RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, human

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF1-208	ENST00000526821	TRAV8-6	A0A0B4J262	113 aa		4.14	□□□□□ -1.75
ATPAF1-208	ENST00000526821	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.14	□□□□□ -1.75
ATPAF1-208	ENST00000526821	IGHV1-58	A0A0C4DH39	117 aa		4.14	□□□□□ -1.75
ATPAF1-208	ENST00000526821	HNRNPA3	P51991	378 aa	Known RBP	4.14	□□□□□ -1.75
ATPAF1-208	ENST00000526821	TSPEAR-AS2	P59090	65 aa		4.14	□□□□□ -1.75
ATPAF1-208	ENST00000526821	WFDC10B	Q8IUB3	73 aa		4.14	□□□□□ -1.75
ATPAF1-208	ENST00000526821	GEMIN7	Q9H840	131 aa	Known RBP	4.14	□□□□□ -1.75
ATPAF1-208	ENST00000526821	HIGD1B	Q9P298	99 aa		4.14	□□□□□ -1.75
ATPAF1-208	ENST00000526821	TRAV8-3	A0A0A6YYJ7	113 aa		4.13	□□□□□ -1.75
ATPAF1-208	ENST00000526821	MYMX	A0A1B0GTQ4	84 aa		4.13	□□□□□ -1.75
ATPAF1-208	ENST00000526821	SMIM1	B2RUZ4	78 aa		4.13	□□□□□ -1.75
ATPAF1-208	ENST00000526821		H3BRM9	83 aa		4.13	□□□□□ -1.75
ATPAF1-208	ENST00000526821		J3QQQ9	107 aa		4.13	□□□□□ -1.75
ATPAF1-208	ENST00000526821	IGHV3-30-3	P0DP02	117 aa		4.13	□□□□□ -1.75
ATPAF1-208	ENST00000526821	REG3A	Q06141	175 aa		4.13	□□□□□ -1.75
ATPAF1-208	ENST00000526821	BATF	Q16520	125 aa		4.13	□□□□□ -1.75
ATPAF1-208	ENST00000526821	LINC01556	Q5JQF7	62 aa		4.13	□□□□□ -1.75
ATPAF1-208	ENST00000526821	LINC00269	Q8N2A0	174 aa		4.13	□□□□□ -1.75
ATPAF1-208	ENST00000526821	PLEKHB2	Q96CS7	222 aa		4.13	□□□□□ -1.75
ATPAF1-208	ENST00000526821	LINC00588	Q9Y4M8	146 aa		4.13	□□□□□ -1.75
ATPAF1-208	ENST00000526821		A0A087WZ39	114 aa		4.12	□□□□□ -1.75
ATPAF1-208	ENST00000526821	IGLL5	B9A064	214 aa		4.12	□□□□□ -1.75
ATPAF1-208	ENST00000526821	TMEM238	C9JI98	176 aa		4.12	□□□□□ -1.75
ATPAF1-208	ENST00000526821		K7ERU9	68 aa		4.12	□□□□□ -1.75
ATPAF1-208	ENST00000526821	ANG	P03950	147 aa	Known RBP	4.12	□□□□□ -1.75
ATPAF1-208	ENST00000526821	SPINK8	P0C7L1	97 aa		4.12	□□□□□ -1.75
ATPAF1-208	ENST00000526821	DNAH10OS	P0CZ25	163 aa		4.12	□□□□□ -1.75
ATPAF1-208	ENST00000526821	SS18	Q15532	418 aa		4.12	□□□□□ -1.75
ATPAF1-208	ENST00000526821	OCIAD2	Q56VL3	154 aa		4.12	□□□□□ -1.75
ATPAF1-208	ENST00000526821	LCE1E	Q5T753	118 aa		4.12	□□□□□ -1.75
ATPAF1-208	ENST00000526821	ENHO	Q6UWT2	76 aa		4.12	□□□□□ -1.75
ATPAF1-208	ENST00000526821	LINC01561	Q8N1V8	128 aa		4.12	□□□□□ -1.75
ATPAF1-208	ENST00000526821	UPK3B	Q9BT76	320 aa		4.12	□□□□□ -1.75
ATPAF1-208	ENST00000526821	APLN	Q9ULZ1	77 aa		4.12	□□□□□ -1.75
ATPAF1-208	ENST00000526821	VPS13D	Q5THJ4	4388 aa		4.11	□□□□□ -1.75
ATPAF1-208	ENST00000526821	LYST	Q99698	3801 aa		4.11	□□□□□ -1.75
ATPAF1-208	ENST00000526821	IGHV3-64	A0A075B6Q5	118 aa		4.11	□□□□□ -1.75
ATPAF1-208	ENST00000526821	IGKV3OR2-268	A0A0C4DH90	116 aa		4.11	□□□□□ -1.75
ATPAF1-208	ENST00000526821	ZNF815P	A8K554	130 aa		4.11	□□□□□ -1.75
ATPAF1-208	ENST00000526821	IGHV3-30	P01768	117 aa		4.11	□□□□□ -1.75
ATPAF1-208	ENST00000526821	IGHV3-33	P01772	117 aa		4.11	□□□□□ -1.75
ATPAF1-208	ENST00000526821	IGHV3-30-5	P0DP03	117 aa		4.11	□□□□□ -1.75
ATPAF1-208	ENST00000526821	LGALS3	P17931	250 aa	Known RBP	4.11	□□□□□ -1.75
ATPAF1-208	ENST00000526821	ZFAND6	Q6FIF0	208 aa		4.11	□□□□□ -1.75
ATPAF1-208	ENST00000526821	KRTAP26-1	Q6PEX3	210 aa		4.11	□□□□□ -1.75
ATPAF1-208	ENST00000526821	CLPSL2	Q6UWE3	100 aa		4.11	□□□□□ -1.75
ATPAF1-208	ENST00000526821	CD164L2	Q6UWJ8	174 aa		4.11	□□□□□ -1.75
ATPAF1-208	ENST00000526821	C10orf126	Q8N4M7	172 aa		4.11	□□□□□ -1.75
ATPAF1-208	ENST00000526821	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.11	□□□□□ -1.75
ATPAF1-208	ENST00000526821	KLK12	Q9UKR0	248 aa		4.11	□□□□□ -1.75
ATPAF1-208	ENST00000526821	TRAV8-4	A0A0B4J246	113 aa		4.1	□□□□□ -1.75
ATPAF1-208	ENST00000526821	NDUFA1	O15239	70 aa		4.1	□□□□□ -1.75
ATPAF1-208	ENST00000526821	SCGB1A1	P11684	91 aa		4.1	□□□□□ -1.75
ATPAF1-208	ENST00000526821	XCL1	P47992	114 aa		4.1	□□□□□ -1.75
ATPAF1-208	ENST00000526821	CCL18	P55774	89 aa		4.1	□□□□□ -1.75
ATPAF1-208	ENST00000526821	HSD52	Q0P140	79 aa		4.1	□□□□□ -1.75
ATPAF1-208	ENST00000526821	TAL2	Q16559	108 aa		4.1	□□□□□ -1.75
ATPAF1-208	ENST00000526821	MIA	Q16674	131 aa		4.1	□□□□□ -1.75
ATPAF1-208	ENST00000526821	SERTAD4-AS1	Q5TG53	156 aa		4.1	□□□□□ -1.75
ATPAF1-208	ENST00000526821	ZNF625	Q96I27	306 aa	Predicted RBP	4.1	□□□□□ -1.75
ATPAF1-208	ENST00000526821	VPS25	Q9BRG1	176 aa		4.1	□□□□□ -1.75
ATPAF1-208	ENST00000526821		A0A0J9YXY3	114 aa		4.09	□□□□□ -1.75
ATPAF1-208	ENST00000526821	NUPR2	A6NF83	97 aa		4.09	□□□□□ -1.75
ATPAF1-208	ENST00000526821	TAX1BP3	O14907	124 aa		4.09	□□□□□ -1.75
ATPAF1-208	ENST00000526821	BVES-AS1	Q5T3Y7	98 aa		4.09	□□□□□ -1.75
ATPAF1-208	ENST00000526821	C5orf38	Q86SI9	138 aa		4.09	□□□□□ -1.75
ATPAF1-208	ENST00000526821	UBE2W	Q96B02	151 aa		4.09	□□□□□ -1.75
ATPAF1-208	ENST00000526821	LITAF	Q99732	161 aa		4.09	□□□□□ -1.75
ATPAF1-208	ENST00000526821	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.09	□□□□□ -1.75
ATPAF1-208	ENST00000526821	NDUFA12	Q9UI09	145 aa		4.09	□□□□□ -1.75
ATPAF1-208	ENST00000526821	TENM2	Q9NT68	2774 aa		4.08	□□□□□ -1.76
ATPAF1-208	ENST00000526821	IGLV10-54	A0A075B6I4	117 aa		4.08	□□□□□ -1.76
ATPAF1-208	ENST00000526821	IBA57-AS1	B1ANH7	110 aa		4.08	□□□□□ -1.76
ATPAF1-208	ENST00000526821	COX7A2L	O14548	114 aa		4.08	□□□□□ -1.76
ATPAF1-208	ENST00000526821	CRP	P02741	224 aa		4.08	□□□□□ -1.76
ATPAF1-208	ENST00000526821	HINT1	P49773	126 aa	Predicted RBP	4.08	□□□□□ -1.76
ATPAF1-208	ENST00000526821	KIAA0087	Q14695	138 aa		4.08	□□□□□ -1.76
ATPAF1-208	ENST00000526821	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.08	□□□□□ -1.76
ATPAF1-208	ENST00000526821	SCGB1D4	Q6XE38	83 aa		4.08	□□□□□ -1.76
ATPAF1-208	ENST00000526821		Q8IZM0	81 aa		4.08	□□□□□ -1.76
ATPAF1-208	ENST00000526821	COX7B2	Q8TF08	81 aa		4.08	□□□□□ -1.76
ATPAF1-208	ENST00000526821	KLK5	Q9Y337	293 aa	Predicted RBP	4.08	□□□□□ -1.76
ATPAF1-208	ENST00000526821	TIMM17B	O60830	172 aa		4.07	□□□□□ -1.76
ATPAF1-208	ENST00000526821	VAMP3	Q15836	100 aa		4.07	□□□□□ -1.76
ATPAF1-208	ENST00000526821	CEND1	Q8N111	149 aa		4.07	□□□□□ -1.76
ATPAF1-208	ENST00000526821		Q9H8V8	135 aa		4.07	□□□□□ -1.76
ATPAF1-208	ENST00000526821	DNAH10	Q8IVF4	4471 aa		4.07	□□□□□ -1.76
ATPAF1-208	ENST00000526821	TG	P01266	2768 aa		4.06	□□□□□ -1.76
ATPAF1-208	ENST00000526821	FXYD2	P54710	66 aa		4.06	□□□□□ -1.76
ATPAF1-208	ENST00000526821	SEC61B	P60468	96 aa	Known RBP	4.06	□□□□□ -1.76
ATPAF1-208	ENST00000526821	HERV-K104	P63124	156 aa		4.06	□□□□□ -1.76
ATPAF1-208	ENST00000526821	ADAMTSL4-AS1	Q5T5F5	129 aa		4.06	□□□□□ -1.76
ATPAF1-208	ENST00000526821	SFTA2	Q6UW10	78 aa		4.06	□□□□□ -1.76
ATPAF1-208	ENST00000526821		Q6ZVH6	145 aa		4.06	□□□□□ -1.76
ATPAF1-208	ENST00000526821	HIST1H4G	Q99525	98 aa		4.06	□□□□□ -1.76
ATPAF1-208	ENST00000526821	SPANXD	Q9BXN6	97 aa		4.06	□□□□□ -1.76
ATPAF1-208	ENST00000526821	SPANXC	Q9NY87	97 aa		4.06	□□□□□ -1.76
ATPAF1-208	ENST00000526821		A0A1B0GWB2	263 aa		4.05	□□□□□ -1.76
ATPAF1-208	ENST00000526821	APOM	O95445	188 aa		4.05	□□□□□ -1.76
ATPAF1-208	ENST00000526821	C6orf226	Q5I0X4	101 aa		4.05	□□□□□ -1.76

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