RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 LINC00158P58513 81 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 KLK9Q2XQG4 91 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 C10orf99Q6UWK7 81 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 DEFB132Q7Z7B7 95 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 MRPL34Q9BQ48 92 aaKnown RBP0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 DIDO1Q9BTC0 2240 aaKnown RBP0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 ANKRD50Q9ULJ7 1429 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 ADGRB2O60241 1585 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 THOC2Q8NI27 1593 aaKnown RBP0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 IFT172Q9UG01 1749 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 CHD3Q12873 2000 aaKnown RBP0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 RP1L1Q8IWN7 2480 aaPredicted RBP0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 PSME4Q14997 1843 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 FREM3P0C091 2139 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 PTPRFP10586 1907 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 RGPD3A6NKT7 1758 aaPredicted RBP0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 DLEC1Q9Y238 1755 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 KIAA0556O60303 1618 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 MYO3AQ8NEV4 1616 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 MADDQ8WXG6 1647 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 PXDNQ92626 1479 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 RP1P56715 2156 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 CR1P17927 2039 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 PDCD11Q14690 1871 aaKnown RBP0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 GBF1Q92538 1859 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 LRRIQ1Q96JM4 1722 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 ADAMTS12P58397 1594 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 SMIM27A0A1W2PRY6 76 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 H0YGG7 62 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 H0YGX0 51 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 SPTBP11277 2137 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 PRLHP81277 87 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 WFDC10BQ8IUB3 73 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 WFDC13Q8IUB5 93 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 SPRR4Q96PI1 79 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 CNFNQ9BYD5 112 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 LINC00472Q9H8W2 130 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 BTAF1O14981 1849 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 DOCK2Q92608 1830 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 TET3O43151 1660 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 SCN7AQ01118 1682 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 CTTNBP2Q8WZ74 1663 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 ADAMTS7Q9UKP4 1686 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 ASXL1Q8IXJ9 1541 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 ARHGAP32A7KAX9 2087 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 MYO18AQ92614 2054 aaKnown RBP0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 MYH8P13535 1937 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 PTPRDP23468 1912 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 DLG5Q8TDM6 1919 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 BAZ2BQ9UIF8 2168 aaKnown RBP0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 ZFHX2Q9C0A1 2572 aaPredicted RBP0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 IQGAP3Q86VI3 1631 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 CCDC88CQ9P219 2028 aa0.42□□□□□ -2.34
ECHDC1-219ENST00000526299 TANC1Q9C0D5 1861 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 MYO5CQ9NQX4 1742 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 PCDH15Q96QU1 1955 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 KIAA1549Q9HCM3 1950 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 UGGT1Q9NYU2 1555 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 DIP2BQ9P265 1576 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 UNC13CQ8NB66 2214 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 ZNF236Q9UL36 1845 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 ARFGEF1Q9Y6D6 1849 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 C5P01031 1676 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 TCHHQ07283 1943 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 ARFGEF3Q5TH69 2177 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 MED13Q9UHV7 2174 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 SPINK1P00995 79 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 HMGA1P17096 107 aaKnown RBP0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 TFF3Q07654 80 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 DEFB109BQ30KR1 87 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 H1FX-AS1Q4G0G2 97 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 LINC00308Q8TCZ7 52 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 C10orf95Q9H7T3 257 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 CMC2Q9NRP2 79 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 TMEM167BQ9NRX6 74 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 C6orf48Q9UBA6 75 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 KAAG1Q9UBP8 84 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 PIK3C2BO00750 1634 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 LRP6O75581 1613 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 MED12LQ86YW9 2145 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 PHRF1Q9P1Y6 1649 aaKnown RBP0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 PLXNA1Q9UIW2 1896 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 EML5Q05BV3 1969 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 MUC5BQ9HC84 5762 aaPredicted RBP0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 AFDNP55196 1824 aaKnown RBP0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 LTBP2Q14767 1821 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 PATJQ8NI35 1801 aa0.41□□□□□ -2.34
ECHDC1-219ENST00000526299 DIP2AQ14689 1571 aa0.4□□□□□ -2.34
ECHDC1-219ENST00000526299 SAMD9Q5K651 1589 aa0.4□□□□□ -2.34
ECHDC1-219ENST00000526299 INO80Q9ULG1 1556 aaPredicted RBP0.4□□□□□ -2.34
ECHDC1-219ENST00000526299 DIP2CQ9Y2E4 1556 aa0.4□□□□□ -2.34
ECHDC1-219ENST00000526299 FREM1Q5H8C1 2179 aa0.4□□□□□ -2.34
ECHDC1-219ENST00000526299 ALPK2Q86TB3 2170 aa0.4□□□□□ -2.34
ECHDC1-219ENST00000526299 AKAP11Q9UKA4 1901 aa0.4□□□□□ -2.34
ECHDC1-219ENST00000526299 ZC3H13Q5T200 1668 aaKnown RBP0.4□□□□□ -2.34
ECHDC1-219ENST00000526299 LOC285556D6RIA3 1793 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 SNRNP200O75643 2136 aaKnown RBP0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 ESPL1Q14674 2120 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 ZGRF1Q86YA3 2104 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms