RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 C6orf201Q7Z4U5 140 aa0.62□□□□□ -2.31
PTPN12-214ENST00000520947 MYO3AQ8NEV4 1616 aa0.62□□□□□ -2.31
PTPN12-214ENST00000520947 CACNA1CQ13936 2221 aa0.62□□□□□ -2.31
PTPN12-214ENST00000520947 CUX1P39880 1505 aa0.62□□□□□ -2.31
PTPN12-214ENST00000520947 F8P00451 2351 aa0.61□□□□□ -2.31
PTPN12-214ENST00000520947 NHSL1Q5SYE7 1610 aa0.61□□□□□ -2.31
PTPN12-214ENST00000520947 F8WEM9 126 aa0.61□□□□□ -2.31
PTPN12-214ENST00000520947 C9orf62Q8N4C0 152 aa0.61□□□□□ -2.31
PTPN12-214ENST00000520947 TARBP1Q13395 1621 aaKnown RBP0.6□□□□□ -2.31
PTPN12-214ENST00000520947 SHPRHQ149N8 1683 aa0.6□□□□□ -2.31
PTPN12-214ENST00000520947 ZFYVE26Q68DK2 2539 aa0.6□□□□□ -2.31
PTPN12-214ENST00000520947 A0A1B0GU69 56 aa0.6□□□□□ -2.31
PTPN12-214ENST00000520947 K7EP34 96 aa0.6□□□□□ -2.31
PTPN12-214ENST00000520947 GNGT1P63211 74 aa0.6□□□□□ -2.31
PTPN12-214ENST00000520947 DEFB107AQ8IZN7 70 aa0.6□□□□□ -2.31
PTPN12-214ENST00000520947 HIGD1BQ9P298 99 aa0.6□□□□□ -2.31
PTPN12-214ENST00000520947 CCDC141Q6ZP82 1450 aa0.6□□□□□ -2.31
PTPN12-214ENST00000520947 MYO7BQ6PIF6 2116 aa0.59□□□□□ -2.31
PTPN12-214ENST00000520947 FXYD6-FXYD2A0A087WZ82 144 aa0.59□□□□□ -2.31
PTPN12-214ENST00000520947 SPINK1P00995 79 aa0.59□□□□□ -2.31
PTPN12-214ENST00000520947 WFDC2Q14508 124 aa0.59□□□□□ -2.31
PTPN12-214ENST00000520947 PEA15Q15121 130 aa0.59□□□□□ -2.31
PTPN12-214ENST00000520947 PSENENQ9NZ42 101 aa0.59□□□□□ -2.31
PTPN12-214ENST00000520947 PLIN4Q96Q06 1357 aa0.58□□□□□ -2.32
PTPN12-214ENST00000520947 KIAA1551Q9HCM1 1747 aa0.58□□□□□ -2.32
PTPN12-214ENST00000520947 CHD9Q3L8U1 2897 aa0.58□□□□□ -2.32
PTPN12-214ENST00000520947 D6R8Y8 96 aa0.58□□□□□ -2.32
PTPN12-214ENST00000520947 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
PTPN12-214ENST00000520947 Q5VSD8 79 aa0.58□□□□□ -2.32
PTPN12-214ENST00000520947 MUSTN1Q8IVN3 82 aa0.58□□□□□ -2.32
PTPN12-214ENST00000520947 C2CD3Q4AC94 2353 aa0.57□□□□□ -2.32
PTPN12-214ENST00000520947 LEPROTL1O95214 131 aa0.57□□□□□ -2.32
PTPN12-214ENST00000520947 HMGN2P05204 90 aaKnown RBP0.57□□□□□ -2.32
PTPN12-214ENST00000520947 PIEZO2Q9H5I5 2752 aa0.57□□□□□ -2.32
PTPN12-214ENST00000520947 KNDC1Q76NI1 1749 aa0.57□□□□□ -2.32
PTPN12-214ENST00000520947 SAMD9Q5K651 1589 aa0.57□□□□□ -2.32
PTPN12-214ENST00000520947 KIAA0556O60303 1618 aa0.56□□□□□ -2.32
PTPN12-214ENST00000520947 COX6B1P14854 86 aa0.56□□□□□ -2.32
PTPN12-214ENST00000520947 S100A16Q96FQ6 103 aaKnown RBP0.56□□□□□ -2.32
PTPN12-214ENST00000520947 RABAC1Q9UI14 185 aa0.56□□□□□ -2.32
PTPN12-214ENST00000520947 CELSR2Q9HCU4 2923 aa0.56□□□□□ -2.32
PTPN12-214ENST00000520947 UACAQ9BZF9 1416 aa0.55□□□□□ -2.32
PTPN12-214ENST00000520947 ANK2Q01484 3957 aa0.55□□□□□ -2.32
PTPN12-214ENST00000520947 GOLGA4Q13439 2230 aaKnown RBP0.55□□□□□ -2.32
PTPN12-214ENST00000520947 CYB5AP00167 134 aa0.55□□□□□ -2.32
PTPN12-214ENST00000520947 CFDP00746 253 aaPredicted RBP0.55□□□□□ -2.32
PTPN12-214ENST00000520947 USMG5Q96IX5 58 aa0.55□□□□□ -2.32
PTPN12-214ENST00000520947 UBE2D4Q9Y2X8 147 aa0.55□□□□□ -2.32
PTPN12-214ENST00000520947 C5P01031 1676 aa0.55□□□□□ -2.32
PTPN12-214ENST00000520947 MUC5BQ9HC84 5762 aaPredicted RBP0.55□□□□□ -2.32
PTPN12-214ENST00000520947 USP24Q9UPU5 2620 aa0.54□□□□□ -2.32
PTPN12-214ENST00000520947 ZNF292O60281 2723 aa0.54□□□□□ -2.32
PTPN12-214ENST00000520947 PAPPA2Q9BXP8 1791 aa0.54□□□□□ -2.32
PTPN12-214ENST00000520947 AHNAKQ09666 5890 aaKnown RBP0.54□□□□□ -2.32
PTPN12-214ENST00000520947 MED14O60244 1454 aa0.54□□□□□ -2.32
PTPN12-214ENST00000520947 TNCP24821 2201 aa0.53□□□□□ -2.32
PTPN12-214ENST00000520947 K7EQZ3 153 aa0.53□□□□□ -2.32
PTPN12-214ENST00000520947 NMSQ5H8A3 153 aa0.53□□□□□ -2.32
PTPN12-214ENST00000520947 NAV2Q8IVL1 2488 aa0.53□□□□□ -2.33
PTPN12-214ENST00000520947 LRRC37AA6NMS7 1700 aa0.52□□□□□ -2.33
PTPN12-214ENST00000520947 COX8AP10176 69 aa0.52□□□□□ -2.33
PTPN12-214ENST00000520947 SNRPFP62306 86 aaKnown RBP0.52□□□□□ -2.33
PTPN12-214ENST00000520947 KIF14Q15058 1648 aa0.52□□□□□ -2.33
PTPN12-214ENST00000520947 ALKQ9UM73 1620 aa0.52□□□□□ -2.33
PTPN12-214ENST00000520947 MAP3K4Q9Y6R4 1608 aa0.52□□□□□ -2.33
PTPN12-214ENST00000520947 SCRIBQ14160 1630 aa0.51□□□□□ -2.33
PTPN12-214ENST00000520947 DEFB109BQ30KR1 87 aa0.51□□□□□ -2.33
PTPN12-214ENST00000520947 NEXMIFQ5QGS0 1516 aa0.51□□□□□ -2.33
PTPN12-214ENST00000520947 CCDC18Q5T9S5 1454 aa0.51□□□□□ -2.33
PTPN12-214ENST00000520947 RGPD4Q7Z3J3 1758 aa0.51□□□□□ -2.33
PTPN12-214ENST00000520947 PTPRZ1P23471 2315 aaPredicted RBP0.5□□□□□ -2.33
PTPN12-214ENST00000520947 CRYBG1Q9Y4K1 1723 aa0.5□□□□□ -2.33
PTPN12-214ENST00000520947 PPRC1Q5VV67 1664 aaKnown RBP0.5□□□□□ -2.33
PTPN12-214ENST00000520947 SLIT1O75093 1534 aa0.5□□□□□ -2.33
PTPN12-214ENST00000520947 ATP7BP35670 1465 aa0.5□□□□□ -2.33
PTPN12-214ENST00000520947 LRRC9Q6ZRR7 1453 aa0.5□□□□□ -2.33
PTPN12-214ENST00000520947 MAGI2Q86UL8 1455 aa0.5□□□□□ -2.33
PTPN12-214ENST00000520947 IGLC2P0DOY2 106 aa0.5□□□□□ -2.33
PTPN12-214ENST00000520947 IGLC3P0DOY3 106 aa0.5□□□□□ -2.33
PTPN12-214ENST00000520947 PLGLAQ15195 96 aa0.5□□□□□ -2.33
PTPN12-214ENST00000520947 DNAJC13O75165 2243 aa0.49□□□□□ -2.33
PTPN12-214ENST00000520947 UNC79Q9P2D8 2635 aa0.49□□□□□ -2.33
PTPN12-214ENST00000520947 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
PTPN12-214ENST00000520947 SPRR1AP35321 89 aa0.49□□□□□ -2.33
PTPN12-214ENST00000520947 LINC00643Q86TS7 51 aa0.49□□□□□ -2.33
PTPN12-214ENST00000520947 U3KQA8 63 aa0.49□□□□□ -2.33
PTPN12-214ENST00000520947 PLCE1Q9P212 2302 aa0.48□□□□□ -2.33
PTPN12-214ENST00000520947 UBR1Q8IWV7 1749 aa0.48□□□□□ -2.33
PTPN12-214ENST00000520947 ACYP1P07311 99 aa0.48□□□□□ -2.33
PTPN12-214ENST00000520947 RGPD3A6NKT7 1758 aaPredicted RBP0.47□□□□□ -2.33
PTPN12-214ENST00000520947 MYMXA0A1B0GTQ4 84 aa0.47□□□□□ -2.33
PTPN12-214ENST00000520947 IQCF6A8MYZ5 107 aa0.47□□□□□ -2.33
PTPN12-214ENST00000520947 SPRR1BP22528 89 aa0.47□□□□□ -2.33
PTPN12-214ENST00000520947 CRIPTQ9P021 101 aa0.47□□□□□ -2.33
PTPN12-214ENST00000520947 PPLO60437 1756 aa0.47□□□□□ -2.33
PTPN12-214ENST00000520947 NKTRP30414 1462 aaKnown RBP0.47□□□□□ -2.33
PTPN12-214ENST00000520947 AKAP6Q13023 2319 aa0.47□□□□□ -2.33
PTPN12-214ENST00000520947 A0A1B0GUT8 65 aa0.46□□□□□ -2.34
PTPN12-214ENST00000520947 IGF2RP11717 2491 aa0.45□□□□□ -2.34
PTPN12-214ENST00000520947 SPTBN1Q01082 2364 aaKnown RBP0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms