RNA–Protein interactions for RNA: ENST00000518018.1

TRPS1-207, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-207ENST00000518018 TRAV21A0A0B4J279 112 aa2.34□□□□□ -2.03
TRPS1-207ENST00000518018 IGKV2-24A0A0C4DH68 120 aa2.34□□□□□ -2.03
TRPS1-207ENST00000518018 SDHAF1A6NFY7 115 aa2.34□□□□□ -2.03
TRPS1-207ENST00000518018 IGKV2D-40P01614 121 aaPredicted RBP2.34□□□□□ -2.03
TRPS1-207ENST00000518018 C1orf137Q5JT78 98 aa2.34□□□□□ -2.03
TRPS1-207ENST00000518018 C10orf55Q5SWW7 151 aa2.34□□□□□ -2.03
TRPS1-207ENST00000518018 LINC00322Q6ZN03 302 aaPredicted RBP2.34□□□□□ -2.03
TRPS1-207ENST00000518018 LINC00643Q86TS7 51 aa2.34□□□□□ -2.03
TRPS1-207ENST00000518018 DEFB108BQ8NET1 73 aa2.34□□□□□ -2.03
TRPS1-207ENST00000518018 C10orf105Q8TEF2 133 aa2.34□□□□□ -2.03
TRPS1-207ENST00000518018 GAFA1Q96PS6 74 aa2.34□□□□□ -2.03
TRPS1-207ENST00000518018 PROK2Q9HC23 129 aa2.34□□□□□ -2.03
TRPS1-207ENST00000518018 TET1Q8NFU7 2136 aa2.33□□□□□ -2.04
TRPS1-207ENST00000518018 TRAV17A0A0B4J275 112 aa2.33□□□□□ -2.04
TRPS1-207ENST00000518018 TRBV30A0A0K0K1B3 111 aa2.33□□□□□ -2.04
TRPS1-207ENST00000518018 C10orf142B7Z368 130 aa2.33□□□□□ -2.04
TRPS1-207ENST00000518018 RHOHQ15669 191 aa2.33□□□□□ -2.04
TRPS1-207ENST00000518018 Q1T7F1 81 aa2.33□□□□□ -2.04
TRPS1-207ENST00000518018 ATP5EP2Q5VTU8 51 aa2.33□□□□□ -2.04
TRPS1-207ENST00000518018 SBSPONQ8IVN8 264 aa2.33□□□□□ -2.04
TRPS1-207ENST00000518018 DSCR8Q96T75 97 aa2.33□□□□□ -2.04
TRPS1-207ENST00000518018 LENEPQ9Y5L5 61 aa2.33□□□□□ -2.04
TRPS1-207ENST00000518018 FREM1Q5H8C1 2179 aa2.33□□□□□ -2.04
TRPS1-207ENST00000518018 KIAA0100Q14667 2235 aaKnown RBP2.33□□□□□ -2.04
TRPS1-207ENST00000518018 UNC13CQ8NB66 2214 aa2.33□□□□□ -2.04
TRPS1-207ENST00000518018 A0A0J9YY99 117 aa2.32□□□□□ -2.04
TRPS1-207ENST00000518018 COX7CP15954 63 aa2.32□□□□□ -2.04
TRPS1-207ENST00000518018 EFNA4P52798 201 aa2.32□□□□□ -2.04
TRPS1-207ENST00000518018 SPRNQ5BIV9 151 aa2.32□□□□□ -2.04
TRPS1-207ENST00000518018 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.32□□□□□ -2.04
TRPS1-207ENST00000518018 NDUFA12Q9UI09 145 aa2.32□□□□□ -2.04
TRPS1-207ENST00000518018 FN1P02751 2386 aaKnown RBP2.32□□□□□ -2.04
TRPS1-207ENST00000518018 DOCK10Q96BY6 2186 aa2.32□□□□□ -2.04
TRPS1-207ENST00000518018 PCDH15Q96QU1 1955 aa2.31□□□□□ -2.04
TRPS1-207ENST00000518018 TEX49A0A1B0GTD5 131 aa2.31□□□□□ -2.04
TRPS1-207ENST00000518018 I3L2K1 104 aa2.31□□□□□ -2.04
TRPS1-207ENST00000518018 IGHV3-30P01768 117 aa2.31□□□□□ -2.04
TRPS1-207ENST00000518018 IGHV3-33P01772 117 aa2.31□□□□□ -2.04
TRPS1-207ENST00000518018 TFF1P04155 84 aa2.31□□□□□ -2.04
TRPS1-207ENST00000518018 APELAP0DMC3 54 aa2.31□□□□□ -2.04
TRPS1-207ENST00000518018 IGHV3-30-5P0DP03 117 aa2.31□□□□□ -2.04
TRPS1-207ENST00000518018 CCL3L1P16619 93 aa2.31□□□□□ -2.04
TRPS1-207ENST00000518018 ATP5EP56381 51 aaPredicted RBP2.31□□□□□ -2.04
TRPS1-207ENST00000518018 CNBPP62633 177 aaKnown RBP2.31□□□□□ -2.04
TRPS1-207ENST00000518018 C4orf3Q8WVX3 66 aa2.31□□□□□ -2.04
TRPS1-207ENST00000518018 TRBV7-1A0A0A6YYK4 115 aa2.3□□□□□ -2.04
TRPS1-207ENST00000518018 hADV29S1A0JD25 119 aa2.3□□□□□ -2.04
TRPS1-207ENST00000518018 IGKV1-17P01599 117 aa2.3□□□□□ -2.04
TRPS1-207ENST00000518018 CRIP1P50238 77 aa2.3□□□□□ -2.04
TRPS1-207ENST00000518018 CCL8P80075 99 aa2.3□□□□□ -2.04
TRPS1-207ENST00000518018 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.3□□□□□ -2.04
TRPS1-207ENST00000518018 TMEM263Q8WUH6 116 aaKnown RBP2.3□□□□□ -2.04
TRPS1-207ENST00000518018 I3L3M4 83 aa2.29□□□□□ -2.04
TRPS1-207ENST00000518018 K7EIM0 57 aa2.29□□□□□ -2.04
TRPS1-207ENST00000518018 COX6B1P14854 86 aa2.29□□□□□ -2.04
TRPS1-207ENST00000518018 FAM74A4Q5TZK3 123 aa2.29□□□□□ -2.04
TRPS1-207ENST00000518018 SERP2Q8N6R1 65 aa2.29□□□□□ -2.04
TRPS1-207ENST00000518018 LINC01600Q96MT4 127 aa2.29□□□□□ -2.04
TRPS1-207ENST00000518018 ODF3Q96PU9 254 aa2.29□□□□□ -2.04
TRPS1-207ENST00000518018 MRPL36Q9P0J6 103 aaKnown RBP2.29□□□□□ -2.04
TRPS1-207ENST00000518018 ORMDL1Q9P0S3 153 aa2.29□□□□□ -2.04
TRPS1-207ENST00000518018 KAAG1Q9UBP8 84 aa2.29□□□□□ -2.04
TRPS1-207ENST00000518018 ARFGEF3Q5TH69 2177 aa2.29□□□□□ -2.04
TRPS1-207ENST00000518018 ALPK2Q86TB3 2170 aa2.29□□□□□ -2.04
TRPS1-207ENST00000518018 DOCK11Q5JSL3 2073 aa2.29□□□□□ -2.04
TRPS1-207ENST00000518018 GOLGA4Q13439 2230 aaKnown RBP2.28□□□□□ -2.04
TRPS1-207ENST00000518018 TRBV6-8A0A0A6YYG3 113 aa2.28□□□□□ -2.04
TRPS1-207ENST00000518018 TRAV13-2A0A0B4J235 113 aa2.28□□□□□ -2.04
TRPS1-207ENST00000518018 TRAV12-3A0A0B4J271 114 aa2.28□□□□□ -2.04
TRPS1-207ENST00000518018 FAM223BA6NKX1 122 aa2.28□□□□□ -2.04
TRPS1-207ENST00000518018 M0R1W7 72 aa2.28□□□□□ -2.04
TRPS1-207ENST00000518018 NDUFC1O43677 76 aa2.28□□□□□ -2.04
TRPS1-207ENST00000518018 PRB4P10163 310 aaPredicted RBP2.28□□□□□ -2.04
TRPS1-207ENST00000518018 MINOS1Q5TGZ0 78 aa2.28□□□□□ -2.04
TRPS1-207ENST00000518018 Q6JHZ5 121 aa2.28□□□□□ -2.04
TRPS1-207ENST00000518018 C5orf38Q86SI9 138 aa2.28□□□□□ -2.04
TRPS1-207ENST00000518018 MUSTN1Q8IVN3 82 aa2.28□□□□□ -2.04
TRPS1-207ENST00000518018 FAM223AQ8IWN6 122 aa2.28□□□□□ -2.04
TRPS1-207ENST00000518018 UBL5Q9BZL1 73 aa2.28□□□□□ -2.04
TRPS1-207ENST00000518018 U3KQA8 63 aa2.28□□□□□ -2.04
TRPS1-207ENST00000518018 TRGV4A0A0C4DH28 118 aa2.27□□□□□ -2.05
TRPS1-207ENST00000518018 TRBV6-5A0A0K0K1A5 114 aa2.27□□□□□ -2.05
TRPS1-207ENST00000518018 JMJD7-PLA2G4BH0Y9G9 81 aa2.27□□□□□ -2.05
TRPS1-207ENST00000518018 H0YGX0 51 aa2.27□□□□□ -2.05
TRPS1-207ENST00000518018 DEFB121Q5J5C9 76 aa2.27□□□□□ -2.05
TRPS1-207ENST00000518018 RPL39LQ96EH5 51 aaKnown RBP2.27□□□□□ -2.05
TRPS1-207ENST00000518018 ZGRF1Q86YA3 2104 aa2.27□□□□□ -2.05
TRPS1-207ENST00000518018 CR1P17927 2039 aa2.27□□□□□ -2.05
TRPS1-207ENST00000518018 ICE1Q9Y2F5 2266 aa2.26□□□□□ -2.05
TRPS1-207ENST00000518018 PRRC2BQ5JSZ5 2229 aaKnown RBP2.26□□□□□ -2.05
TRPS1-207ENST00000518018 TNRC18O15417 2968 aaPredicted RBP2.26□□□□□ -2.05
TRPS1-207ENST00000518018 NDUFA4O00483 81 aa2.26□□□□□ -2.05
TRPS1-207ENST00000518018 NDUFA1O15239 70 aa2.26□□□□□ -2.05
TRPS1-207ENST00000518018 RBM3P98179 157 aaKnown RBP2.26□□□□□ -2.05
TRPS1-207ENST00000518018 PP632Q6XCG6 107 aa2.26□□□□□ -2.05
TRPS1-207ENST00000518018 LINC00304Q8N9R0 145 aa2.26□□□□□ -2.05
TRPS1-207ENST00000518018 IGIPA6NJ69 53 aa2.25□□□□□ -2.05
TRPS1-207ENST00000518018 H3BUA1 57 aa2.25□□□□□ -2.05
TRPS1-207ENST00000518018 BCE1O60756 84 aa2.25□□□□□ -2.05
TRPS1-207ENST00000518018 KRTAP10-1P60331 282 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms