RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 WNK1Q9H4A3 2382 aa-0.06□□□□□ -2.42
SKP1-207ENST00000520417 NALCNQ8IZF0 1738 aa-0.06□□□□□ -2.42
SKP1-207ENST00000520417 LINC00959A0A1B0GUT2 108 aa-0.06□□□□□ -2.42
SKP1-207ENST00000520417 TMEM218A2RU14 115 aa-0.06□□□□□ -2.42
SKP1-207ENST00000520417 COX8AP10176 69 aa-0.06□□□□□ -2.42
SKP1-207ENST00000520417 DEFB105AQ8NG35 78 aa-0.06□□□□□ -2.42
SKP1-207ENST00000520417 LINC00846Q9NV44 126 aa-0.06□□□□□ -2.42
SKP1-207ENST00000520417 BCL9LQ86UU0 1499 aa-0.06□□□□□ -2.42
SKP1-207ENST00000520417 CREBBPQ92793 2442 aa-0.06□□□□□ -2.42
SKP1-207ENST00000520417 DNHD1Q96M86 4753 aa-0.06□□□□□ -2.42
SKP1-207ENST00000520417 TENM2Q9NT68 2774 aa-0.06□□□□□ -2.42
SKP1-207ENST00000520417 SETD2Q9BYW2 2564 aaPredicted RBP-0.06□□□□□ -2.42
SKP1-207ENST00000520417 HERC2O95714 4834 aa-0.07□□□□□ -2.42
SKP1-207ENST00000520417 HMGXB3Q12766 1538 aa-0.07□□□□□ -2.42
SKP1-207ENST00000520417 ARHGEF12Q9NZN5 1544 aa-0.07□□□□□ -2.42
SKP1-207ENST00000520417 PZPP20742 1482 aa-0.07□□□□□ -2.42
SKP1-207ENST00000520417 A0A0G2JND7 137 aa-0.07□□□□□ -2.42
SKP1-207ENST00000520417 CPSF4LA6NMK7 179 aaKnown RBP-0.07□□□□□ -2.42
SKP1-207ENST00000520417 PRM1P04553 51 aa-0.07□□□□□ -2.42
SKP1-207ENST00000520417 S100A10P60903 97 aa-0.07□□□□□ -2.42
SKP1-207ENST00000520417 KLK9Q2XQG4 91 aa-0.07□□□□□ -2.42
SKP1-207ENST00000520417 CACFD1Q9UGQ2 172 aa-0.07□□□□□ -2.42
SKP1-207ENST00000520417 APLNQ9ULZ1 77 aa-0.07□□□□□ -2.42
SKP1-207ENST00000520417 PAPPAQ13219 1627 aa-0.07□□□□□ -2.42
SKP1-207ENST00000520417 APC2O95996 2303 aa-0.07□□□□□ -2.42
SKP1-207ENST00000520417 QRICH2Q9H0J4 1663 aa-0.08□□□□□ -2.42
SKP1-207ENST00000520417 MAP1AP78559 2803 aaPredicted RBP-0.08□□□□□ -2.42
SKP1-207ENST00000520417 MYCBP2O75592 4640 aa-0.08□□□□□ -2.42
SKP1-207ENST00000520417 ACANP16112 2415 aa-0.08□□□□□ -2.42
SKP1-207ENST00000520417 A0A1B0GU69 56 aa-0.08□□□□□ -2.42
SKP1-207ENST00000520417 NDUFC1O43677 76 aa-0.08□□□□□ -2.42
SKP1-207ENST00000520417 GNGT1P63211 74 aa-0.08□□□□□ -2.42
SKP1-207ENST00000520417 PMCHL1Q16048 86 aa-0.08□□□□□ -2.42
SKP1-207ENST00000520417 TCEAL7Q9BRU2 100 aa-0.08□□□□□ -2.42
SKP1-207ENST00000520417 CRIPTQ9P021 101 aa-0.08□□□□□ -2.42
SKP1-207ENST00000520417 MAPKBP1O60336 1514 aa-0.08□□□□□ -2.42
SKP1-207ENST00000520417 ARHGAP5Q13017 1502 aa-0.08□□□□□ -2.42
SKP1-207ENST00000520417 SETBP1Q9Y6X0 1596 aa-0.09□□□□□ -2.42
SKP1-207ENST00000520417 A0A087WVE0 104 aa-0.09□□□□□ -2.42
SKP1-207ENST00000520417 ATP6V1G2-DDX39BF2Z307 99 aa-0.09□□□□□ -2.42
SKP1-207ENST00000520417 H3BQF6 201 aa-0.09□□□□□ -2.42
SKP1-207ENST00000520417 ASIPP42127 132 aa-0.09□□□□□ -2.42
SKP1-207ENST00000520417 PSMG4Q5JS54 123 aa-0.09□□□□□ -2.42
SKP1-207ENST00000520417 DEFB107AQ8IZN7 70 aa-0.09□□□□□ -2.42
SKP1-207ENST00000520417 TET3O43151 1660 aa-0.09□□□□□ -2.42
SKP1-207ENST00000520417 MYOM1P52179 1685 aa-0.09□□□□□ -2.42
SKP1-207ENST00000520417 LPAP08519 4548 aa-0.09□□□□□ -2.42
SKP1-207ENST00000520417 GAPVD1Q14C86 1478 aa-0.1□□□□□ -2.42
SKP1-207ENST00000520417 MAGI1Q96QZ7 1491 aaPredicted RBP-0.1□□□□□ -2.42
SKP1-207ENST00000520417 COL6A5A8TX70 2615 aa-0.1□□□□□ -2.42
SKP1-207ENST00000520417 TEP1Q99973 2627 aaKnown RBP-0.1□□□□□ -2.42
SKP1-207ENST00000520417 PKD1L2Q7Z442 2459 aa-0.1□□□□□ -2.43
SKP1-207ENST00000520417 CUL7Q14999 1698 aa-0.1□□□□□ -2.43
SKP1-207ENST00000520417 BIRC6Q9NR09 4857 aa-0.1□□□□□ -2.43
SKP1-207ENST00000520417 TNXBP22105 4242 aa-0.1□□□□□ -2.43
SKP1-207ENST00000520417 SPRR2DP22532 72 aa-0.1□□□□□ -2.43
SKP1-207ENST00000520417 COL5A1-AS1Q5SY13 56 aa-0.1□□□□□ -2.43
SKP1-207ENST00000520417 C14orf144Q96I85 54 aa-0.1□□□□□ -2.43
SKP1-207ENST00000520417 PMCHL2Q9BQD1 86 aa-0.1□□□□□ -2.43
SKP1-207ENST00000520417 EHBP1L1Q8N3D4 1523 aa-0.1□□□□□ -2.43
SKP1-207ENST00000520417 FASNP49327 2511 aaKnown RBP-0.1□□□□□ -2.43
SKP1-207ENST00000520417 NBEAL2Q6ZNJ1 2754 aa-0.1□□□□□ -2.43
SKP1-207ENST00000520417 ADGRL2O95490 1459 aa-0.1□□□□□ -2.43
SKP1-207ENST00000520417 C1orf167Q5SNV9 1468 aa-0.1□□□□□ -2.43
SKP1-207ENST00000520417 TSC2P49815 1807 aa-0.1□□□□□ -2.43
SKP1-207ENST00000520417 EIF4G3O43432 1585 aaKnown RBP-0.11□□□□□ -2.43
SKP1-207ENST00000520417 NRKQ7Z2Y5 1582 aa-0.11□□□□□ -2.43
SKP1-207ENST00000520417 FAT1Q14517 4588 aa-0.11□□□□□ -2.43
SKP1-207ENST00000520417 FLNBO75369 2602 aaKnown RBP-0.11□□□□□ -2.43
SKP1-207ENST00000520417 DNAJC13O75165 2243 aa-0.11□□□□□ -2.43
SKP1-207ENST00000520417 TRBV25-1A0A075B6N4 114 aa-0.11□□□□□ -2.43
SKP1-207ENST00000520417 TRAV30A0A087WSZ9 112 aa-0.11□□□□□ -2.43
SKP1-207ENST00000520417 UQCRHP07919 91 aa-0.11□□□□□ -2.43
SKP1-207ENST00000520417 C6orf201Q7Z4U5 140 aa-0.11□□□□□ -2.43
SKP1-207ENST00000520417 TRGV9Q99603 122 aa-0.11□□□□□ -2.43
SKP1-207ENST00000520417 STARD9Q9P2P6 4700 aa-0.11□□□□□ -2.43
SKP1-207ENST00000520417 LRP2P98164 4655 aa-0.11□□□□□ -2.43
SKP1-207ENST00000520417 ABCC5O15440 1437 aa-0.12□□□□□ -2.43
SKP1-207ENST00000520417 I3L3M4 83 aa-0.12□□□□□ -2.43
SKP1-207ENST00000520417 MT-ATP8P03928 68 aa-0.12□□□□□ -2.43
SKP1-207ENST00000520417 ARMS2P0C7Q2 107 aa-0.12□□□□□ -2.43
SKP1-207ENST00000520417 LINC00032P0C843 101 aa-0.12□□□□□ -2.43
SKP1-207ENST00000520417 FAUP35544 74 aaKnown RBP-0.12□□□□□ -2.43
SKP1-207ENST00000520417 RBP2P50120 134 aa-0.12□□□□□ -2.43
SKP1-207ENST00000520417 KRTAP6-1Q3LI64 71 aa-0.12□□□□□ -2.43
SKP1-207ENST00000520417 NBEAL1Q6ZS30 2694 aa-0.12□□□□□ -2.43
SKP1-207ENST00000520417 HECTD4Q9Y4D8 3996 aa-0.13□□□□□ -2.43
SKP1-207ENST00000520417 COL12A1Q99715 3063 aa-0.13□□□□□ -2.43
SKP1-207ENST00000520417 ACACBO00763 2458 aa-0.13□□□□□ -2.43
SKP1-207ENST00000520417 PDCD11Q14690 1871 aaKnown RBP-0.13□□□□□ -2.43
SKP1-207ENST00000520417 ARHGEF5Q12774 1597 aa-0.13□□□□□ -2.43
SKP1-207ENST00000520417 H0Y9P7 68 aa-0.13□□□□□ -2.43
SKP1-207ENST00000520417 ATOX1O00244 68 aa-0.13□□□□□ -2.43
SKP1-207ENST00000520417 TULP4Q9NRJ4 1543 aa-0.13□□□□□ -2.43
SKP1-207ENST00000520417 ALMS1Q8TCU4 4167 aa-0.14□□□□□ -2.43
SKP1-207ENST00000520417 CNOT1A5YKK6 2376 aaKnown RBP-0.14□□□□□ -2.43
SKP1-207ENST00000520417 MPC2O95563 127 aa-0.14□□□□□ -2.43
SKP1-207ENST00000520417 ACBD7Q8N6N7 88 aa-0.14□□□□□ -2.43
SKP1-207ENST00000520417 SERP2Q8N6R1 65 aa-0.14□□□□□ -2.43
SKP1-207ENST00000520417 DPY30Q9C005 99 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms