RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 IFITM1P13164 125 aa13.69□□□□□ -0.22
SMCO4-203ENST00000526869 SPAG11BQ08648 103 aa13.69□□□□□ -0.22
SMCO4-203ENST00000526869 CKS1BP61024 79 aa13.68□□□□□ -0.22
SMCO4-203ENST00000526869 MEIG1Q5JSS6 88 aa13.68□□□□□ -0.22
SMCO4-203ENST00000526869 ADAMTSL4-AS1Q5T5F5 129 aa13.68□□□□□ -0.22
SMCO4-203ENST00000526869 MUC7Q8TAX7 377 aa13.68□□□□□ -0.22
SMCO4-203ENST00000526869 PPDPFQ9H3Y8 114 aa13.68□□□□□ -0.22
SMCO4-203ENST00000526869 COPS9Q8WXC6 57 aa13.67□□□□□ -0.22
SMCO4-203ENST00000526869 Q9HAA7 133 aa13.67□□□□□ -0.22
SMCO4-203ENST00000526869 COX11Q9Y6N1 276 aa13.67□□□□□ -0.22
SMCO4-203ENST00000526869 CSMD3Q7Z407 3707 aa13.66□□□□□ -0.22
SMCO4-203ENST00000526869 A0A1B0GWB2 263 aa13.66□□□□□ -0.22
SMCO4-203ENST00000526869 RPL24P83731 157 aaKnown RBP13.66□□□□□ -0.22
SMCO4-203ENST00000526869 TTC32Q5I0X7 151 aa13.65□□□□□ -0.22
SMCO4-203ENST00000526869 F8WDY8 70 aa13.64□□□□□ -0.23
SMCO4-203ENST00000526869 SMIM13P0DJ93 91 aa13.64□□□□□ -0.23
SMCO4-203ENST00000526869 MUSTN1Q8IVN3 82 aa13.64□□□□□ -0.23
SMCO4-203ENST00000526869 WWC2-AS2Q96NR7 200 aa13.64□□□□□ -0.23
SMCO4-203ENST00000526869 PLECQ15149 4684 aaKnown RBP13.63□□□□□ -0.23
SMCO4-203ENST00000526869 C2orf82Q6UX34 121 aa13.63□□□□□ -0.23
SMCO4-203ENST00000526869 C15orf56Q8N910 161 aa13.63□□□□□ -0.23
SMCO4-203ENST00000526869 NTN5Q8WTR8 489 aaPredicted RBP13.63□□□□□ -0.23
SMCO4-203ENST00000526869 NHP2Q9NX24 153 aaKnown RBP13.63□□□□□ -0.23
SMCO4-203ENST00000526869 ERG28Q9UKR5 140 aa13.63□□□□□ -0.23
SMCO4-203ENST00000526869 DNAH1Q9P2D7 4330 aa13.61□□□□□ -0.23
SMCO4-203ENST00000526869 GVQW2A0A096LPI5 108 aaPredicted RBP13.61□□□□□ -0.23
SMCO4-203ENST00000526869 TAX1BP3O14907 124 aa13.61□□□□□ -0.23
SMCO4-203ENST00000526869 COX17Q14061 63 aa13.61□□□□□ -0.23
SMCO4-203ENST00000526869 C2orf48Q96LS8 159 aa13.61□□□□□ -0.23
SMCO4-203ENST00000526869 KRTAP1-5Q9BYS1 174 aa13.61□□□□□ -0.23
SMCO4-203ENST00000526869 TENM2Q9NT68 2774 aa13.6□□□□□ -0.23
SMCO4-203ENST00000526869 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.6□□□□□ -0.23
SMCO4-203ENST00000526869 LINC00308Q8TCZ7 52 aa13.6□□□□□ -0.23
SMCO4-203ENST00000526869 VPS13DQ5THJ4 4388 aa13.6□□□□□ -0.23
SMCO4-203ENST00000526869 A4D1N5 150 aa13.59□□□□□ -0.23
SMCO4-203ENST00000526869 ZNF561-AS1K7EIQ3 104 aa13.59□□□□□ -0.23
SMCO4-203ENST00000526869 LINC00158P58513 81 aa13.59□□□□□ -0.23
SMCO4-203ENST00000526869 STARD9Q9P2P6 4700 aa13.58□□□□□ -0.23
SMCO4-203ENST00000526869 NBDYA0A0U1RRE5 68 aa13.58□□□□□ -0.24
SMCO4-203ENST00000526869 C6orf223Q8N319 242 aa13.58□□□□□ -0.24
SMCO4-203ENST00000526869 MIR7-3HGQ8N6C7 128 aa13.58□□□□□ -0.24
SMCO4-203ENST00000526869 DAND5Q8N907 189 aa13.58□□□□□ -0.24
SMCO4-203ENST00000526869 A0A0U1RRA0 63 aa13.57□□□□□ -0.24
SMCO4-203ENST00000526869 A0A0B4J2C4 111 aa13.56□□□□□ -0.24
SMCO4-203ENST00000526869 TRBV30A0A0K0K1B3 111 aa13.56□□□□□ -0.24
SMCO4-203ENST00000526869 K7ERJ3 54 aa13.56□□□□□ -0.24
SMCO4-203ENST00000526869 UNQ6190/PRO20217Q6UXQ8 127 aa13.56□□□□□ -0.24
SMCO4-203ENST00000526869 TGP01266 2768 aa13.55□□□□□ -0.24
SMCO4-203ENST00000526869 CFC1BP0CG36 223 aa13.55□□□□□ -0.24
SMCO4-203ENST00000526869 CFC1P0CG37 223 aa13.55□□□□□ -0.24
SMCO4-203ENST00000526869 PFN2P35080 140 aa13.55□□□□□ -0.24
SMCO4-203ENST00000526869 HIGD2BQ4VC39 106 aa13.55□□□□□ -0.24
SMCO4-203ENST00000526869 C10orf25Q5T742 122 aa13.55□□□□□ -0.24
SMCO4-203ENST00000526869 SOSTDC1Q6X4U4 206 aa13.54□□□□□ -0.24
SMCO4-203ENST00000526869 LINC00526Q96FQ7 95 aa13.54□□□□□ -0.24
SMCO4-203ENST00000526869 CAMK2N2Q96S95 79 aa13.54□□□□□ -0.24
SMCO4-203ENST00000526869 A0A1B0GV90 55 aa13.53□□□□□ -0.24
SMCO4-203ENST00000526869 C9orf118A6NHY6 69 aa13.53□□□□□ -0.24
SMCO4-203ENST00000526869 USP17L23D6RBM5 183 aa13.53□□□□□ -0.24
SMCO4-203ENST00000526869 NPC2P61916 151 aa13.53□□□□□ -0.24
SMCO4-203ENST00000526869 LOC107984156A0A0G2JMH3 177 aa13.52□□□□□ -0.25
SMCO4-203ENST00000526869 EIF4EBP3O60516 100 aaPredicted RBP13.52□□□□□ -0.25
SMCO4-203ENST00000526869 ARL17AQ8IVW1 177 aa13.52□□□□□ -0.25
SMCO4-203ENST00000526869 C6orf48Q9UBA6 75 aa13.52□□□□□ -0.25
SMCO4-203ENST00000526869 CASC10Q5T4H9 136 aa13.51□□□□□ -0.25
SMCO4-203ENST00000526869 RAB37Q96AX2 223 aa13.51□□□□□ -0.25
SMCO4-203ENST00000526869 PRO1854Q9UHT4 67 aa13.51□□□□□ -0.25
SMCO4-203ENST00000526869 C3orf84H3BNL1 204 aa13.5□□□□□ -0.25
SMCO4-203ENST00000526869 C9orf116Q5BN46 136 aaPredicted RBP13.49□□□□□ -0.25
SMCO4-203ENST00000526869 Q6ZRU5 148 aa13.49□□□□□ -0.25
SMCO4-203ENST00000526869 SYCNQ0VAF6 134 aa13.48□□□□□ -0.25
SMCO4-203ENST00000526869 RNF151Q2KHN1 245 aa13.48□□□□□ -0.25
SMCO4-203ENST00000526869 SND1-IT1Q9HBX3 110 aa13.47□□□□□ -0.25
SMCO4-203ENST00000526869 PSCAO43653 123 aa13.46□□□□□ -0.25
SMCO4-203ENST00000526869 PGPEP1Q9NXJ5 209 aa13.46□□□□□ -0.25
SMCO4-203ENST00000526869 LYSTQ99698 3801 aa13.45□□□□□ -0.26
SMCO4-203ENST00000526869 H3BUT2 72 aa13.45□□□□□ -0.26
SMCO4-203ENST00000526869 CARD19Q96LW7 228 aa13.45□□□□□ -0.26
SMCO4-203ENST00000526869 C14orf177Q52M58 125 aa13.44□□□□□ -0.26
SMCO4-203ENST00000526869 A0A1W2PPM0 123 aa13.43□□□□□ -0.26
SMCO4-203ENST00000526869 NDUFC2O95298 119 aa13.43□□□□□ -0.26
SMCO4-203ENST00000526869 TSPAN13O95857 204 aa13.43□□□□□ -0.26
SMCO4-203ENST00000526869 Q6ZR54 194 aa13.43□□□□□ -0.26
SMCO4-203ENST00000526869 Q6ZRN7 208 aaPredicted RBP13.43□□□□□ -0.26
SMCO4-203ENST00000526869 NDUFC2-KCTD14E9PQ53 114 aa13.41□□□□□ -0.26
SMCO4-203ENST00000526869 LINC00476Q8WZB0 136 aa13.41□□□□□ -0.26
SMCO4-203ENST00000526869 ALMS1Q8TCU4 4167 aa13.4□□□□□ -0.26
SMCO4-203ENST00000526869 TRAV13-2A0A0B4J235 113 aa13.4□□□□□ -0.26
SMCO4-203ENST00000526869 TLX1NBP0CAT3 122 aa13.4□□□□□ -0.26
SMCO4-203ENST00000526869 LECT2O14960 151 aa13.39□□□□□ -0.27
SMCO4-203ENST00000526869 SLPIP03973 132 aa13.39□□□□□ -0.27
SMCO4-203ENST00000526869 FABP2P12104 132 aa13.39□□□□□ -0.27
SMCO4-203ENST00000526869 NAA38Q9BRA0 125 aaKnown RBP13.39□□□□□ -0.27
SMCO4-203ENST00000526869 DNAH6Q9C0G6 4158 aa13.38□□□□□ -0.27
SMCO4-203ENST00000526869 IGKV2-28A0A075B6P5 120 aa13.38□□□□□ -0.27
SMCO4-203ENST00000526869 IGKV2D-28P01615 120 aa13.38□□□□□ -0.27
SMCO4-203ENST00000526869 RPL13AP40429 203 aaKnown RBP13.38□□□□□ -0.27
SMCO4-203ENST00000526869 CNBPP62633 177 aaKnown RBP13.38□□□□□ -0.27
SMCO4-203ENST00000526869 WFDC2Q14508 124 aa13.38□□□□□ -0.27
SMCO4-203ENST00000526869 VAMP3Q15836 100 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms