RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 SH2D6Q7Z4S9 175 aa4.4□□□□□ -1.71
NUP98-213ENST00000524563 DAZ4Q86SG3 579 aaKnown RBP4.4□□□□□ -1.71
NUP98-213ENST00000524563 ATP6V0E2Q8NHE4 81 aa4.4□□□□□ -1.71
NUP98-213ENST00000524563 RAB37Q96AX2 223 aa4.4□□□□□ -1.71
NUP98-213ENST00000524563 AMELXQ99217 191 aa4.4□□□□□ -1.71
NUP98-213ENST00000524563 NAA38Q9BRA0 125 aaKnown RBP4.4□□□□□ -1.71
NUP98-213ENST00000524563 CHCHD7Q9BUK0 85 aa4.4□□□□□ -1.71
NUP98-213ENST00000524563 GTSF1LQ9H1H1 148 aa4.4□□□□□ -1.71
NUP98-213ENST00000524563 DAZ3Q9NR90 486 aaKnown RBP4.4□□□□□ -1.71
NUP98-213ENST00000524563 NHP2Q9NX24 153 aaKnown RBP4.4□□□□□ -1.71
NUP98-213ENST00000524563 PRO0461Q9UI25 63 aa4.4□□□□□ -1.71
NUP98-213ENST00000524563 ZNF815PA8K554 130 aa4.39□□□□□ -1.71
NUP98-213ENST00000524563 LGALS3P17931 250 aaKnown RBP4.39□□□□□ -1.71
NUP98-213ENST00000524563 RNF151Q2KHN1 245 aa4.39□□□□□ -1.71
NUP98-213ENST00000524563 LELP1Q5T871 98 aa4.39□□□□□ -1.71
NUP98-213ENST00000524563 SCGB1D4Q6XE38 83 aa4.39□□□□□ -1.71
NUP98-213ENST00000524563 Q8N3U1 123 aa4.39□□□□□ -1.71
NUP98-213ENST00000524563 NTN5Q8WTR8 489 aaPredicted RBP4.39□□□□□ -1.71
NUP98-213ENST00000524563 OPRPNQ99935 248 aaPredicted RBP4.39□□□□□ -1.71
NUP98-213ENST00000524563 VPS25Q9BRG1 176 aa4.39□□□□□ -1.71
NUP98-213ENST00000524563 UBE2D4Q9Y2X8 147 aa4.39□□□□□ -1.71
NUP98-213ENST00000524563 A0A0J9YXV3 536 aa4.38□□□□□ -1.71
NUP98-213ENST00000524563 IGHV3-30P01768 117 aa4.38□□□□□ -1.71
NUP98-213ENST00000524563 IGHV3-33P01772 117 aa4.38□□□□□ -1.71
NUP98-213ENST00000524563 PLA2G1BP04054 148 aaKnown RBP4.38□□□□□ -1.71
NUP98-213ENST00000524563 IGHV3-30-3P0DP02 117 aa4.38□□□□□ -1.71
NUP98-213ENST00000524563 IGHV3-30-5P0DP03 117 aa4.38□□□□□ -1.71
NUP98-213ENST00000524563 XGP55808 180 aa4.38□□□□□ -1.71
NUP98-213ENST00000524563 Q6ZUT4 128 aa4.38□□□□□ -1.71
NUP98-213ENST00000524563 TMEM101Q96IK0 257 aa4.38□□□□□ -1.71
NUP98-213ENST00000524563 HIST1H4GQ99525 98 aa4.38□□□□□ -1.71
NUP98-213ENST00000524563 TMEM243Q9BU79 118 aa4.38□□□□□ -1.71
NUP98-213ENST00000524563 TIMM21Q9BVV7 248 aa4.38□□□□□ -1.71
NUP98-213ENST00000524563 LEPROTO15243 131 aa4.37□□□□□ -1.71
NUP98-213ENST00000524563 ZNF22P17026 224 aaPredicted RBP4.37□□□□□ -1.71
NUP98-213ENST00000524563 TSPEAR-AS2P59090 65 aa4.37□□□□□ -1.71
NUP98-213ENST00000524563 MRPS36P82909 103 aaKnown RBP4.37□□□□□ -1.71
NUP98-213ENST00000524563 RNASE13Q5GAN3 156 aaKnown RBP4.37□□□□□ -1.71
NUP98-213ENST00000524563 LINC01556Q5JQF7 62 aa4.37□□□□□ -1.71
NUP98-213ENST00000524563 PLEKHB2Q96CS7 222 aa4.37□□□□□ -1.71
NUP98-213ENST00000524563 GEMIN7Q9H840 131 aaKnown RBP4.37□□□□□ -1.71
NUP98-213ENST00000524563 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.36□□□□□ -1.71
NUP98-213ENST00000524563 IGHV3-64A0A075B6Q5 118 aa4.36□□□□□ -1.71
NUP98-213ENST00000524563 TINCRA0A1B0GVN0 87 aa4.36□□□□□ -1.71
NUP98-213ENST00000524563 TMEM223A0PJW6 202 aa4.36□□□□□ -1.71
NUP98-213ENST00000524563 H7C423 109 aa4.36□□□□□ -1.71
NUP98-213ENST00000524563 J3QQQ9 107 aa4.36□□□□□ -1.71
NUP98-213ENST00000524563 M0QXV9 152 aa4.36□□□□□ -1.71
NUP98-213ENST00000524563 SCGB1A1P11684 91 aa4.36□□□□□ -1.71
NUP98-213ENST00000524563 SRSF9Q13242 221 aaKnown RBP eCLIP4.36□□□□□ -1.71
NUP98-213ENST00000524563 Q8N814 137 aa4.36□□□□□ -1.71
NUP98-213ENST00000524563 FAM104AQ969W3 186 aa4.36□□□□□ -1.71
NUP98-213ENST00000524563 LINC01600Q96MT4 127 aa4.36□□□□□ -1.71
NUP98-213ENST00000524563 TRBV6-8A0A0A6YYG3 113 aa4.35□□□□□ -1.71
NUP98-213ENST00000524563 IBA57-AS1B1ANH7 110 aa4.35□□□□□ -1.71
NUP98-213ENST00000524563 LECT2O14960 151 aa4.35□□□□□ -1.71
NUP98-213ENST00000524563 TSPAN13O95857 204 aa4.35□□□□□ -1.71
NUP98-213ENST00000524563 HERVK_113P63121 156 aa4.35□□□□□ -1.71
NUP98-213ENST00000524563 WFDC2Q14508 124 aa4.35□□□□□ -1.71
NUP98-213ENST00000524563 LYRM7Q5U5X0 104 aa4.35□□□□□ -1.71
NUP98-213ENST00000524563 NTM-AS1Q6ZSK4 140 aa4.35□□□□□ -1.71
NUP98-213ENST00000524563 CHCHD5Q9BSY4 110 aa4.35□□□□□ -1.71
NUP98-213ENST00000524563 CSDC2Q9Y534 153 aaKnown RBP4.35□□□□□ -1.71
NUP98-213ENST00000524563 TRBV20-1A0A075B6N2 111 aa4.34□□□□□ -1.71
NUP98-213ENST00000524563 A0A0B4J2C4 111 aa4.34□□□□□ -1.71
NUP98-213ENST00000524563 H3BMG7 143 aa4.34□□□□□ -1.71
NUP98-213ENST00000524563 GAGE6Q13070 117 aa4.34□□□□□ -1.71
NUP98-213ENST00000524563 RMI2Q96E14 147 aa4.34□□□□□ -1.71
NUP98-213ENST00000524563 HERC1Q15751 4861 aa4.33□□□□□ -1.72
NUP98-213ENST00000524563 TRAV13-1A0A0B4J241 112 aa4.33□□□□□ -1.72
NUP98-213ENST00000524563 IGHV1-58A0A0C4DH39 117 aa4.33□□□□□ -1.72
NUP98-213ENST00000524563 TMEM238C9JI98 176 aa4.33□□□□□ -1.72
NUP98-213ENST00000524563 J3QR89 54 aa4.33□□□□□ -1.72
NUP98-213ENST00000524563 SPINK8P0C7L1 97 aa4.33□□□□□ -1.72
NUP98-213ENST00000524563 CFC1BP0CG36 223 aa4.33□□□□□ -1.72
NUP98-213ENST00000524563 CFC1P0CG37 223 aa4.33□□□□□ -1.72
NUP98-213ENST00000524563 IGKV2D-24A0A075B6R9 120 aa4.32□□□□□ -1.72
NUP98-213ENST00000524563 IGLV5-45A0A087WSX0 123 aa4.32□□□□□ -1.72
NUP98-213ENST00000524563 TRAV8-3A0A0A6YYJ7 113 aa4.32□□□□□ -1.72
NUP98-213ENST00000524563 IGKV3OR2-268A0A0C4DH90 116 aa4.32□□□□□ -1.72
NUP98-213ENST00000524563 TMEM262E9PQX1 116 aa4.32□□□□□ -1.72
NUP98-213ENST00000524563 RPL24P83731 157 aaKnown RBP4.32□□□□□ -1.72
NUP98-213ENST00000524563 FAM19A3Q7Z5A8 133 aa4.32□□□□□ -1.72
NUP98-213ENST00000524563 LITAFQ99732 161 aa4.32□□□□□ -1.72
NUP98-213ENST00000524563 SPANXDQ9BXN6 97 aa4.32□□□□□ -1.72
NUP98-213ENST00000524563 CDC42SE2Q9NRR3 84 aa4.32□□□□□ -1.72
NUP98-213ENST00000524563 SPANXCQ9NY87 97 aa4.32□□□□□ -1.72
NUP98-213ENST00000524563 NDUFA12Q9UI09 145 aa4.32□□□□□ -1.72
NUP98-213ENST00000524563 KLK12Q9UKR0 248 aa4.32□□□□□ -1.72
NUP98-213ENST00000524563 VPS13BQ7Z7G8 4022 aa4.31□□□□□ -1.72
NUP98-213ENST00000524563 A0A0J9YXY3 114 aa4.31□□□□□ -1.72
NUP98-213ENST00000524563 LRCOL1A6NCL2 159 aa4.31□□□□□ -1.72
NUP98-213ENST00000524563 GAGE12HA6NDE8 117 aa4.31□□□□□ -1.72
NUP98-213ENST00000524563 TIMM17BO60830 172 aa4.31□□□□□ -1.72
NUP98-213ENST00000524563 CRPP02741 224 aa4.31□□□□□ -1.72
NUP98-213ENST00000524563 FOXI1Q12951 378 aa4.31□□□□□ -1.72
NUP98-213ENST00000524563 ETDBQ3ZM63 59 aa4.31□□□□□ -1.72
NUP98-213ENST00000524563 LINC00242Q5T6M2 205 aa4.31□□□□□ -1.72
NUP98-213ENST00000524563 UBE2WQ96B02 151 aa4.31□□□□□ -1.72
NUP98-213ENST00000524563 FAM30AQ9NZY2 134 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms