RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 C9orf153Q5TBE3 101 aa8.1□□□□□ -1.11
LINC01001-201ENST00000526704 SDIM1Q6ZPB5 146 aa8.1□□□□□ -1.11
LINC01001-201ENST00000526704 LINC00643Q86TS7 51 aa8.1□□□□□ -1.11
LINC01001-201ENST00000526704 KIR2DL5BQ8NHK3 375 aa8.1□□□□□ -1.11
LINC01001-201ENST00000526704 ITPR2Q14571 2701 aa8.1□□□□□ -1.11
LINC01001-201ENST00000526704 GYPEP15421 78 aa8.1□□□□□ -1.11
LINC01001-201ENST00000526704 C11orf68Q9H3H3 251 aaKnown RBP8.1□□□□□ -1.11
LINC01001-201ENST00000526704 UQCRQO14949 82 aa8.09□□□□□ -1.11
LINC01001-201ENST00000526704 ATP5G1P05496 136 aa8.09□□□□□ -1.12
LINC01001-201ENST00000526704 HILS1P60008 231 aa8.09□□□□□ -1.12
LINC01001-201ENST00000526704 INAFM2P0DMQ5 153 aa8.08□□□□□ -1.12
LINC01001-201ENST00000526704 KRTAP10-3P60369 221 aa8.08□□□□□ -1.12
LINC01001-201ENST00000526704 XCL1P47992 114 aa8.08□□□□□ -1.12
LINC01001-201ENST00000526704 LINC00526Q96FQ7 95 aa8.08□□□□□ -1.12
LINC01001-201ENST00000526704 X6R8D5 127 aa8.08□□□□□ -1.12
LINC01001-201ENST00000526704 C5orf47Q569G3 176 aa8.07□□□□□ -1.12
LINC01001-201ENST00000526704 A0A1B0GUV1 79 aa8.07□□□□□ -1.12
LINC01001-201ENST00000526704 PAX4O43316 350 aa8.07□□□□□ -1.12
LINC01001-201ENST00000526704 DNAL4O96015 105 aa8.07□□□□□ -1.12
LINC01001-201ENST00000526704 C9orf129Q5T035 196 aaKnown RBP8.07□□□□□ -1.12
LINC01001-201ENST00000526704 CLPSL2Q6UWE3 100 aa8.07□□□□□ -1.12
LINC01001-201ENST00000526704 H0YGX0 51 aa8.06□□□□□ -1.12
LINC01001-201ENST00000526704 LY6G6DO95868 133 aa8.06□□□□□ -1.12
LINC01001-201ENST00000526704 CXCL5P42830 114 aa8.06□□□□□ -1.12
LINC01001-201ENST00000526704 C6orf226Q5I0X4 101 aa8.06□□□□□ -1.12
LINC01001-201ENST00000526704 GAGE2AQ6NT46 116 aa8.06□□□□□ -1.12
LINC01001-201ENST00000526704 A0A1B0GX51 115 aa8.06□□□□□ -1.12
LINC01001-201ENST00000526704 SS18Q15532 418 aa8.06□□□□□ -1.12
LINC01001-201ENST00000526704 Q8IZM0 81 aa8.06□□□□□ -1.12
LINC01001-201ENST00000526704 NBEAL2Q6ZNJ1 2754 aa8.05□□□□□ -1.12
LINC01001-201ENST00000526704 A0A096LPF7 62 aa8.05□□□□□ -1.12
LINC01001-201ENST00000526704 LINC00482Q8N8I6 264 aa8.05□□□□□ -1.12
LINC01001-201ENST00000526704 J3KT08 172 aa8.05□□□□□ -1.12
LINC01001-201ENST00000526704 LECT2O14960 151 aa8.04□□□□□ -1.12
LINC01001-201ENST00000526704 OR13C6PQ8NH95 151 aa8.04□□□□□ -1.12
LINC01001-201ENST00000526704 PRO0255Q9UI72 69 aa8.04□□□□□ -1.12
LINC01001-201ENST00000526704 LOC107984640A0A0U1RRK4 108 aa8.04□□□□□ -1.12
LINC01001-201ENST00000526704 OBSCN-AS1Q96MR7 158 aa8.04□□□□□ -1.12
LINC01001-201ENST00000526704 VWFP04275 2813 aa8.04□□□□□ -1.12
LINC01001-201ENST00000526704 COX7CP15954 63 aa8.03□□□□□ -1.12
LINC01001-201ENST00000526704 LINC01561Q8N1V8 128 aa8.03□□□□□ -1.12
LINC01001-201ENST00000526704 C14orf132Q9NPU4 83 aa8.03□□□□□ -1.12
LINC01001-201ENST00000526704 SMIM9A6NGZ8 99 aa8.02□□□□□ -1.13
LINC01001-201ENST00000526704 RPS28P62857 69 aaKnown RBP8.02□□□□□ -1.13
LINC01001-201ENST00000526704 FAM19A5Q7Z5A7 132 aaPredicted RBP8.01□□□□□ -1.13
LINC01001-201ENST00000526704 Q8N3U1 123 aa8.01□□□□□ -1.13
LINC01001-201ENST00000526704 SPATA3Q8NHX4 192 aa8.01□□□□□ -1.13
LINC01001-201ENST00000526704 SLPIP03973 132 aa8.01□□□□□ -1.13
LINC01001-201ENST00000526704 CRYGAP11844 174 aa8.01□□□□□ -1.13
LINC01001-201ENST00000526704 NANOS2P60321 138 aaKnown RBP8.01□□□□□ -1.13
LINC01001-201ENST00000526704 KIAA0087Q14695 138 aa8.01□□□□□ -1.13
LINC01001-201ENST00000526704 UNC79Q9P2D8 2635 aa8□□□□□ -1.13
LINC01001-201ENST00000526704 LINC00269Q8N2A0 174 aa8□□□□□ -1.13
LINC01001-201ENST00000526704 SMR3AQ99954 134 aa8□□□□□ -1.13
LINC01001-201ENST00000526704 KLK5Q9Y337 293 aaPredicted RBP8□□□□□ -1.13
LINC01001-201ENST00000526704 LYRM9A8MSI8 78 aa8□□□□□ -1.13
LINC01001-201ENST00000526704 NCR3O14931 201 aa8□□□□□ -1.13
LINC01001-201ENST00000526704 PRR3P79522 188 aaKnown RBP7.99□□□□□ -1.13
LINC01001-201ENST00000526704 CD164L2Q6UWJ8 174 aa7.99□□□□□ -1.13
LINC01001-201ENST00000526704 C2orf48Q96LS8 159 aa7.99□□□□□ -1.13
LINC01001-201ENST00000526704 HIVEP2P31629 2446 aa7.99□□□□□ -1.13
LINC01001-201ENST00000526704 DEFB4AO15263 64 aa7.99□□□□□ -1.13
LINC01001-201ENST00000526704 CHCHD10Q8WYQ3 142 aaPredicted RBP7.99□□□□□ -1.13
LINC01001-201ENST00000526704 IGLV10-54A0A075B6I4 117 aa7.98□□□□□ -1.13
LINC01001-201ENST00000526704 DEFB135Q30KP9 77 aa7.98□□□□□ -1.13
LINC01001-201ENST00000526704 LINC00167Q96N53 147 aa7.98□□□□□ -1.13
LINC01001-201ENST00000526704 ATOX1O00244 68 aa7.98□□□□□ -1.13
LINC01001-201ENST00000526704 ORMDL1Q9P0S3 153 aa7.98□□□□□ -1.13
LINC01001-201ENST00000526704 HIST1H4AP62805 103 aaKnown RBP7.97□□□□□ -1.13
LINC01001-201ENST00000526704 NDUFC2O95298 119 aa7.97□□□□□ -1.13
LINC01001-201ENST00000526704 ANGP03950 147 aaKnown RBP7.97□□□□□ -1.13
LINC01001-201ENST00000526704 REG3AQ06141 175 aa7.97□□□□□ -1.13
LINC01001-201ENST00000526704 COX17Q14061 63 aa7.97□□□□□ -1.13
LINC01001-201ENST00000526704 C9orf116Q5BN46 136 aaPredicted RBP7.97□□□□□ -1.13
LINC01001-201ENST00000526704 LINC00846Q9NV44 126 aa7.97□□□□□ -1.13
LINC01001-201ENST00000526704 FASNP49327 2511 aaKnown RBP7.96□□□□□ -1.13
LINC01001-201ENST00000526704 HELZ2Q9BYK8 2649 aaKnown RBP7.96□□□□□ -1.13
LINC01001-201ENST00000526704 Q8NDZ9 215 aa7.96□□□□□ -1.13
LINC01001-201ENST00000526704 IGHV4-28A0A0C4DH34 117 aa7.96□□□□□ -1.14
LINC01001-201ENST00000526704 WIPF1O43516 503 aa7.96□□□□□ -1.14
LINC01001-201ENST00000526704 CELA1Q9UNI1 258 aa7.95□□□□□ -1.14
LINC01001-201ENST00000526704 C9orf66Q5T8R8 295 aa7.95□□□□□ -1.14
LINC01001-201ENST00000526704 Q8N814 137 aa7.95□□□□□ -1.14
LINC01001-201ENST00000526704 hADV29S1A0JD25 119 aa7.94□□□□□ -1.14
LINC01001-201ENST00000526704 DAD1P61803 113 aa7.94□□□□□ -1.14
LINC01001-201ENST00000526704 Q6JHZ5 121 aa7.94□□□□□ -1.14
LINC01001-201ENST00000526704 TENM1Q9UKZ4 2725 aa7.94□□□□□ -1.14
LINC01001-201ENST00000526704 IGKV3D-7A0A0C4DH55 119 aa7.93□□□□□ -1.14
LINC01001-201ENST00000526704 TMEM258P61165 79 aa7.92□□□□□ -1.14
LINC01001-201ENST00000526704 RPL18AQ02543 176 aaKnown RBP7.92□□□□□ -1.14
LINC01001-201ENST00000526704 Q8NAQ8 132 aa7.92□□□□□ -1.14
LINC01001-201ENST00000526704 CCKP06307 115 aa7.92□□□□□ -1.14
LINC01001-201ENST00000526704 APOC4P55056 127 aa7.92□□□□□ -1.14
LINC01001-201ENST00000526704 C6orf223Q8N319 242 aa7.92□□□□□ -1.14
LINC01001-201ENST00000526704 C10orf25Q5T742 122 aa7.91□□□□□ -1.14
LINC01001-201ENST00000526704 DPH3Q96FX2 82 aa7.91□□□□□ -1.14
LINC01001-201ENST00000526704 SPAG11BQ08648 103 aa7.9□□□□□ -1.14
LINC01001-201ENST00000526704 C6orf99Q4VX62 202 aa7.9□□□□□ -1.14
LINC01001-201ENST00000526704 J3QKU1 62 aa7.9□□□□□ -1.15
LINC01001-201ENST00000526704 UNQ6190/PRO20217Q6UXQ8 127 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms