RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 RIGQ13278 110 aa7.61□□□□□ -1.19
SSRP1-203ENST00000526696 TMEM136Q6ZRR5 245 aa7.61□□□□□ -1.19
SSRP1-203ENST00000526696 TMEM18Q96B42 140 aa7.61□□□□□ -1.19
SSRP1-203ENST00000526696 C6orf48Q9UBA6 75 aa7.61□□□□□ -1.19
SSRP1-203ENST00000526696 UBE2D4Q9Y2X8 147 aa7.61□□□□□ -1.19
SSRP1-203ENST00000526696 TCAPO15273 167 aa7.6□□□□□ -1.19
SSRP1-203ENST00000526696 TRGC2P03986 189 aa7.6□□□□□ -1.19
SSRP1-203ENST00000526696 RAB5BP61020 215 aa7.6□□□□□ -1.19
SSRP1-203ENST00000526696 SUMO2P61956 95 aaKnown RBP7.6□□□□□ -1.19
SSRP1-203ENST00000526696 HBBP68871 147 aa7.6□□□□□ -1.19
SSRP1-203ENST00000526696 C9orf129Q5T035 196 aaKnown RBP7.6□□□□□ -1.19
SSRP1-203ENST00000526696 MRPL54Q6P161 138 aaKnown RBP7.6□□□□□ -1.19
SSRP1-203ENST00000526696 UNQ6190/PRO20217Q6UXQ8 127 aa7.6□□□□□ -1.19
SSRP1-203ENST00000526696 AMN1Q8IY45 258 aa7.6□□□□□ -1.19
SSRP1-203ENST00000526696 OR10D4PQ8NGN7 298 aa7.6□□□□□ -1.19
SSRP1-203ENST00000526696 NUPR1O60356 82 aa7.59□□□□□ -1.19
SSRP1-203ENST00000526696 GHRHP01286 108 aa7.59□□□□□ -1.19
SSRP1-203ENST00000526696 TRAPPC1Q9Y5R8 145 aa7.59□□□□□ -1.19
SSRP1-203ENST00000526696 MACF1Q9UPN3 7388 aaKnown RBP7.58□□□□□ -1.2
SSRP1-203ENST00000526696 CTAG1AP78358 180 aa7.58□□□□□ -1.2
SSRP1-203ENST00000526696 FP248Q71RG6 208 aaPredicted RBP7.58□□□□□ -1.2
SSRP1-203ENST00000526696 NRACQ8N912 160 aa7.58□□□□□ -1.2
SSRP1-203ENST00000526696 MRPL18Q9H0U6 180 aaKnown RBP7.58□□□□□ -1.2
SSRP1-203ENST00000526696 TRAV13-1A0A0B4J241 112 aa7.57□□□□□ -1.2
SSRP1-203ENST00000526696 RPL28P46779 137 aaKnown RBP7.57□□□□□ -1.2
SSRP1-203ENST00000526696 RPL32P62910 135 aaKnown RBP7.57□□□□□ -1.2
SSRP1-203ENST00000526696 FABP9Q0Z7S8 132 aa7.57□□□□□ -1.2
SSRP1-203ENST00000526696 RNASE13Q5GAN3 156 aaKnown RBP7.57□□□□□ -1.2
SSRP1-203ENST00000526696 C20orf78Q9BR46 151 aa7.57□□□□□ -1.2
SSRP1-203ENST00000526696 NDUFA1O15239 70 aa7.56□□□□□ -1.2
SSRP1-203ENST00000526696 HIST1H2BKO60814 126 aa7.56□□□□□ -1.2
SSRP1-203ENST00000526696 HIST1H2BJP06899 126 aa7.56□□□□□ -1.2
SSRP1-203ENST00000526696 HIST1H2BOP23527 126 aa7.56□□□□□ -1.2
SSRP1-203ENST00000526696 HIST1H2BBP33778 126 aa7.56□□□□□ -1.2
SSRP1-203ENST00000526696 HIST1H2BDP58876 126 aa7.56□□□□□ -1.2
SSRP1-203ENST00000526696 HIST1H2BCP62807 126 aa7.56□□□□□ -1.2
SSRP1-203ENST00000526696 HIST2H2BEQ16778 126 aa7.56□□□□□ -1.2
SSRP1-203ENST00000526696 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.56□□□□□ -1.2
SSRP1-203ENST00000526696 HIST1H2BHQ93079 126 aa7.56□□□□□ -1.2
SSRP1-203ENST00000526696 HIST1H2BNQ99877 126 aa7.56□□□□□ -1.2
SSRP1-203ENST00000526696 HIST1H2BMQ99879 126 aa7.56□□□□□ -1.2
SSRP1-203ENST00000526696 TMA7Q9Y2S6 64 aaKnown RBP7.56□□□□□ -1.2
SSRP1-203ENST00000526696 FAM229BQ4G0N7 80 aa7.55□□□□□ -1.2
SSRP1-203ENST00000526696 COA6Q5JTJ3 125 aaKnown RBP7.55□□□□□ -1.2
SSRP1-203ENST00000526696 FAM104BQ5XKR9 115 aa7.55□□□□□ -1.2
SSRP1-203ENST00000526696 Q6ZUT4 128 aa7.55□□□□□ -1.2
SSRP1-203ENST00000526696 ORAOV1Q8WV07 137 aa7.55□□□□□ -1.2
SSRP1-203ENST00000526696 SPANXA1Q9NS26 97 aa7.55□□□□□ -1.2
SSRP1-203ENST00000526696 IGHV3OR16-9A0A0B4J2B5 98 aa7.54□□□□□ -1.2
SSRP1-203ENST00000526696 SMKR1H3BMG3 65 aa7.54□□□□□ -1.2
SSRP1-203ENST00000526696 BCE1O60756 84 aa7.54□□□□□ -1.2
SSRP1-203ENST00000526696 MRPS36P82909 103 aaKnown RBP7.54□□□□□ -1.2
SSRP1-203ENST00000526696 MRPL51Q4U2R6 128 aaKnown RBP7.53□□□□□ -1.2
SSRP1-203ENST00000526696 C22orf24Q9Y442 160 aa7.53□□□□□ -1.2
SSRP1-203ENST00000526696 C5orf52A6NGY3 159 aa7.52□□□□□ -1.21
SSRP1-203ENST00000526696 ALKBH7Q9BT30 221 aaPredicted RBP7.52□□□□□ -1.21
SSRP1-203ENST00000526696 IGKV2D-26A0A0A0MRZ7 120 aa7.51□□□□□ -1.21
SSRP1-203ENST00000526696 PPBPP02775 128 aa7.51□□□□□ -1.21
SSRP1-203ENST00000526696 S100A6P06703 90 aa7.51□□□□□ -1.21
SSRP1-203ENST00000526696 CKS2P33552 79 aa7.51□□□□□ -1.21
SSRP1-203ENST00000526696 KRTAP13-1Q8IUC0 172 aa7.51□□□□□ -1.21
SSRP1-203ENST00000526696 FAM104AQ969W3 186 aa7.51□□□□□ -1.21
SSRP1-203ENST00000526696 SMIM2Q9BVW6 85 aa7.51□□□□□ -1.21
SSRP1-203ENST00000526696 NDUFC2-KCTD14E9PQ53 114 aa7.5□□□□□ -1.21
SSRP1-203ENST00000526696 TNFRSF6BO95407 300 aa7.5□□□□□ -1.21
SSRP1-203ENST00000526696 RPL39P62891 51 aaKnown RBP7.5□□□□□ -1.21
SSRP1-203ENST00000526696 KIAA1644Q3SXP7 199 aa7.5□□□□□ -1.21
SSRP1-203ENST00000526696 XP32Q5T750 250 aa7.5□□□□□ -1.21
SSRP1-203ENST00000526696 C3orf22Q8N5N4 141 aa7.5□□□□□ -1.21
SSRP1-203ENST00000526696 TRBV30A0A0K0K1B3 111 aa7.49□□□□□ -1.21
SSRP1-203ENST00000526696 IFITM10A6NMD0 228 aa7.49□□□□□ -1.21
SSRP1-203ENST00000526696 M0R2T5 61 aa7.49□□□□□ -1.21
SSRP1-203ENST00000526696 NDUFA6P56556 154 aa7.49□□□□□ -1.21
SSRP1-203ENST00000526696 KIAA0087Q14695 138 aa7.49□□□□□ -1.21
SSRP1-203ENST00000526696 LAMTOR2Q9Y2Q5 125 aa7.49□□□□□ -1.21
SSRP1-203ENST00000526696 LOC105371267A0A1B0GV96 52 aa7.48□□□□□ -1.21
SSRP1-203ENST00000526696 SNRPEP62304 92 aaKnown RBP7.48□□□□□ -1.21
SSRP1-203ENST00000526696 ORMDL3Q8N138 153 aa7.48□□□□□ -1.21
SSRP1-203ENST00000526696 C18orf32Q8TCD1 76 aa7.48□□□□□ -1.21
SSRP1-203ENST00000526696 PYGO1Q9Y3Y4 419 aa7.48□□□□□ -1.21
SSRP1-203ENST00000526696 PRSS47A8MTI9 375 aa7.47□□□□□ -1.21
SSRP1-203ENST00000526696 IFI27P40305 119 aaPredicted RBP7.47□□□□□ -1.21
SSRP1-203ENST00000526696 C2orf82Q6UX34 121 aa7.47□□□□□ -1.21
SSRP1-203ENST00000526696 LINC01561Q8N1V8 128 aa7.47□□□□□ -1.21
SSRP1-203ENST00000526696 PRELID3AQ96N28 172 aa7.47□□□□□ -1.21
SSRP1-203ENST00000526696 D6R8Y8 96 aa7.46□□□□□ -1.22
SSRP1-203ENST00000526696 KRTAP4-16G5E9R7 235 aaPredicted RBP7.45□□□□□ -1.22
SSRP1-203ENST00000526696 NPYP01303 97 aa7.45□□□□□ -1.22
SSRP1-203ENST00000526696 LINC00310P59036 64 aa7.45□□□□□ -1.22
SSRP1-203ENST00000526696 LBHQ53QV2 105 aaPredicted RBP7.45□□□□□ -1.22
SSRP1-203ENST00000526696 BAGE3Q86Y29 109 aa7.45□□□□□ -1.22
SSRP1-203ENST00000526696 HIST3H2BBQ8N257 126 aa7.45□□□□□ -1.22
SSRP1-203ENST00000526696 LINC00469Q8N7U9 141 aa7.45□□□□□ -1.22
SSRP1-203ENST00000526696 PACRGQ96M98 296 aaPredicted RBP7.45□□□□□ -1.22
SSRP1-203ENST00000526696 LINC01546A6NGU7 62 aa7.44□□□□□ -1.22
SSRP1-203ENST00000526696 MRPL55Q7Z7F7 128 aaKnown RBP7.44□□□□□ -1.22
SSRP1-203ENST00000526696 CHCHD1Q96BP2 118 aaKnown RBP7.44□□□□□ -1.22
SSRP1-203ENST00000526696 TMEM141Q96I45 108 aa7.44□□□□□ -1.22
SSRP1-203ENST00000526696 RPL37AP8A6NKH3 93 aa7.43□□□□□ -1.22
SSRP1-203ENST00000526696 SERF1AO75920 110 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms