RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 FAT4Q6V0I7 4981 aa14.09□□□□□ -0.15
USP47-205ENST00000525257 BCE1O60756 84 aa14.08□□□□□ -0.16
USP47-205ENST00000525257 CRYGAP11844 174 aa14.08□□□□□ -0.16
USP47-205ENST00000525257 Q8N8P6 123 aa14.08□□□□□ -0.16
USP47-205ENST00000525257 TP73-AS1Q9UF72 201 aa14.08□□□□□ -0.16
USP47-205ENST00000525257 LAMTOR2Q9Y2Q5 125 aa14.08□□□□□ -0.16
USP47-205ENST00000525257 F8VRH5 84 aa14.06□□□□□ -0.16
USP47-205ENST00000525257 FAM19A3Q7Z5A8 133 aa14.06□□□□□ -0.16
USP47-205ENST00000525257 CDKN2A-AS1Q9UH64 79 aa14.06□□□□□ -0.16
USP47-205ENST00000525257 IGIPA6NJ69 53 aa14.05□□□□□ -0.16
USP47-205ENST00000525257 RPL37AP8A6NKH3 93 aa14.04□□□□□ -0.16
USP47-205ENST00000525257 HERVK_113P63121 156 aa14.04□□□□□ -0.16
USP47-205ENST00000525257 ORMDL2Q53FV1 153 aa14.04□□□□□ -0.16
USP47-205ENST00000525257 ANAPC11Q9NYG5 84 aa14.04□□□□□ -0.16
USP47-205ENST00000525257 NPSP0C0P6 89 aa14.03□□□□□ -0.16
USP47-205ENST00000525257 LINC00167Q96N53 147 aa14.03□□□□□ -0.16
USP47-205ENST00000525257 LCE2AQ5TA79 106 aaPredicted RBP14.02□□□□□ -0.17
USP47-205ENST00000525257 GEMIN7Q9H840 131 aaKnown RBP14.02□□□□□ -0.17
USP47-205ENST00000525257 GAGE10A6NGK3 116 aa14.01□□□□□ -0.17
USP47-205ENST00000525257 SEC11AP67812 179 aa14.01□□□□□ -0.17
USP47-205ENST00000525257 RETNLBQ9BQ08 111 aa14.01□□□□□ -0.17
USP47-205ENST00000525257 MUC17Q685J3 4493 aa14□□□□□ -0.17
USP47-205ENST00000525257 CXCL5P42830 114 aa13.99□□□□□ -0.17
USP47-205ENST00000525257 KRTAP13-2Q52LG2 175 aa13.99□□□□□ -0.17
USP47-205ENST00000525257 PAPPA-AS1Q5QFB9 102 aa13.98□□□□□ -0.17
USP47-205ENST00000525257 K7EMI3 77 aa13.97□□□□□ -0.17
USP47-205ENST00000525257 SMIM1B2RUZ4 78 aa13.95□□□□□ -0.18
USP47-205ENST00000525257 UBE2AP49459 152 aa13.95□□□□□ -0.18
USP47-205ENST00000525257 TIMM17AQ99595 171 aa13.95□□□□□ -0.18
USP47-205ENST00000525257 NXT2Q9NPJ8 142 aaKnown RBP13.95□□□□□ -0.18
USP47-205ENST00000525257 KRTAP13-1Q8IUC0 172 aa13.94□□□□□ -0.18
USP47-205ENST00000525257 COX7B2Q8TF08 81 aa13.94□□□□□ -0.18
USP47-205ENST00000525257 LINC00304Q8N9R0 145 aa13.93□□□□□ -0.18
USP47-205ENST00000525257 RAB5BP61020 215 aa13.92□□□□□ -0.18
USP47-205ENST00000525257 NKAPP1Q8N9T2 125 aa13.92□□□□□ -0.18
USP47-205ENST00000525257 TOMM6Q96B49 74 aa13.92□□□□□ -0.18
USP47-205ENST00000525257 PNRC1Q12796 327 aaPredicted RBP13.91□□□□□ -0.18
USP47-205ENST00000525257 FAM229BQ4G0N7 80 aa13.91□□□□□ -0.18
USP47-205ENST00000525257 PDZD11Q5EBL8 140 aa13.91□□□□□ -0.18
USP47-205ENST00000525257 IGLV5-37A0A075B6J1 123 aa13.9□□□□□ -0.18
USP47-205ENST00000525257 G0S2P27469 103 aa13.9□□□□□ -0.18
USP47-205ENST00000525257 CDIP1Q9H305 208 aa13.9□□□□□ -0.18
USP47-205ENST00000525257 SCO1O75880 301 aa13.89□□□□□ -0.19
USP47-205ENST00000525257 MT-ND4LP03901 98 aa13.89□□□□□ -0.19
USP47-205ENST00000525257 ANAPC16Q96DE5 110 aa13.89□□□□□ -0.19
USP47-205ENST00000525257 IGKV2-28A0A075B6P5 120 aa13.88□□□□□ -0.19
USP47-205ENST00000525257 IGKV2D-28P01615 120 aa13.88□□□□□ -0.19
USP47-205ENST00000525257 SCGB3A1Q96QR1 104 aa13.88□□□□□ -0.19
USP47-205ENST00000525257 TINCRA0A1B0GVN0 87 aa13.87□□□□□ -0.19
USP47-205ENST00000525257 ERASQ7Z444 233 aa13.87□□□□□ -0.19
USP47-205ENST00000525257 IGKV2D-26A0A0A0MRZ7 120 aa13.86□□□□□ -0.19
USP47-205ENST00000525257 A0A1B0GVG6 124 aa13.86□□□□□ -0.19
USP47-205ENST00000525257 SPINK8P0C7L1 97 aa13.86□□□□□ -0.19
USP47-205ENST00000525257 ADCYAP1P18509 176 aa13.86□□□□□ -0.19
USP47-205ENST00000525257 TPRXLQ17RH7 258 aa13.86□□□□□ -0.19
USP47-205ENST00000525257 IGLV7-46A0A075B6I9 117 aa13.85□□□□□ -0.19
USP47-205ENST00000525257 IGLV5-45A0A087WSX0 123 aa13.85□□□□□ -0.19
USP47-205ENST00000525257 PRLHP81277 87 aa13.85□□□□□ -0.19
USP47-205ENST00000525257 KIAA1644Q3SXP7 199 aa13.84□□□□□ -0.19
USP47-205ENST00000525257 KRTAP9-6A0A140TA67 174 aa13.83□□□□□ -0.2
USP47-205ENST00000525257 FAM19A1Q7Z5A9 133 aa13.8□□□□□ -0.2
USP47-205ENST00000525257 CST9LQ9H4G1 147 aa13.8□□□□□ -0.2
USP47-205ENST00000525257 TMEM238C9JI98 176 aa13.79□□□□□ -0.2
USP47-205ENST00000525257 ATP5LO75964 103 aa13.79□□□□□ -0.2
USP47-205ENST00000525257 PFN2P35080 140 aa13.79□□□□□ -0.2
USP47-205ENST00000525257 TMEM126AQ9H061 195 aa13.78□□□□□ -0.2
USP47-205ENST00000525257 C3orf22Q8N5N4 141 aa13.76□□□□□ -0.21
USP47-205ENST00000525257 VPREB1P12018 145 aa13.75□□□□□ -0.21
USP47-205ENST00000525257 PMVKQ15126 192 aa13.75□□□□□ -0.21
USP47-205ENST00000525257 MRPL18Q9H0U6 180 aaKnown RBP13.75□□□□□ -0.21
USP47-205ENST00000525257 PPDPFQ9H3Y8 114 aa13.75□□□□□ -0.21
USP47-205ENST00000525257 H3BRM9 83 aa13.74□□□□□ -0.21
USP47-205ENST00000525257 CTAG1AP78358 180 aa13.73□□□□□ -0.21
USP47-205ENST00000525257 SND1-IT1Q9HBX3 110 aa13.73□□□□□ -0.21
USP47-205ENST00000525257 LINC01549A6NIU2 74 aa13.72□□□□□ -0.21
USP47-205ENST00000525257 M0R378 163 aa13.72□□□□□ -0.21
USP47-205ENST00000525257 PLEKHB2Q96CS7 222 aa13.72□□□□□ -0.21
USP47-205ENST00000525257 LINC01546A6NGU7 62 aa13.71□□□□□ -0.21
USP47-205ENST00000525257 CBLN2Q8IUK8 224 aa13.7□□□□□ -0.22
USP47-205ENST00000525257 ERG28Q9UKR5 140 aa13.7□□□□□ -0.22
USP47-205ENST00000525257 IGLV5-39A0A0G2JS06 123 aa13.69□□□□□ -0.22
USP47-205ENST00000525257 RAB14P61106 215 aa13.69□□□□□ -0.22
USP47-205ENST00000525257 RPL24P83731 157 aaKnown RBP13.69□□□□□ -0.22
USP47-205ENST00000525257 Q8NDZ9 215 aa13.69□□□□□ -0.22
USP47-205ENST00000525257 HIGD2AQ9BW72 106 aa13.68□□□□□ -0.22
USP47-205ENST00000525257 ZNF625Q96I27 306 aaPredicted RBP13.67□□□□□ -0.22
USP47-205ENST00000525257 IGLC3P0DOY3 106 aa13.66□□□□□ -0.22
USP47-205ENST00000525257 FA2HQ7L5A8 372 aa13.66□□□□□ -0.22
USP47-205ENST00000525257 GNB1LQ9BYB4 327 aa13.65□□□□□ -0.22
USP47-205ENST00000525257 SMCO4Q9NRQ5 59 aa13.65□□□□□ -0.22
USP47-205ENST00000525257 ZNF22P17026 224 aaPredicted RBP13.64□□□□□ -0.23
USP47-205ENST00000525257 NDUFA6P56556 154 aa13.64□□□□□ -0.23
USP47-205ENST00000525257 COX17Q14061 63 aa13.64□□□□□ -0.23
USP47-205ENST00000525257 SPAG11AQ6PDA7 123 aa13.64□□□□□ -0.23
USP47-205ENST00000525257 TRAV9-1A0A075B6T8 112 aa13.63□□□□□ -0.23
USP47-205ENST00000525257 SPRR4Q96PI1 79 aa13.62□□□□□ -0.23
USP47-205ENST00000525257 FP248Q71RG6 208 aaPredicted RBP13.61□□□□□ -0.23
USP47-205ENST00000525257 C4orf48Q5BLP8 95 aa13.59□□□□□ -0.23
USP47-205ENST00000525257 LINC00337Q8N6G1 96 aa13.59□□□□□ -0.23
USP47-205ENST00000525257 DAND5Q8N907 189 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms