RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 LINC00469Q8N7U9 141 aa11.38□□□□□ -0.59
CAPN1-206ENST00000526966 KIR2DL4Q99706 377 aa11.38□□□□□ -0.59
CAPN1-206ENST00000526966 C20orf78Q9BR46 151 aa11.38□□□□□ -0.59
CAPN1-206ENST00000526966 LAMTOR2Q9Y2Q5 125 aa11.38□□□□□ -0.59
CAPN1-206ENST00000526966 TNFRSF6BO95407 300 aa11.37□□□□□ -0.59
CAPN1-206ENST00000526966 IGLV7-43P04211 117 aa11.37□□□□□ -0.59
CAPN1-206ENST00000526966 PMCHL1Q16048 86 aa11.37□□□□□ -0.59
CAPN1-206ENST00000526966 PRR26Q8N8Z3 221 aa11.37□□□□□ -0.59
CAPN1-206ENST00000526966 C18orf32Q8TCD1 76 aa11.37□□□□□ -0.59
CAPN1-206ENST00000526966 DIRC1Q969H9 104 aa11.37□□□□□ -0.59
CAPN1-206ENST00000526966 CHCHD1Q96BP2 118 aaKnown RBP11.37□□□□□ -0.59
CAPN1-206ENST00000526966 PRELID3AQ96N28 172 aa11.37□□□□□ -0.59
CAPN1-206ENST00000526966 ALKBH7Q9BT30 221 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-206ENST00000526966 VAMP8Q9BV40 100 aa11.37□□□□□ -0.59
CAPN1-206ENST00000526966 MRPL35Q9NZE8 188 aaKnown RBP11.37□□□□□ -0.59
CAPN1-206ENST00000526966 M0R143 59 aa11.36□□□□□ -0.59
CAPN1-206ENST00000526966 NPYP01303 97 aa11.36□□□□□ -0.59
CAPN1-206ENST00000526966 RPL32P62910 135 aaKnown RBP11.36□□□□□ -0.59
CAPN1-206ENST00000526966 MIEN1Q9BRT3 115 aa11.36□□□□□ -0.59
CAPN1-206ENST00000526966 PRSS47A8MTI9 375 aa11.35□□□□□ -0.59
CAPN1-206ENST00000526966 F8WDY8 70 aa11.35□□□□□ -0.59
CAPN1-206ENST00000526966 KIAA1644Q3SXP7 199 aa11.35□□□□□ -0.59
CAPN1-206ENST00000526966 KRTAP11-1Q8IUC1 163 aa11.35□□□□□ -0.59
CAPN1-206ENST00000526966 H0Y9J4 135 aa11.34□□□□□ -0.59
CAPN1-206ENST00000526966 FAM104AQ969W3 186 aa11.34□□□□□ -0.59
CAPN1-206ENST00000526966 IGHV3OR16-9A0A0B4J2B5 98 aa11.33□□□□□ -0.6
CAPN1-206ENST00000526966 HSBP1O75506 76 aa11.33□□□□□ -0.6
CAPN1-206ENST00000526966 TLX1NBP0CAT3 122 aa11.33□□□□□ -0.6
CAPN1-206ENST00000526966 ORAOV1Q8WV07 137 aa11.33□□□□□ -0.6
CAPN1-206ENST00000526966 FAM168BA1KXE4 195 aa11.32□□□□□ -0.6
CAPN1-206ENST00000526966 A0A087WZ39 114 aa11.31□□□□□ -0.6
CAPN1-206ENST00000526966 NDUFA1O15239 70 aa11.31□□□□□ -0.6
CAPN1-206ENST00000526966 KRTAP1-4P0C5Y4 121 aa11.31□□□□□ -0.6
CAPN1-206ENST00000526966 KRTDAPP60985 99 aa11.31□□□□□ -0.6
CAPN1-206ENST00000526966 C10orf25Q5T742 122 aa11.31□□□□□ -0.6
CAPN1-206ENST00000526966 SMIM2Q9BVW6 85 aa11.31□□□□□ -0.6
CAPN1-206ENST00000526966 MUC2Q02817 5179 aa11.3□□□□□ -0.6
CAPN1-206ENST00000526966 IGLV1-50A0A075B6I6 118 aa11.3□□□□□ -0.6
CAPN1-206ENST00000526966 RPL39P62891 51 aaKnown RBP11.3□□□□□ -0.6
CAPN1-206ENST00000526966 MAP1LC3AQ9H492 121 aa11.3□□□□□ -0.6
CAPN1-206ENST00000526966 C6orf48Q9UBA6 75 aa11.3□□□□□ -0.6
CAPN1-206ENST00000526966 TCAPO15273 167 aa11.29□□□□□ -0.6
CAPN1-206ENST00000526966 C3orf79P0CE67 100 aa11.29□□□□□ -0.6
CAPN1-206ENST00000526966 UQCR10Q9UDW1 63 aa11.29□□□□□ -0.6
CAPN1-206ENST00000526966 MRPS36P82909 103 aaKnown RBP11.28□□□□□ -0.6
CAPN1-206ENST00000526966 UNQ6190/PRO20217Q6UXQ8 127 aa11.28□□□□□ -0.6
CAPN1-206ENST00000526966 FAM19A5Q7Z5A7 132 aaPredicted RBP11.28□□□□□ -0.6
CAPN1-206ENST00000526966 KRTAP7-1Q8IUC3 87 aa11.28□□□□□ -0.6
CAPN1-206ENST00000526966 SPANXA1Q9NS26 97 aa11.28□□□□□ -0.6
CAPN1-206ENST00000526966 LOC389332A0A1B0GUA5 103 aa11.27□□□□□ -0.61
CAPN1-206ENST00000526966 Q8N8P6 123 aa11.27□□□□□ -0.61
CAPN1-206ENST00000526966 NXT2Q9NPJ8 142 aaKnown RBP11.27□□□□□ -0.61
CAPN1-206ENST00000526966 SNHG12Q9BXW3 62 aa11.26□□□□□ -0.61
CAPN1-206ENST00000526966 PAM16Q9Y3D7 125 aa11.26□□□□□ -0.61
CAPN1-206ENST00000526966 A0A1B0GV90 55 aa11.25□□□□□ -0.61
CAPN1-206ENST00000526966 K7EMI3 77 aa11.25□□□□□ -0.61
CAPN1-206ENST00000526966 KIAA0087Q14695 138 aa11.25□□□□□ -0.61
CAPN1-206ENST00000526966 SPATA45Q537H7 98 aa11.25□□□□□ -0.61
CAPN1-206ENST00000526966 HSPB8Q9UJY1 196 aa11.25□□□□□ -0.61
CAPN1-206ENST00000526966 M0QXV9 152 aa11.24□□□□□ -0.61
CAPN1-206ENST00000526966 LINC00614P0C842 121 aa11.24□□□□□ -0.61
CAPN1-206ENST00000526966 IFI27P40305 119 aaPredicted RBP11.24□□□□□ -0.61
CAPN1-206ENST00000526966 GAGE2EQ4V326 116 aa11.24□□□□□ -0.61
CAPN1-206ENST00000526966 GAGE2DQ9UEU5 116 aa11.24□□□□□ -0.61
CAPN1-206ENST00000526966 IGLC3P0DOY3 106 aa11.23□□□□□ -0.61
CAPN1-206ENST00000526966 PET117Q6UWS5 81 aa11.23□□□□□ -0.61
CAPN1-206ENST00000526966 LINC01546A6NGU7 62 aa11.22□□□□□ -0.61
CAPN1-206ENST00000526966 FAM19A2Q8N3H0 131 aa11.22□□□□□ -0.61
CAPN1-206ENST00000526966 TRBV30A0A0K0K1B3 111 aa11.21□□□□□ -0.61
CAPN1-206ENST00000526966 LEPROTL1O95214 131 aa11.21□□□□□ -0.61
CAPN1-206ENST00000526966 RPL13AP40429 203 aaKnown RBP11.21□□□□□ -0.61
CAPN1-206ENST00000526966 UBE2D1P51668 147 aa11.21□□□□□ -0.61
CAPN1-206ENST00000526966 UBE2BP63146 152 aa11.21□□□□□ -0.61
CAPN1-206ENST00000526966 URB1-AS1Q96HZ7 61 aa11.21□□□□□ -0.61
CAPN1-206ENST00000526966 ORMDL2Q53FV1 153 aa11.2□□□□□ -0.62
CAPN1-206ENST00000526966 COL5A1-AS1Q5SY13 56 aa11.2□□□□□ -0.62
CAPN1-206ENST00000526966 NDUFC2-KCTD14E9PQ53 114 aa11.19□□□□□ -0.62
CAPN1-206ENST00000526966 PRR4Q16378 134 aa11.19□□□□□ -0.62
CAPN1-206ENST00000526966 C9orf129Q5T035 196 aaKnown RBP11.19□□□□□ -0.62
CAPN1-206ENST00000526966 LINC00242Q5T6M2 205 aa11.19□□□□□ -0.62
CAPN1-206ENST00000526966 MAP1LC3CQ9BXW4 147 aa11.19□□□□□ -0.62
CAPN1-206ENST00000526966 SYS1-DBNDD2H3BUS1 97 aa11.18□□□□□ -0.62
CAPN1-206ENST00000526966 FA2HQ7L5A8 372 aa11.18□□□□□ -0.62
CAPN1-206ENST00000526966 PYGO1Q9Y3Y4 419 aa11.18□□□□□ -0.62
CAPN1-206ENST00000526966 HSBP1L1C9JCN9 74 aa11.17□□□□□ -0.62
CAPN1-206ENST00000526966 G0S2P27469 103 aa11.17□□□□□ -0.62
CAPN1-206ENST00000526966 C2orf82Q6UX34 121 aa11.17□□□□□ -0.62
CAPN1-206ENST00000526966 IGLV4-3A0A075B6K6 122 aa11.16□□□□□ -0.62
CAPN1-206ENST00000526966 Q6ZN92 141 aa11.16□□□□□ -0.62
CAPN1-206ENST00000526966 LINC01561Q8N1V8 128 aa11.15□□□□□ -0.62
CAPN1-206ENST00000526966 PMCHL2Q9BQD1 86 aa11.15□□□□□ -0.62
CAPN1-206ENST00000526966 ZNF861PO60384 105 aa11.14□□□□□ -0.63
CAPN1-206ENST00000526966 LINC01545Q5VT33 79 aa11.14□□□□□ -0.63
CAPN1-206ENST00000526966 C2orf66Q6UXQ4 117 aa11.14□□□□□ -0.63
CAPN1-206ENST00000526966 TMEM141Q96I45 108 aa11.14□□□□□ -0.63
CAPN1-206ENST00000526966 CYSLTR1Q9Y271 337 aa11.14□□□□□ -0.63
CAPN1-206ENST00000526966 LINC01549A6NIU2 74 aa11.13□□□□□ -0.63
CAPN1-206ENST00000526966 TOMM6Q96B49 74 aa11.13□□□□□ -0.63
CAPN1-206ENST00000526966 A0A096LNJ9 63 aa11.1□□□□□ -0.63
CAPN1-206ENST00000526966 A0A0U1RQV1 116 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms