RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 LECT2O14960 151 aa7.11□□□□□ -1.27
MCF2-209ENST00000520602 IGLV5-39A0A0G2JS06 123 aa7.11□□□□□ -1.27
MCF2-209ENST00000520602 HIGD2BQ4VC39 106 aa7.11□□□□□ -1.27
MCF2-209ENST00000520602 C15orf53Q8NAA6 179 aa7.11□□□□□ -1.27
MCF2-209ENST00000520602 A0A087WZ39 114 aa7.11□□□□□ -1.27
MCF2-209ENST00000520602 CAMK2N2Q96S95 79 aa7.11□□□□□ -1.27
MCF2-209ENST00000520602 C1orf43Q9BWL3 253 aa7.11□□□□□ -1.27
MCF2-209ENST00000520602 H3BT86 120 aa7.1□□□□□ -1.27
MCF2-209ENST00000520602 CCL18P55774 89 aa7.1□□□□□ -1.27
MCF2-209ENST00000520602 ANAPC13Q9BS18 74 aa7.1□□□□□ -1.27
MCF2-209ENST00000520602 CD164L2Q6UWJ8 174 aa7.1□□□□□ -1.27
MCF2-209ENST00000520602 C11orf45Q8TAV5 145 aa7.1□□□□□ -1.27
MCF2-209ENST00000520602 IGLV5-45A0A087WSX0 123 aa7.1□□□□□ -1.27
MCF2-209ENST00000520602 EIF4EBP3O60516 100 aaPredicted RBP7.1□□□□□ -1.27
MCF2-209ENST00000520602 KPRPQ5T749 579 aaPredicted RBP7.1□□□□□ -1.27
MCF2-209ENST00000520602 IL17DQ8TAD2 202 aa7.1□□□□□ -1.27
MCF2-209ENST00000520602 LAMTOR3Q9UHA4 124 aa7.1□□□□□ -1.27
MCF2-209ENST00000520602 NOTCH1P46531 2555 aa7.1□□□□□ -1.27
MCF2-209ENST00000520602 C9orf116Q5BN46 136 aaPredicted RBP7.09□□□□□ -1.27
MCF2-209ENST00000520602 Q8N3U1 123 aa7.09□□□□□ -1.27
MCF2-209ENST00000520602 IGHV3OR16-9A0A0B4J2B5 98 aa7.09□□□□□ -1.27
MCF2-209ENST00000520602 SMCPP49901 116 aaPredicted RBP7.09□□□□□ -1.27
MCF2-209ENST00000520602 DEFB131BA0A096LNP1 70 aa7.09□□□□□ -1.27
MCF2-209ENST00000520602 RNF183Q96D59 192 aa7.09□□□□□ -1.27
MCF2-209ENST00000520602 CUBNO60494 3623 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 LST1O00453 97 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 MT-ATP8P03928 68 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 SHISA2Q6UWI4 295 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 LITAFQ99732 161 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 STAB1Q9NY15 2570 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 H0YGX0 51 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 LELP1Q5T871 98 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 SBSPONQ8IVN8 264 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 INAFM2P0DMQ5 153 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 CXCL5P42830 114 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 PRR3P79522 188 aaKnown RBP7.08□□□□□ -1.28
MCF2-209ENST00000520602 XAGE1AQ9HD64 81 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 PRO0461Q9UI25 63 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 COL6A5A8TX70 2615 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 SLPIP03973 132 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 SOSTDC1Q6X4U4 206 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 FAM104AQ969W3 186 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 CITED1Q99966 193 aa7.08□□□□□ -1.28
MCF2-209ENST00000520602 HIVEP1P15822 2718 aa7.07□□□□□ -1.28
MCF2-209ENST00000520602 NANOS2P60321 138 aaKnown RBP7.07□□□□□ -1.28
MCF2-209ENST00000520602 RPL18AQ02543 176 aaKnown RBP7.07□□□□□ -1.28
MCF2-209ENST00000520602 Q6ZTC4 211 aa7.07□□□□□ -1.28
MCF2-209ENST00000520602 SMIM11BQ8TCY0 68 aa7.07□□□□□ -1.28
MCF2-209ENST00000520602 TENM4Q6N022 2769 aa7.06□□□□□ -1.28
MCF2-209ENST00000520602 A0A0J9YWU9 116 aa7.06□□□□□ -1.28
MCF2-209ENST00000520602 A0A1B0GUV1 79 aa7.06□□□□□ -1.28
MCF2-209ENST00000520602 UBE2DNLQ8IWF7 75 aa7.06□□□□□ -1.28
MCF2-209ENST00000520602 DPH3Q96FX2 82 aa7.06□□□□□ -1.28
MCF2-209ENST00000520602 UNQ6190/PRO20217Q6UXQ8 127 aa7.06□□□□□ -1.28
MCF2-209ENST00000520602 TMEM126AQ9H061 195 aa7.06□□□□□ -1.28
MCF2-209ENST00000520602 Q8IZM0 81 aa7.05□□□□□ -1.28
MCF2-209ENST00000520602 ORMDL1Q9P0S3 153 aa7.05□□□□□ -1.28
MCF2-209ENST00000520602 SCGB1A1P11684 91 aa7.05□□□□□ -1.28
MCF2-209ENST00000520602 NIPBLQ6KC79 2804 aaeCLIP7.04□□□□□ -1.28
MCF2-209ENST00000520602 KRTAP24-1Q3LI83 254 aa7.04□□□□□ -1.28
MCF2-209ENST00000520602 C6orf223Q8N319 242 aa7.04□□□□□ -1.28
MCF2-209ENST00000520602 LINC00337Q8N6G1 96 aa7.04□□□□□ -1.28
MCF2-209ENST00000520602 NSD1Q96L73 2696 aaPredicted RBP7.04□□□□□ -1.28
MCF2-209ENST00000520602 CYSRT1A8MQ03 144 aa7.03□□□□□ -1.28
MCF2-209ENST00000520602 PSCAO43653 123 aa7.03□□□□□ -1.28
MCF2-209ENST00000520602 XGP55808 180 aa7.03□□□□□ -1.28
MCF2-209ENST00000520602 Q8NAQ8 132 aa7.03□□□□□ -1.28
MCF2-209ENST00000520602 C14orf132Q9NPU4 83 aa7.03□□□□□ -1.28
MCF2-209ENST00000520602 TRACP01848 142 aa7.02□□□□□ -1.29
MCF2-209ENST00000520602 WFDC10BQ8IUB3 73 aa7.02□□□□□ -1.29
MCF2-209ENST00000520602 NKAPP1Q8N9T2 125 aa7.02□□□□□ -1.29
MCF2-209ENST00000520602 C6orf99Q4VX62 202 aa7.02□□□□□ -1.29
MCF2-209ENST00000520602 LYPD5Q6UWN5 251 aa7.02□□□□□ -1.29
MCF2-209ENST00000520602 SPATA25Q9BR10 227 aa7.02□□□□□ -1.29
MCF2-209ENST00000520602 HIST1H4AP62805 103 aaKnown RBP7.02□□□□□ -1.29
MCF2-209ENST00000520602 WFDC9Q8NEX5 89 aa7.01□□□□□ -1.29
MCF2-209ENST00000520602 VPS13CQ709C8 3753 aa7□□□□□ -1.29
MCF2-209ENST00000520602 RPL28P46779 137 aaKnown RBP6.99□□□□□ -1.29
MCF2-209ENST00000520602 A0A087WYN8 130 aa6.99□□□□□ -1.29
MCF2-209ENST00000520602 IGKV3D-7A0A0C4DH55 119 aa6.97□□□□□ -1.29
MCF2-209ENST00000520602 GHRHP01286 108 aa6.97□□□□□ -1.29
MCF2-209ENST00000520602 ACYP1P07311 99 aa6.97□□□□□ -1.29
MCF2-209ENST00000520602 DEFB105AQ8NG35 78 aa6.97□□□□□ -1.29
MCF2-209ENST00000520602 LINC00612Q8N6U2 182 aa6.97□□□□□ -1.29
MCF2-209ENST00000520602 CDIP1Q9H305 208 aa6.97□□□□□ -1.29
MCF2-209ENST00000520602 NBEAL1Q6ZS30 2694 aa6.97□□□□□ -1.29
MCF2-209ENST00000520602 C10orf25Q5T742 122 aa6.96□□□□□ -1.29
MCF2-209ENST00000520602 FAM218AQ96MZ4 157 aa6.96□□□□□ -1.29
MCF2-209ENST00000520602 COX17Q14061 63 aa6.96□□□□□ -1.3
MCF2-209ENST00000520602 DIRC1Q969H9 104 aa6.96□□□□□ -1.3
MCF2-209ENST00000520602 RMI2Q96E14 147 aa6.96□□□□□ -1.3
MCF2-209ENST00000520602 FAM19A3Q7Z5A8 133 aa6.96□□□□□ -1.3
MCF2-209ENST00000520602 KRTAP10-11P60412 298 aa6.95□□□□□ -1.3
MCF2-209ENST00000520602 IGKV2-28A0A075B6P5 120 aa6.95□□□□□ -1.3
MCF2-209ENST00000520602 IGKV2D-28P01615 120 aa6.95□□□□□ -1.3
MCF2-209ENST00000520602 HAMPP81172 84 aa6.95□□□□□ -1.3
MCF2-209ENST00000520602 DSCR8Q96T75 97 aa6.95□□□□□ -1.3
MCF2-209ENST00000520602 TRAV10A0A0B4J240 114 aa6.95□□□□□ -1.3
MCF2-209ENST00000520602 hADV29S1A0JD25 119 aa6.95□□□□□ -1.3
MCF2-209ENST00000520602 TMEM256-PLSCR3K7ERE1 68 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms