RNA–Protein interactions for RNA: ENST00000517354.5

CPNE3-201, Transcript of copine 3, humanhuman

TSL 4

Gene CPNE3, Length 566 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-201ENST00000517354 hDV103S1A0JD37 113 aa2.44□□□□□ -2.02
CPNE3-201ENST00000517354 SPINT3P49223 89 aa2.44□□□□□ -2.02
CPNE3-201ENST00000517354 SPRNQ5BIV9 151 aa2.44□□□□□ -2.02
CPNE3-201ENST00000517354 ATP11AUNQ6ZP68 121 aa2.44□□□□□ -2.02
CPNE3-201ENST00000517354 VSTM2AQ8TAG5 236 aa2.44□□□□□ -2.02
CPNE3-201ENST00000517354 CCL19Q99731 98 aa2.44□□□□□ -2.02
CPNE3-201ENST00000517354 NPVFQ9HCQ7 196 aa2.44□□□□□ -2.02
CPNE3-201ENST00000517354 MED9Q9NWA0 146 aa2.44□□□□□ -2.02
CPNE3-201ENST00000517354 AP4S1Q9Y587 144 aa2.44□□□□□ -2.02
CPNE3-201ENST00000517354 ANK3Q12955 4377 aaKnown RBP2.44□□□□□ -2.02
CPNE3-201ENST00000517354 FREM1Q5H8C1 2179 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 MUC4Q99102 2169 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 TRAV10A0A0B4J240 114 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 LOC107984156A0A0G2JMH3 177 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 FAM24AA6NFZ4 105 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 E7EUB6 86 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 J3QLW9 94 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 NDUFB6O95139 128 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 STATHP02808 62 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 IL5P05113 134 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 LINC00032P0C843 101 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 RNASE3P12724 160 aaKnown RBP2.43□□□□□ -2.02
CPNE3-201ENST00000517354 SNCAP37840 140 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 ETV6P41212 452 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 Q0VG73 95 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 INSL4Q14641 139 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 UNQ5815/PRO19632Q6UWF5 114 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 ARL17AQ8IVW1 177 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 Q8N8P6 123 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 ATP6V0E2Q8NHE4 81 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 KLK9Q9UKQ9 250 aa2.43□□□□□ -2.02
CPNE3-201ENST00000517354 CADP27708 2225 aa2.42□□□□□ -2.02
CPNE3-201ENST00000517354 TRBV6-8A0A0A6YYG3 113 aa2.42□□□□□ -2.02
CPNE3-201ENST00000517354 H3BQ15 152 aa2.42□□□□□ -2.02
CPNE3-201ENST00000517354 ERC2-IT1O76042 136 aa2.42□□□□□ -2.02
CPNE3-201ENST00000517354 ASB16-AS1Q495Z4 193 aa2.42□□□□□ -2.02
CPNE3-201ENST00000517354 TSKUQ8WUA8 353 aa2.42□□□□□ -2.02
CPNE3-201ENST00000517354 SPTSSAQ969W0 71 aa2.42□□□□□ -2.02
CPNE3-201ENST00000517354 LINC00052Q96N35 136 aa2.42□□□□□ -2.02
CPNE3-201ENST00000517354 DPH3P1Q9H4G8 78 aa2.42□□□□□ -2.02
CPNE3-201ENST00000517354 TMEM242Q9NWH2 141 aa2.42□□□□□ -2.02
CPNE3-201ENST00000517354 BET1LQ9NYM9 111 aa2.42□□□□□ -2.02
CPNE3-201ENST00000517354 VWFP04275 2813 aa2.42□□□□□ -2.02
CPNE3-201ENST00000517354 CR1P17927 2039 aa2.42□□□□□ -2.02
CPNE3-201ENST00000517354 SMIM31A0A1B0GVY4 71 aa2.41□□□□□ -2.02
CPNE3-201ENST00000517354 SNCGO76070 127 aa2.41□□□□□ -2.02
CPNE3-201ENST00000517354 NMBP08949 121 aa2.41□□□□□ -2.02
CPNE3-201ENST00000517354 COX7CP15954 63 aa2.41□□□□□ -2.02
CPNE3-201ENST00000517354 C6orf52Q5T4I8 152 aa2.41□□□□□ -2.02
CPNE3-201ENST00000517354 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.41□□□□□ -2.02
CPNE3-201ENST00000517354 ARPINQ7Z6K5 226 aa2.41□□□□□ -2.02
CPNE3-201ENST00000517354 SBSPONQ8IVN8 264 aa2.41□□□□□ -2.02
CPNE3-201ENST00000517354 LINC00269Q8N2A0 174 aa2.41□□□□□ -2.02
CPNE3-201ENST00000517354 SVEP1Q4LDE5 3571 aa2.41□□□□□ -2.02
CPNE3-201ENST00000517354 MED12Q93074 2177 aa2.4□□□□□ -2.02
CPNE3-201ENST00000517354 K7EP34 96 aa2.4□□□□□ -2.03
CPNE3-201ENST00000517354 GNGT2O14610 69 aa2.4□□□□□ -2.03
CPNE3-201ENST00000517354 PIRTP0C851 137 aa2.4□□□□□ -2.03
CPNE3-201ENST00000517354 DEFB110Q30KQ9 67 aa2.4□□□□□ -2.03
CPNE3-201ENST00000517354 TDRG1Q3Y452 100 aa2.4□□□□□ -2.03
CPNE3-201ENST00000517354 S100A7L2Q5SY68 101 aa2.4□□□□□ -2.03
CPNE3-201ENST00000517354 ZNF431Q8TF32 576 aaPredicted RBP2.4□□□□□ -2.03
CPNE3-201ENST00000517354 KMT2CQ8NEZ4 4911 aaKnown RBP2.4□□□□□ -2.03
CPNE3-201ENST00000517354 PRB4P10163 310 aaPredicted RBP2.39□□□□□ -2.03
CPNE3-201ENST00000517354 RBM3P98179 157 aaKnown RBP2.39□□□□□ -2.03
CPNE3-201ENST00000517354 PEA15Q15121 130 aa2.39□□□□□ -2.03
CPNE3-201ENST00000517354 C15orf53Q8NAA6 179 aa2.39□□□□□ -2.03
CPNE3-201ENST00000517354 C10orf82Q8WW14 230 aa2.39□□□□□ -2.03
CPNE3-201ENST00000517354 SNURFQ9Y675 71 aa2.39□□□□□ -2.03
CPNE3-201ENST00000517354 TRRAPQ9Y4A5 3859 aa2.39□□□□□ -2.03
CPNE3-201ENST00000517354 ROS1P08922 2347 aa2.39□□□□□ -2.03
CPNE3-201ENST00000517354 A0A087WSZ3 146 aa2.38□□□□□ -2.03
CPNE3-201ENST00000517354 DEFB108AA8MXU0 73 aa2.38□□□□□ -2.03
CPNE3-201ENST00000517354 SLC25A6P12236 298 aa2.38□□□□□ -2.03
CPNE3-201ENST00000517354 PRKDCP78527 4128 aaKnown RBP2.38□□□□□ -2.03
CPNE3-201ENST00000517354 RYR3Q15413 4870 aa2.38□□□□□ -2.03
CPNE3-201ENST00000517354 ALKAL2Q6UX46 152 aa2.38□□□□□ -2.03
CPNE3-201ENST00000517354 ZCCHC23Q6ZST2 131 aa2.38□□□□□ -2.03
CPNE3-201ENST00000517354 ZNF833PQ6ZTB9 187 aa2.38□□□□□ -2.03
CPNE3-201ENST00000517354 SLC25A26Q70HW3 274 aa2.38□□□□□ -2.03
CPNE3-201ENST00000517354 C5orf38Q86SI9 138 aa2.38□□□□□ -2.03
CPNE3-201ENST00000517354 SMIM7Q9BQ49 75 aa2.38□□□□□ -2.03
CPNE3-201ENST00000517354 UBE2L5PA0A1B0GUS4 154 aa2.37□□□□□ -2.03
CPNE3-201ENST00000517354 hADV29S1A0JD25 119 aa2.37□□□□□ -2.03
CPNE3-201ENST00000517354 SSSCA1O60232 199 aa2.37□□□□□ -2.03
CPNE3-201ENST00000517354 ADCYAP1P18509 176 aa2.37□□□□□ -2.03
CPNE3-201ENST00000517354 UBE2L3P68036 154 aaKnown RBP2.37□□□□□ -2.03
CPNE3-201ENST00000517354 IQCJQ1A5X6 159 aa2.37□□□□□ -2.03
CPNE3-201ENST00000517354 C12orf73Q69YU5 71 aa2.37□□□□□ -2.03
CPNE3-201ENST00000517354 PMCHL2Q9BQD1 86 aa2.37□□□□□ -2.03
CPNE3-201ENST00000517354 NDUFA12Q9UI09 145 aa2.37□□□□□ -2.03
CPNE3-201ENST00000517354 TENM3Q9P273 2699 aa2.36□□□□□ -2.03
CPNE3-201ENST00000517354 FREM3P0C091 2139 aa2.36□□□□□ -2.03
CPNE3-201ENST00000517354 IGKV3D-7A0A0C4DH55 119 aa2.36□□□□□ -2.03
CPNE3-201ENST00000517354 IGKV3OR2-268A0A0C4DH90 116 aa2.36□□□□□ -2.03
CPNE3-201ENST00000517354 H0YGG7 62 aa2.36□□□□□ -2.03
CPNE3-201ENST00000517354 NUPR1O60356 82 aa2.36□□□□□ -2.03
CPNE3-201ENST00000517354 PIPP12273 146 aaPredicted RBP2.36□□□□□ -2.03
CPNE3-201ENST00000517354 ATP5EP56381 51 aaPredicted RBP2.36□□□□□ -2.03
CPNE3-201ENST00000517354 CASC2Q6XLA1 102 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms