336 ZNF137PP52743 207 aa3.14□□□□□ -1.91
PCF11-202ENST00000528336 NPC2P61916 151 aa3.14□□□□□ -1.91
PCF11-202ENST00000528336 Q0VG73 95 aa3.14□□□□□ -1.91
PCF11-202ENST00000528336 FAM19A2Q8N3H0 131 aa3.14□□□□□ -1.91
PCF11-202ENST00000528336 MED9Q9NWA0 146 aa3.14□□□□□ -1.91
PCF11-202ENST00000528336 KIAA2026Q5HYC2 2103 aa3.14□□□□□ -1.91
PCF11-202ENST00000528336 TRAV3A0A0B4J244 114 aa3.13□□□□□ -1.91
PCF11-202ENST00000528336 FAM24AA6NFZ4 105 aa3.13□□□□□ -1.91
PCF11-202ENST00000528336 IGKV1-17P01599 117 aa3.13□□□□□ -1.91
PCF11-202ENST00000528336 MT-ATP8P03928 68 aa3.13□□□□□ -1.91
PCF11-202ENST00000528336 SSBP1Q04837 148 aaKnown RBP3.13□□□□□ -1.91
PCF11-202ENST00000528336 LINC00299Q6ZSB3 139 aa3.13□□□□□ -1.91
PCF11-202ENST00000528336 ZNF833PQ6ZTB9 187 aa3.13□□□□□ -1.91
PCF11-202ENST00000528336 SBSPONQ8IVN8 264 aa3.13□□□□□ -1.91
PCF11-202ENST00000528336 SMIM4Q8WVI0 70 aa3.13□□□□□ -1.91
PCF11-202ENST00000528336 DSCR8Q96T75 97 aa3.13□□□□□ -1.91
PCF11-202ENST00000528336 TMEM242Q9NWH2 141 aa3.13□□□□□ -1.91
PCF11-202ENST00000528336 HILPDAQ9Y5L2 63 aa3.13□□□□□ -1.91
PCF11-202ENST00000528336 V9GYH0 126 aa3.13□□□□□ -1.91
PCF11-202ENST00000528336 COL6A5A8TX70 2615 aa3.12□□□□□ -1.91
PCF11-202ENST00000528336 IGLV10-54A0A075B6I4 117 aa3.12□□□□□ -1.91
PCF11-202ENST00000528336 ZNF705FA8MVS1 300 aaPredicted RBP3.12□□□□□ -1.91
PCF11-202ENST00000528336 E7EUB6 86 aa3.12□□□□□ -1.91
PCF11-202ENST00000528336 H3BUX3 64 aa3.12□□□□□ -1.91
PCF11-202ENST00000528336 NDUFB6O95139 128 aa3.12□□□□□ -1.91
PCF11-202ENST00000528336 BAALC-AS2P0C853 105 aa3.12□□□□□ -1.91
PCF11-202ENST00000528336 SAA2P0DJI9 122 aaPredicted RBP3.12□□□□□ -1.91
PCF11-202ENST00000528336 MIFP14174 115 aa3.12□□□□□ -1.91
PCF11-202ENST00000528336 SPANXN5Q5MJ07 72 aa3.12□□□□□ -1.91
PCF11-202ENST00000528336 SPINT4Q6UDR6 99 aa3.12□□□□□ -1.91
PCF11-202ENST00000528336 Q8N8P6 123 aa3.12□□□□□ -1.91
PCF11-202ENST00000528336 DPH3P1Q9H4G8 78 aa3.12□□□□□ -1.91
PCF11-202ENST00000528336 STAB1Q9NY15 2570 aa3.11□□□□□ -1.91
PCF11-202ENST00000528336 SSSCA1O60232 199 aa3.11□□□□□ -1.91
PCF11-202ENST00000528336 PPYP01298 95 aa3.11□□□□□ -1.91
PCF11-202ENST00000528336 CRPP02741 224 aa3.11□□□□□ -1.91
PCF11-202ENST00000528336 IL7P13232 177 aa3.11□□□□□ -1.91
PCF11-202ENST00000528336 COX7CP15954 63 aa3.11□□□□□ -1.91
PCF11-202ENST00000528336 ZNF345Q14585 488 aa3.11□□□□□ -1.91
PCF11-202ENST00000528336 KRTAP21-3Q3LHN1 58 aa3.11□□□□□ -1.91
PCF11-202ENST00000528336 PYDC2Q56P42 97 aa3.11□□□□□ -1.91
PCF11-202ENST00000528336 RPL39P5Q59GN2 51 aa3.11□□□□□ -1.91
PCF11-202ENST00000528336 LYPD1Q8N2G4 141 aa3.11□□□□□ -1.91
PCF11-202ENST00000528336 Q8N6K4 173 aa3.11□□□□□ -1.91
PCF11-202ENST00000528336 TSKUQ8WUA8 353 aa3.11□□□□□ -1.91
PCF11-202ENST00000528336 FBN1P35555 2871 aaKnown RBP3.1□□□□□ -1.91
PCF11-202ENST00000528336 IL5P05113 134 aa3.1□□□□□ -1.91
PCF11-202ENST00000528336 MGST1P10620 155 aaKnown RBP3.1□□□□□ -1.91
PCF11-202ENST00000528336 FXYD4P59646 89 aa3.1□□□□□ -1.91
PCF11-202ENST00000528336 IQCJQ1A5X6 159 aa3.1□□□□□ -1.91
PCF11-202ENST00000528336 TMEM136Q6ZRR5 245 aa3.1□□□□□ -1.91
PCF11-202ENST00000528336 S100ZQ8WXG8 99 aa3.1□□□□□ -1.91
PCF11-202ENST00000528336 FXYD6Q9H0Q3 95 aa3.1□□□□□ -1.91
PCF11-202ENST00000528336 NPVFQ9HCQ7 196 aa3.1□□□□□ -1.91
PCF11-202ENST00000528336 CUBNO60494 3623 aa3.1□□□□□ -1.91
PCF11-202ENST00000528336 A0A0J9YX75 114 aa3.09□□□□□ -1.91
PCF11-202ENST00000528336 RBAKDNA6NC62 111 aa3.09□□□□□ -1.91
PCF11-202ENST00000528336 G3V3Q6 166 aa3.09□□□□□ -1.91
PCF11-202ENST00000528336 FAUP35544 74 aaKnown RBP3.09□□□□□ -1.91
PCF11-202ENST00000528336 ZNF818PQ6ZRF7 136 aa3.09□□□□□ -1.91
PCF11-202ENST00000528336 C5orf38Q86SI9 138 aa3.09□□□□□ -1.91
PCF11-202ENST00000528336 TOMM5Q8N4H5 51 aa3.09□□□□□ -1.91
PCF11-202ENST00000528336 C5orf56Q8N8D9 126 aa3.09□□□□□ -1.91
PCF11-202ENST00000528336 SMIM7Q9BQ49 75 aa3.09□□□□□ -1.91
PCF11-202ENST00000528336 TRAV2A0A0B4J234 112 aa3.08□□□□□ -1.92
PCF11-202ENST00000528336 CLPSL1A2RUU4 121 aa3.08□□□□□ -1.92
PCF11-202ENST00000528336 NAP1L6A6NFF2 107 aa3.08□□□□□ -1.92
PCF11-202ENST00000528336 PSCAO43653 123 aa3.08□□□□□ -1.92
PCF11-202ENST00000528336 NDUFA3O95167 84 aa3.08□□□□□ -1.92
PCF11-202ENST00000528336 ATP5EP56381 51 aaPredicted RBP3.08□□□□□ -1.92
PCF11-202ENST00000528336 HIGD2AQ9BW72 106 aa3.08□□□□□ -1.92
PCF11-202ENST00000528336 BET1LQ9NYM9 111 aa3.08□□□□□ -1.92
PCF11-202ENST00000528336 PSORS1C2Q9UIG4 136 aa3.08□□□□□ -1.92
PCF11-202ENST00000528336 R4GN34 69 aa3.08□□□□□ -1.92
PCF11-202ENST00000528336 TENM1Q9UKZ4 2725 aa3.08□□□□□ -1.92
PCF11-202ENST00000528336 TRAV1-1A0A0B4J248 108 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 324.7 ms