RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TRAV12-3A0A0B4J271 114 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 A0A1B0GWA3 101 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 ZNF815PA8K554 130 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 ODF3BA8MYP8 253 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 B4DSR2 109 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 J3QKU1 62 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 HMGN2P05204 90 aaKnown RBP1.76□□□□□ -2.13
VPS13B-207ENST00000518569 ELOF1P60002 83 aaKnown RBP1.76□□□□□ -2.13
VPS13B-207ENST00000518569 C10orf128Q5T292 105 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 ATP5EP2Q5VTU8 51 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 XAF1Q6GPH4 301 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.76□□□□□ -2.13
VPS13B-207ENST00000518569 DMAC1Q96GE9 116 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 HIGD1BQ9P298 99 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 LINC00474Q9P2X8 69 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 PSORS1C2Q9UIG4 136 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 ICE1Q9Y2F5 2266 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 SVILO95425 2214 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 MED13LQ71F56 2210 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 LRRK2Q5S007 2527 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 CHD3Q12873 2000 aaKnown RBP1.76□□□□□ -2.13
VPS13B-207ENST00000518569 NAV3Q8IVL0 2385 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 PTPRDP23468 1912 aa1.76□□□□□ -2.13
VPS13B-207ENST00000518569 HELZP42694 1942 aaKnown RBP1.76□□□□□ -2.13
VPS13B-207ENST00000518569 ANK1P16157 1881 aa1.75□□□□□ -2.13
VPS13B-207ENST00000518569 SDK2Q58EX2 2172 aa1.75□□□□□ -2.13
VPS13B-207ENST00000518569 DSCAMO60469 2012 aa1.75□□□□□ -2.13
VPS13B-207ENST00000518569 HIGD1CA8MV81 97 aa1.75□□□□□ -2.13
VPS13B-207ENST00000518569 CHKB-CPT1BH3BT56 60 aa1.75□□□□□ -2.13
VPS13B-207ENST00000518569 COX8AP10176 69 aa1.75□□□□□ -2.13
VPS13B-207ENST00000518569 PLGLAQ15195 96 aa1.75□□□□□ -2.13
VPS13B-207ENST00000518569 BRD3OSQ6XYD6 125 aa1.75□□□□□ -2.13
VPS13B-207ENST00000518569 ZCCHC23Q6ZST2 131 aa1.75□□□□□ -2.13
VPS13B-207ENST00000518569 ZNF833PQ6ZTB9 187 aa1.75□□□□□ -2.13
VPS13B-207ENST00000518569 LYPD6Q86Y78 171 aa1.75□□□□□ -2.13
VPS13B-207ENST00000518569 CLECL1Q8IZS7 167 aa1.75□□□□□ -2.13
VPS13B-207ENST00000518569 AHCTF1Q8WYP5 2266 aa1.75□□□□□ -2.13
VPS13B-207ENST00000518569 F5P12259 2224 aa1.75□□□□□ -2.13
VPS13B-207ENST00000518569 FBN3Q75N90 2809 aa1.75□□□□□ -2.13
VPS13B-207ENST00000518569 PRRC2CQ9Y520 2896 aaKnown RBP1.74□□□□□ -2.13
VPS13B-207ENST00000518569 PDZD2O15018 2839 aa1.74□□□□□ -2.13
VPS13B-207ENST00000518569 NF1P21359 2839 aa1.74□□□□□ -2.13
VPS13B-207ENST00000518569 ADGRG4Q8IZF6 3080 aa1.74□□□□□ -2.13
VPS13B-207ENST00000518569 BAZ2BQ9UIF8 2168 aaKnown RBP1.74□□□□□ -2.13
VPS13B-207ENST00000518569 SPG11Q96JI7 2443 aa1.74□□□□□ -2.13
VPS13B-207ENST00000518569 TRAV22A0A0B4J277 110 aa1.74□□□□□ -2.13
VPS13B-207ENST00000518569 MYMXA0A1B0GTQ4 84 aa1.74□□□□□ -2.13
VPS13B-207ENST00000518569 CEBPZOSA8MTT3 80 aa1.74□□□□□ -2.13
VPS13B-207ENST00000518569 TMEM14DPA8MWL7 114 aa1.74□□□□□ -2.13
VPS13B-207ENST00000518569 IGHV3-33P01772 117 aa1.74□□□□□ -2.13
VPS13B-207ENST00000518569 SAA2P0DJI9 122 aaPredicted RBP1.74□□□□□ -2.13
VPS13B-207ENST00000518569 EFNA4P52798 201 aa1.74□□□□□ -2.13
VPS13B-207ENST00000518569 DEFB121Q5J5C9 76 aa1.74□□□□□ -2.13
VPS13B-207ENST00000518569 LYPD5Q6UWN5 251 aa1.74□□□□□ -2.13
VPS13B-207ENST00000518569 ORMDL1Q9P0S3 153 aa1.74□□□□□ -2.13
VPS13B-207ENST00000518569 V9GYH0 126 aa1.74□□□□□ -2.13
VPS13B-207ENST00000518569 COL4A2P08572 1712 aa1.74□□□□□ -2.13
VPS13B-207ENST00000518569 ANAPC1Q9H1A4 1944 aa1.74□□□□□ -2.13
VPS13B-207ENST00000518569 NBASA2RRP1 2371 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 MYO18AQ92614 2054 aaKnown RBP1.73□□□□□ -2.13
VPS13B-207ENST00000518569 ZFC3H1O60293 1989 aaKnown RBP1.73□□□□□ -2.13
VPS13B-207ENST00000518569 TMSB15BA0A087X1C1 80 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 CXorf51AA0A1B0GTR3 108 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 SDHAF1A6NFY7 115 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 SNRPGP15A8MWD9 76 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 FXYD1O00168 92 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 P0C880 135 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 PRB4P10163 310 aaPredicted RBP1.73□□□□□ -2.13
VPS13B-207ENST00000518569 GCHFRP30047 84 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 PDE6HQ13956 83 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 DEFB113Q30KQ7 82 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 BAGE3Q86Y29 109 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 BAGE2Q86Y30 109 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 DEFB124Q8NES8 71 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 PPP1R1CQ8WVI7 109 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 IFI27L1Q96BM0 104 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 AMELXQ99217 191 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 GNG13Q9P2W3 67 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 Q9Y3F1 56 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 LENEPQ9Y5L5 61 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 LHFPL6Q9Y693 200 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 MED13Q9UHV7 2174 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 NIPBLQ6KC79 2804 aaeCLIP1.73□□□□□ -2.13
VPS13B-207ENST00000518569 USP9YO00507 2555 aaPredicted RBP1.73□□□□□ -2.13
VPS13B-207ENST00000518569 TLN1Q9Y490 2541 aaKnown RBP1.73□□□□□ -2.13
VPS13B-207ENST00000518569 MYOFQ9NZM1 2061 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 CSMD1Q96PZ7 3565 aa1.73□□□□□ -2.13
VPS13B-207ENST00000518569 RP1L1Q8IWN7 2480 aaPredicted RBP1.73□□□□□ -2.13
VPS13B-207ENST00000518569 SPENQ96T58 3664 aaKnown RBP1.72□□□□□ -2.13
VPS13B-207ENST00000518569 F8P00451 2351 aa1.72□□□□□ -2.13
VPS13B-207ENST00000518569 TCHHQ07283 1943 aa1.72□□□□□ -2.13
VPS13B-207ENST00000518569 PCNX1Q96RV3 2341 aa1.72□□□□□ -2.13
VPS13B-207ENST00000518569 UBE2D1P51668 147 aa1.72□□□□□ -2.13
VPS13B-207ENST00000518569 C1orf137Q5JT78 98 aa1.72□□□□□ -2.13
VPS13B-207ENST00000518569 Q6ZTI0 123 aa1.72□□□□□ -2.13
VPS13B-207ENST00000518569 Q86TA4 180 aa1.72□□□□□ -2.13
VPS13B-207ENST00000518569 C20orf197Q8N268 126 aa1.72□□□□□ -2.13
VPS13B-207ENST00000518569 Q8TAT8 98 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms