RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 LINC00173Q6ZV60 143 aa4.89□□□□□ -1.63
SCARNA20.3-201ENST00000516913 D6R8Y8 96 aa4.88□□□□□ -1.63
SCARNA20.3-201ENST00000516913 TNFRSF6BO95407 300 aa4.88□□□□□ -1.63
SCARNA20.3-201ENST00000516913 FCER1GP30273 86 aa4.88□□□□□ -1.63
SCARNA20.3-201ENST00000516913 RPL32P62910 135 aaKnown RBP4.88□□□□□ -1.63
SCARNA20.3-201ENST00000516913 OR10D4PQ8NGN7 298 aa4.88□□□□□ -1.63
SCARNA20.3-201ENST00000516913 DIRC1Q969H9 104 aa4.88□□□□□ -1.63
SCARNA20.3-201ENST00000516913 HIST1H2BLQ99880 126 aa4.88□□□□□ -1.63
SCARNA20.3-201ENST00000516913 ANAPC11Q9NYG5 84 aa4.88□□□□□ -1.63
SCARNA20.3-201ENST00000516913 IGLV4-3A0A075B6K6 122 aa4.87□□□□□ -1.63
SCARNA20.3-201ENST00000516913 MRPS36P82909 103 aaKnown RBP4.87□□□□□ -1.63
SCARNA20.3-201ENST00000516913 FAM19A2Q8N3H0 131 aa4.87□□□□□ -1.63
SCARNA20.3-201ENST00000516913 BORCS7Q96B45 105 aa4.87□□□□□ -1.63
SCARNA20.3-201ENST00000516913 PRELID3AQ96N28 172 aa4.87□□□□□ -1.63
SCARNA20.3-201ENST00000516913 S100A8P05109 93 aa4.86□□□□□ -1.63
SCARNA20.3-201ENST00000516913 FABP4P15090 132 aa4.86□□□□□ -1.63
SCARNA20.3-201ENST00000516913 PRR4Q16378 134 aa4.86□□□□□ -1.63
SCARNA20.3-201ENST00000516913 BAGE3Q86Y29 109 aa4.86□□□□□ -1.63
SCARNA20.3-201ENST00000516913 C20orf78Q9BR46 151 aa4.86□□□□□ -1.63
SCARNA20.3-201ENST00000516913 SMIM2Q9BVW6 85 aa4.86□□□□□ -1.63
SCARNA20.3-201ENST00000516913 IGLV1-50A0A075B6I6 118 aa4.85□□□□□ -1.63
SCARNA20.3-201ENST00000516913 A0A096LNJ9 63 aa4.85□□□□□ -1.63
SCARNA20.3-201ENST00000516913 LOC389332A0A1B0GUA5 103 aa4.85□□□□□ -1.63
SCARNA20.3-201ENST00000516913 M0QXV9 152 aa4.85□□□□□ -1.63
SCARNA20.3-201ENST00000516913 NDUFA1O15239 70 aa4.85□□□□□ -1.63
SCARNA20.3-201ENST00000516913 TSPAN13O95857 204 aa4.85□□□□□ -1.63
SCARNA20.3-201ENST00000516913 CKS2P33552 79 aa4.85□□□□□ -1.63
SCARNA20.3-201ENST00000516913 IFI27P40305 119 aaPredicted RBP4.85□□□□□ -1.63
SCARNA20.3-201ENST00000516913 AKR1D1P51857 326 aa4.85□□□□□ -1.63
SCARNA20.3-201ENST00000516913 PMCHL1Q16048 86 aa4.85□□□□□ -1.63
SCARNA20.3-201ENST00000516913 KRTAP13-2Q52LG2 175 aa4.85□□□□□ -1.63
SCARNA20.3-201ENST00000516913 LINC00469Q8N7U9 141 aa4.85□□□□□ -1.63
SCARNA20.3-201ENST00000516913 KIR2DL4Q99706 377 aa4.85□□□□□ -1.63
SCARNA20.3-201ENST00000516913 PRSS47A8MTI9 375 aa4.84□□□□□ -1.63
SCARNA20.3-201ENST00000516913 UBE2D1P51668 147 aa4.84□□□□□ -1.63
SCARNA20.3-201ENST00000516913 PYY3Q5JQD4 70 aa4.84□□□□□ -1.63
SCARNA20.3-201ENST00000516913 ORMDL3Q8N138 153 aa4.84□□□□□ -1.63
SCARNA20.3-201ENST00000516913 XAGE1AQ9HD64 81 aa4.84□□□□□ -1.63
SCARNA20.3-201ENST00000516913 SPANXA1Q9NS26 97 aa4.84□□□□□ -1.63
SCARNA20.3-201ENST00000516913 PKIGQ9Y2B9 76 aa4.84□□□□□ -1.63
SCARNA20.3-201ENST00000516913 C22orf24Q9Y442 160 aa4.84□□□□□ -1.63
SCARNA20.3-201ENST00000516913 LINC01546A6NGU7 62 aa4.83□□□□□ -1.64
SCARNA20.3-201ENST00000516913 ZNF861PO60384 105 aa4.83□□□□□ -1.64
SCARNA20.3-201ENST00000516913 LINC00614P0C842 121 aa4.83□□□□□ -1.64
SCARNA20.3-201ENST00000516913 LINC00518Q8N0U6 118 aa4.83□□□□□ -1.64
SCARNA20.3-201ENST00000516913 NDUFC2-KCTD14E9PQ53 114 aa4.82□□□□□ -1.64
SCARNA20.3-201ENST00000516913 PPBPP02775 128 aa4.82□□□□□ -1.64
SCARNA20.3-201ENST00000516913 S100A2P29034 98 aa4.82□□□□□ -1.64
SCARNA20.3-201ENST00000516913 KRTAP13-1Q8IUC0 172 aa4.82□□□□□ -1.64
SCARNA20.3-201ENST00000516913 TMEM18Q96B42 140 aa4.82□□□□□ -1.64
SCARNA20.3-201ENST00000516913 PACRGQ96M98 296 aaPredicted RBP4.82□□□□□ -1.64
SCARNA20.3-201ENST00000516913 AMELXQ99217 191 aa4.82□□□□□ -1.64
SCARNA20.3-201ENST00000516913 RETNLBQ9BQ08 111 aa4.82□□□□□ -1.64
SCARNA20.3-201ENST00000516913 PYGO1Q9Y3Y4 419 aa4.82□□□□□ -1.64
SCARNA20.3-201ENST00000516913 KRTAP9-6A0A140TA67 174 aa4.81□□□□□ -1.64
SCARNA20.3-201ENST00000516913 IGIPA6NJ69 53 aa4.81□□□□□ -1.64
SCARNA20.3-201ENST00000516913 F8WDY8 70 aa4.81□□□□□ -1.64
SCARNA20.3-201ENST00000516913 CHCHD1Q96BP2 118 aaKnown RBP4.81□□□□□ -1.64
SCARNA20.3-201ENST00000516913 KRTAP4-1Q9BYQ7 146 aa4.81□□□□□ -1.64
SCARNA20.3-201ENST00000516913 TRBV30A0A0K0K1B3 111 aa4.8□□□□□ -1.64
SCARNA20.3-201ENST00000516913 PPP1R17O96001 155 aa4.8□□□□□ -1.64
SCARNA20.3-201ENST00000516913 C3orf79P0CE67 100 aa4.8□□□□□ -1.64
SCARNA20.3-201ENST00000516913 UBE2BP63146 152 aa4.8□□□□□ -1.64
SCARNA20.3-201ENST00000516913 JOSD1Q15040 202 aaPredicted RBP4.8□□□□□ -1.64
SCARNA20.3-201ENST00000516913 C2orf66Q6UXQ4 117 aa4.8□□□□□ -1.64
SCARNA20.3-201ENST00000516913 Q8N8P6 123 aa4.8□□□□□ -1.64
SCARNA20.3-201ENST00000516913 Q8NDZ9 215 aa4.8□□□□□ -1.64
SCARNA20.3-201ENST00000516913 MAP1LC3AQ9H492 121 aa4.8□□□□□ -1.64
SCARNA20.3-201ENST00000516913 CDKN2A-AS1Q9UH64 79 aa4.8□□□□□ -1.64
SCARNA20.3-201ENST00000516913 LAMTOR2Q9Y2Q5 125 aa4.8□□□□□ -1.64
SCARNA20.3-201ENST00000516913 HSBP1O75506 76 aa4.79□□□□□ -1.64
SCARNA20.3-201ENST00000516913 FA2HQ7L5A8 372 aa4.79□□□□□ -1.64
SCARNA20.3-201ENST00000516913 FAM19A3Q7Z5A8 133 aa4.79□□□□□ -1.64
SCARNA20.3-201ENST00000516913 LINC00167Q96N53 147 aa4.79□□□□□ -1.64
SCARNA20.3-201ENST00000516913 C12orf57Q99622 126 aa4.79□□□□□ -1.64
SCARNA20.3-201ENST00000516913 RPL37AP8A6NKH3 93 aa4.78□□□□□ -1.64
SCARNA20.3-201ENST00000516913 KRTDAPP60985 99 aa4.78□□□□□ -1.64
SCARNA20.3-201ENST00000516913 TMEM141Q96I45 108 aa4.78□□□□□ -1.64
SCARNA20.3-201ENST00000516913 FSIP2Q5CZC0 6907 aa4.78□□□□□ -1.64
SCARNA20.3-201ENST00000516913 GAGE10A6NGK3 116 aa4.77□□□□□ -1.65
SCARNA20.3-201ENST00000516913 SMIM6P0DI80 62 aa4.77□□□□□ -1.65
SCARNA20.3-201ENST00000516913 LINC01561Q8N1V8 128 aa4.77□□□□□ -1.65
SCARNA20.3-201ENST00000516913 NXT2Q9NPJ8 142 aaKnown RBP4.77□□□□□ -1.65
SCARNA20.3-201ENST00000516913 TOMM7Q9P0U1 55 aa4.77□□□□□ -1.65
SCARNA20.3-201ENST00000516913 BCE1O60756 84 aa4.76□□□□□ -1.65
SCARNA20.3-201ENST00000516913 LEPROTL1O95214 131 aa4.76□□□□□ -1.65
SCARNA20.3-201ENST00000516913 RPL13AP40429 203 aaKnown RBP4.76□□□□□ -1.65
SCARNA20.3-201ENST00000516913 SMAGPQ0VAQ4 97 aa4.76□□□□□ -1.65
SCARNA20.3-201ENST00000516913 PMCHL2Q9BQD1 86 aa4.76□□□□□ -1.65
SCARNA20.3-201ENST00000516913 SMIM1B2RUZ4 78 aa4.75□□□□□ -1.65
SCARNA20.3-201ENST00000516913 SYS1-DBNDD2H3BUS1 97 aa4.75□□□□□ -1.65
SCARNA20.3-201ENST00000516913 SCGB1D1O95968 90 aa4.75□□□□□ -1.65
SCARNA20.3-201ENST00000516913 HBDP02042 147 aa4.75□□□□□ -1.65
SCARNA20.3-201ENST00000516913 TEX43Q6ZNM6 134 aa4.75□□□□□ -1.65
SCARNA20.3-201ENST00000516913 MRPL55Q7Z7F7 128 aaKnown RBP4.75□□□□□ -1.65
SCARNA20.3-201ENST00000516913 Q8IZM0 81 aa4.75□□□□□ -1.65
SCARNA20.3-201ENST00000516913 ATOH7Q8N100 152 aa4.75□□□□□ -1.65
SCARNA20.3-201ENST00000516913 TOMM6Q96B49 74 aa4.75□□□□□ -1.65
SCARNA20.3-201ENST00000516913 C6orf226Q5I0X4 101 aa4.74□□□□□ -1.65
SCARNA20.3-201ENST00000516913 Q6ZN92 141 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms