RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 TAX1BP3O14907 124 aa10.01□□□□□ -0.81
CSGALNACT1-211ENST00000522854 GCSHP23434 173 aa10.01□□□□□ -0.81
CSGALNACT1-211ENST00000522854 HIST1H4GQ99525 98 aa10.01□□□□□ -0.81
CSGALNACT1-211ENST00000522854 LITAFQ99732 161 aa10.01□□□□□ -0.81
CSGALNACT1-211ENST00000522854 PRSS2P07478 247 aa10□□□□□ -0.81
CSGALNACT1-211ENST00000522854 UBE2V1Q13404 147 aa10□□□□□ -0.81
CSGALNACT1-211ENST00000522854 LECT2O14960 151 aa9.99□□□□□ -0.81
CSGALNACT1-211ENST00000522854 PTTG1IPP53801 180 aa9.99□□□□□ -0.81
CSGALNACT1-211ENST00000522854 SPAG11BQ08648 103 aa9.99□□□□□ -0.81
CSGALNACT1-211ENST00000522854 Q8IZM0 81 aa9.99□□□□□ -0.81
CSGALNACT1-211ENST00000522854 C15orf56Q8N910 161 aa9.99□□□□□ -0.81
CSGALNACT1-211ENST00000522854 EIF4EBP3O60516 100 aaPredicted RBP9.99□□□□□ -0.81
CSGALNACT1-211ENST00000522854 FXYD2P54710 66 aa9.99□□□□□ -0.81
CSGALNACT1-211ENST00000522854 SRSF9Q13242 221 aaKnown RBP eCLIP9.99□□□□□ -0.81
CSGALNACT1-211ENST00000522854 VAMP3Q15836 100 aa9.99□□□□□ -0.81
CSGALNACT1-211ENST00000522854 C10orf25Q5T742 122 aa9.99□□□□□ -0.81
CSGALNACT1-211ENST00000522854 C9orf116Q5BN46 136 aaPredicted RBP9.98□□□□□ -0.81
CSGALNACT1-211ENST00000522854 SMIM13P0DJ93 91 aa9.97□□□□□ -0.81
CSGALNACT1-211ENST00000522854 MEIG1Q5JSS6 88 aa9.97□□□□□ -0.81
CSGALNACT1-211ENST00000522854 LINC01561Q8N1V8 128 aa9.97□□□□□ -0.81
CSGALNACT1-211ENST00000522854 NBDYA0A0U1RRE5 68 aa9.97□□□□□ -0.81
CSGALNACT1-211ENST00000522854 CKS1BP61024 79 aa9.97□□□□□ -0.81
CSGALNACT1-211ENST00000522854 CFAP161Q6P656 301 aa9.97□□□□□ -0.81
CSGALNACT1-211ENST00000522854 UNQ6190/PRO20217Q6UXQ8 127 aa9.97□□□□□ -0.81
CSGALNACT1-211ENST00000522854 Q6ZVH6 145 aa9.97□□□□□ -0.81
CSGALNACT1-211ENST00000522854 CEND1Q8N111 149 aa9.97□□□□□ -0.81
CSGALNACT1-211ENST00000522854 APOMO95445 188 aa9.96□□□□□ -0.81
CSGALNACT1-211ENST00000522854 PFN2P35080 140 aa9.96□□□□□ -0.81
CSGALNACT1-211ENST00000522854 TAL2Q16559 108 aa9.95□□□□□ -0.82
CSGALNACT1-211ENST00000522854 LY6G6CO95867 125 aa9.95□□□□□ -0.82
CSGALNACT1-211ENST00000522854 WFDC2Q14508 124 aa9.95□□□□□ -0.82
CSGALNACT1-211ENST00000522854 TMEM238C9JI98 176 aa9.94□□□□□ -0.82
CSGALNACT1-211ENST00000522854 MUSTN1Q8IVN3 82 aa9.94□□□□□ -0.82
CSGALNACT1-211ENST00000522854 SPANXB1Q9NS25 103 aaPredicted RBP9.94□□□□□ -0.82
CSGALNACT1-211ENST00000522854 K7ERJ3 54 aa9.94□□□□□ -0.82
CSGALNACT1-211ENST00000522854 ALMS1Q8TCU4 4167 aa9.93□□□□□ -0.82
CSGALNACT1-211ENST00000522854 C9orf118A6NHY6 69 aa9.93□□□□□ -0.82
CSGALNACT1-211ENST00000522854 USP17L23D6RBM5 183 aa9.93□□□□□ -0.82
CSGALNACT1-211ENST00000522854 ZNF561-AS1K7EIQ3 104 aa9.93□□□□□ -0.82
CSGALNACT1-211ENST00000522854 HERV-K104P63124 156 aa9.93□□□□□ -0.82
CSGALNACT1-211ENST00000522854 SACSQ9NZJ4 4579 aa9.93□□□□□ -0.82
CSGALNACT1-211ENST00000522854 LINC00158P58513 81 aa9.92□□□□□ -0.82
CSGALNACT1-211ENST00000522854 NTN5Q8WTR8 489 aaPredicted RBP9.92□□□□□ -0.82
CSGALNACT1-211ENST00000522854 TM2D2Q9BX73 214 aa9.92□□□□□ -0.82
CSGALNACT1-211ENST00000522854 SOSTDC1Q6X4U4 206 aa9.92□□□□□ -0.82
CSGALNACT1-211ENST00000522854 ERG28Q9UKR5 140 aa9.92□□□□□ -0.82
CSGALNACT1-211ENST00000522854 MIR7-3HGQ8N6C7 128 aa9.91□□□□□ -0.82
CSGALNACT1-211ENST00000522854 RMI2Q96E14 147 aa9.91□□□□□ -0.82
CSGALNACT1-211ENST00000522854 NHP2Q9NX24 153 aaKnown RBP9.91□□□□□ -0.82
CSGALNACT1-211ENST00000522854 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
CSGALNACT1-211ENST00000522854 C6orf48Q9UBA6 75 aa9.9□□□□□ -0.82
CSGALNACT1-211ENST00000522854 PSCAO43653 123 aa9.9□□□□□ -0.83
CSGALNACT1-211ENST00000522854 SLPIP03973 132 aa9.9□□□□□ -0.83
CSGALNACT1-211ENST00000522854 Q6ZRU5 148 aa9.9□□□□□ -0.83
CSGALNACT1-211ENST00000522854 CAMK2N2Q96S95 79 aa9.9□□□□□ -0.83
CSGALNACT1-211ENST00000522854 SPANXDQ9BXN6 97 aa9.9□□□□□ -0.83
CSGALNACT1-211ENST00000522854 SPANXCQ9NY87 97 aa9.9□□□□□ -0.83
CSGALNACT1-211ENST00000522854 GVQW2A0A096LPI5 108 aaPredicted RBP9.89□□□□□ -0.83
CSGALNACT1-211ENST00000522854 TIMM17BO60830 172 aa9.89□□□□□ -0.83
CSGALNACT1-211ENST00000522854 LINC00476Q8WZB0 136 aa9.89□□□□□ -0.83
CSGALNACT1-211ENST00000522854 A4D1N5 150 aa9.88□□□□□ -0.83
CSGALNACT1-211ENST00000522854 CXCL5P42830 114 aa9.88□□□□□ -0.83
CSGALNACT1-211ENST00000522854 TTC32Q5I0X7 151 aa9.88□□□□□ -0.83
CSGALNACT1-211ENST00000522854 GTF2H5Q6ZYL4 71 aa9.88□□□□□ -0.83
CSGALNACT1-211ENST00000522854 LINC00308Q8TCZ7 52 aa9.88□□□□□ -0.83
CSGALNACT1-211ENST00000522854 RAB37Q96AX2 223 aa9.88□□□□□ -0.83
CSGALNACT1-211ENST00000522854 DNAH6Q9C0G6 4158 aa9.88□□□□□ -0.83
CSGALNACT1-211ENST00000522854 C3orf84H3BNL1 204 aa9.87□□□□□ -0.83
CSGALNACT1-211ENST00000522854 NAA38Q9BRA0 125 aaKnown RBP9.87□□□□□ -0.83
CSGALNACT1-211ENST00000522854 DNAH17Q9UFH2 4485 aa9.87□□□□□ -0.83
CSGALNACT1-211ENST00000522854 Q6ZRN7 208 aaPredicted RBP9.86□□□□□ -0.83
CSGALNACT1-211ENST00000522854 GAGE10A6NGK3 116 aa9.86□□□□□ -0.83
CSGALNACT1-211ENST00000522854 H3BUT2 72 aa9.86□□□□□ -0.83
CSGALNACT1-211ENST00000522854 FRAS1Q86XX4 4008 aa9.85□□□□□ -0.83
CSGALNACT1-211ENST00000522854 SFTA2Q6UW10 78 aa9.85□□□□□ -0.83
CSGALNACT1-211ENST00000522854 Q6ZR54 194 aa9.85□□□□□ -0.83
CSGALNACT1-211ENST00000522854 CFC1BP0CG36 223 aa9.84□□□□□ -0.83
CSGALNACT1-211ENST00000522854 CFC1P0CG37 223 aa9.84□□□□□ -0.83
CSGALNACT1-211ENST00000522854 FABP2P12104 132 aa9.84□□□□□ -0.83
CSGALNACT1-211ENST00000522854 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.83□□□□□ -0.84
CSGALNACT1-211ENST00000522854 A0A1W2PPM0 123 aa9.83□□□□□ -0.84
CSGALNACT1-211ENST00000522854 RPL24P83731 157 aaKnown RBP9.83□□□□□ -0.84
CSGALNACT1-211ENST00000522854 SYCNQ0VAF6 134 aa9.83□□□□□ -0.84
CSGALNACT1-211ENST00000522854 C2orf48Q96LS8 159 aa9.83□□□□□ -0.84
CSGALNACT1-211ENST00000522854 KMT2CQ8NEZ4 4911 aaKnown RBP9.83□□□□□ -0.84
CSGALNACT1-211ENST00000522854 TMEM238LA0A1B0GVL6 79 aa9.82□□□□□ -0.84
CSGALNACT1-211ENST00000522854 A6NJY4 79 aa9.82□□□□□ -0.84
CSGALNACT1-211ENST00000522854 K7EP34 96 aa9.82□□□□□ -0.84
CSGALNACT1-211ENST00000522854 SND1-IT1Q9HBX3 110 aa9.82□□□□□ -0.84
CSGALNACT1-211ENST00000522854 XAGE1AQ9HD64 81 aa9.82□□□□□ -0.84
CSGALNACT1-211ENST00000522854 HECTD4Q9Y4D8 3996 aa9.81□□□□□ -0.84
CSGALNACT1-211ENST00000522854 LRCOL1A6NCL2 159 aa9.81□□□□□ -0.84
CSGALNACT1-211ENST00000522854 FUSP35637 526 aaKnown RBP eCLIP9.81□□□□□ -0.84
CSGALNACT1-211ENST00000522854 Q8NDZ9 215 aa9.81□□□□□ -0.84
CSGALNACT1-211ENST00000522854 IFITM1P13164 125 aa9.81□□□□□ -0.84
CSGALNACT1-211ENST00000522854 PRR3P79522 188 aaKnown RBP9.81□□□□□ -0.84
CSGALNACT1-211ENST00000522854 CARD19Q96LW7 228 aa9.81□□□□□ -0.84
CSGALNACT1-211ENST00000522854 TRBV30A0A0K0K1B3 111 aa9.8□□□□□ -0.84
CSGALNACT1-211ENST00000522854 COX17Q14061 63 aa9.8□□□□□ -0.84
CSGALNACT1-211ENST00000522854 GAGE2EQ4V326 116 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms