RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 TIMM17AQ99595 171 aa7.99□□□□□ -1.13
VPS11-202ENST00000526829 ZFAND3Q9H8U3 227 aa7.99□□□□□ -1.13
VPS11-202ENST00000526829 H7BZZ5 65 aa7.98□□□□□ -1.13
VPS11-202ENST00000526829 EIF4EBP3O60516 100 aaPredicted RBP7.98□□□□□ -1.13
VPS11-202ENST00000526829 GPHB5Q86YW7 130 aa7.98□□□□□ -1.13
VPS11-202ENST00000526829 LEPROTO15243 131 aa7.97□□□□□ -1.13
VPS11-202ENST00000526829 LYPD5Q6UWN5 251 aa7.97□□□□□ -1.13
VPS11-202ENST00000526829 KLK9Q2XQG4 91 aa7.97□□□□□ -1.13
VPS11-202ENST00000526829 ZNF876PQ49A33 203 aa7.97□□□□□ -1.13
VPS11-202ENST00000526829 KLK9Q9UKQ9 250 aa7.97□□□□□ -1.13
VPS11-202ENST00000526829 A0A0J9YX75 114 aa7.96□□□□□ -1.14
VPS11-202ENST00000526829 IBA57-AS1B1ANH7 110 aa7.96□□□□□ -1.14
VPS11-202ENST00000526829 TRBV12-3P01733 135 aa7.96□□□□□ -1.14
VPS11-202ENST00000526829 MGPP08493 103 aa7.96□□□□□ -1.14
VPS11-202ENST00000526829 XCL1P47992 114 aa7.96□□□□□ -1.14
VPS11-202ENST00000526829 C14orf178Q8N769 122 aaPredicted RBP7.96□□□□□ -1.14
VPS11-202ENST00000526829 XCL2Q9UBD3 114 aa7.96□□□□□ -1.14
VPS11-202ENST00000526829 PLECQ15149 4684 aaKnown RBP7.96□□□□□ -1.14
VPS11-202ENST00000526829 TRAV21A0A0B4J279 112 aa7.95□□□□□ -1.14
VPS11-202ENST00000526829 MUSTN1Q8IVN3 82 aa7.95□□□□□ -1.14
VPS11-202ENST00000526829 PHLDA3Q9Y5J5 127 aa7.95□□□□□ -1.14
VPS11-202ENST00000526829 SDHAF1A6NFY7 115 aa7.95□□□□□ -1.14
VPS11-202ENST00000526829 S100A4P26447 101 aaKnown RBP7.95□□□□□ -1.14
VPS11-202ENST00000526829 POLR2KP53803 58 aaKnown RBP7.95□□□□□ -1.14
VPS11-202ENST00000526829 Q1RN00 199 aa7.95□□□□□ -1.14
VPS11-202ENST00000526829 PRR9Q5T870 116 aa7.95□□□□□ -1.14
VPS11-202ENST00000526829 HYDINQ4G0P3 5121 aa7.95□□□□□ -1.14
VPS11-202ENST00000526829 IGHV3OR16-8A0A075B7F1 116 aa7.94□□□□□ -1.14
VPS11-202ENST00000526829 TMEM223A0PJW6 202 aa7.94□□□□□ -1.14
VPS11-202ENST00000526829 RBMY1BA6NDE4 496 aaKnown RBP7.94□□□□□ -1.14
VPS11-202ENST00000526829 RBMY1EA6NEQ0 496 aaKnown RBP7.94□□□□□ -1.14
VPS11-202ENST00000526829 RBMY1DP0C7P1 496 aaKnown RBP7.94□□□□□ -1.14
VPS11-202ENST00000526829 RBMY1A1P0DJD3 496 aaKnown RBP7.94□□□□□ -1.14
VPS11-202ENST00000526829 RBMY1CP0DJD4 496 aa7.94□□□□□ -1.14
VPS11-202ENST00000526829 CIRBPQ14011 172 aaKnown RBP7.94□□□□□ -1.14
VPS11-202ENST00000526829 RBMY1FQ15415 496 aaKnown RBP7.94□□□□□ -1.14
VPS11-202ENST00000526829 C15orf32Q32M92 178 aa7.94□□□□□ -1.14
VPS11-202ENST00000526829 VSIG2Q96IQ7 327 aa7.94□□□□□ -1.14
VPS11-202ENST00000526829 H7C2G1 150 aa7.93□□□□□ -1.14
VPS11-202ENST00000526829 H7C423 109 aa7.93□□□□□ -1.14
VPS11-202ENST00000526829 UBE2L6O14933 153 aa7.93□□□□□ -1.14
VPS11-202ENST00000526829 ZNF73O43830 326 aaPredicted RBP7.93□□□□□ -1.14
VPS11-202ENST00000526829 NXPH4O95158 308 aa7.93□□□□□ -1.14
VPS11-202ENST00000526829 DEFB114Q30KQ6 69 aa7.93□□□□□ -1.14
VPS11-202ENST00000526829 ALMS1Q8TCU4 4167 aa7.93□□□□□ -1.14
VPS11-202ENST00000526829 IGHV3-35A0A0C4DH35 117 aa7.93□□□□□ -1.14
VPS11-202ENST00000526829 TRIAP1O43715 76 aa7.93□□□□□ -1.14
VPS11-202ENST00000526829 BCE1O60756 84 aa7.93□□□□□ -1.14
VPS11-202ENST00000526829 RBM3P98179 157 aaKnown RBP7.93□□□□□ -1.14
VPS11-202ENST00000526829 ZFAND2AQ8N6M9 145 aa7.93□□□□□ -1.14
VPS11-202ENST00000526829 DAND5Q8N907 189 aa7.93□□□□□ -1.14
VPS11-202ENST00000526829 LINC00588Q9Y4M8 146 aa7.93□□□□□ -1.14
VPS11-202ENST00000526829 NDUFC1O43677 76 aa7.92□□□□□ -1.14
VPS11-202ENST00000526829 FAM222AQ5U5X8 452 aa7.92□□□□□ -1.14
VPS11-202ENST00000526829 Q6JHZ5 121 aa7.92□□□□□ -1.14
VPS11-202ENST00000526829 KIF25-AS1Q9Y6Z4 181 aa7.92□□□□□ -1.14
VPS11-202ENST00000526829 IGHV3-66A0A0C4DH42 116 aa7.91□□□□□ -1.14
VPS11-202ENST00000526829 LINC00315P59091 139 aa7.91□□□□□ -1.14
VPS11-202ENST00000526829 CLEC19AQ6UXS0 136 aa7.91□□□□□ -1.14
VPS11-202ENST00000526829 F6UB75 175 aa7.91□□□□□ -1.14
VPS11-202ENST00000526829 COX6CP09669 75 aa7.91□□□□□ -1.14
VPS11-202ENST00000526829 RPL39P62891 51 aaKnown RBP7.91□□□□□ -1.14
VPS11-202ENST00000526829 KLKP1Q107X0 134 aa7.91□□□□□ -1.14
VPS11-202ENST00000526829 RHOHQ15669 191 aa7.91□□□□□ -1.14
VPS11-202ENST00000526829 Q6ZVQ6 151 aa7.91□□□□□ -1.14
VPS11-202ENST00000526829 PHF5AQ7RTV0 110 aaKnown RBP7.91□□□□□ -1.14
VPS11-202ENST00000526829 TRBV6-5A0A0K0K1A5 114 aa7.9□□□□□ -1.14
VPS11-202ENST00000526829 TMEM256-PLSCR3K7ERE1 68 aa7.9□□□□□ -1.14
VPS11-202ENST00000526829 ICOSQ9Y6W8 199 aa7.9□□□□□ -1.14
VPS11-202ENST00000526829 A0A0J9YXY3 114 aa7.89□□□□□ -1.15
VPS11-202ENST00000526829 RNASE3P12724 160 aaKnown RBP7.89□□□□□ -1.15
VPS11-202ENST00000526829 SUMO4Q6EEV6 95 aa7.88□□□□□ -1.15
VPS11-202ENST00000526829 IGHV3OR16-13A0A075B7E8 117 aa7.88□□□□□ -1.15
VPS11-202ENST00000526829 A0A0A0MQY5 61 aa7.88□□□□□ -1.15
VPS11-202ENST00000526829 IGHV3-74A0A0B4J1X5 117 aa7.88□□□□□ -1.15
VPS11-202ENST00000526829 TRAV13-2A0A0B4J235 113 aa7.88□□□□□ -1.15
VPS11-202ENST00000526829 LST1O00453 97 aa7.88□□□□□ -1.15
VPS11-202ENST00000526829 LCA10Q71F78 164 aa7.88□□□□□ -1.15
VPS11-202ENST00000526829 C20orf197Q8N268 126 aa7.88□□□□□ -1.15
VPS11-202ENST00000526829 GNRH2O43555 120 aa7.87□□□□□ -1.15
VPS11-202ENST00000526829 TMEM61Q8N0U2 210 aa7.87□□□□□ -1.15
VPS11-202ENST00000526829 LITAFQ99732 161 aa7.87□□□□□ -1.15
VPS11-202ENST00000526829 A8MUN3 132 aa7.86□□□□□ -1.15
VPS11-202ENST00000526829 J3QL48 77 aa7.86□□□□□ -1.15
VPS11-202ENST00000526829 OVOL2Q9BRP0 275 aa7.86□□□□□ -1.15
VPS11-202ENST00000526829 WFDC10AQ9H1F0 79 aa7.86□□□□□ -1.15
VPS11-202ENST00000526829 IGHV3-49A0A0A0MS15 119 aa7.86□□□□□ -1.15
VPS11-202ENST00000526829 RNASE4P34096 147 aaKnown RBP7.86□□□□□ -1.15
VPS11-202ENST00000526829 TNP2Q05952 138 aa7.86□□□□□ -1.15
VPS11-202ENST00000526829 TIMM21Q9BVV7 248 aa7.86□□□□□ -1.15
VPS11-202ENST00000526829 UBE2BP63146 152 aa7.85□□□□□ -1.15
VPS11-202ENST00000526829 MPLKIPQ8TAP9 179 aa7.85□□□□□ -1.15
VPS11-202ENST00000526829 SOCS3O14543 225 aa7.84□□□□□ -1.15
VPS11-202ENST00000526829 INAFM2P0DMQ5 153 aa7.84□□□□□ -1.15
VPS11-202ENST00000526829 MUC4Q99102 2169 aa7.84□□□□□ -1.15
VPS11-202ENST00000526829 IGHV3-30-3P0DP02 117 aa7.84□□□□□ -1.15
VPS11-202ENST00000526829 MIAQ16674 131 aa7.84□□□□□ -1.15
VPS11-202ENST00000526829 CLEC2BQ92478 149 aa7.84□□□□□ -1.15
VPS11-202ENST00000526829 UBE2D4Q9Y2X8 147 aa7.84□□□□□ -1.15
VPS11-202ENST00000526829 A0A0J9YXV3 536 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms