RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 CXCL5P42830 114 aa5.11□□□□□ -1.59
SCARNA20.1-201ENST00000516009 SPAG11BQ08648 103 aa5.11□□□□□ -1.59
SCARNA20.1-201ENST00000516009 KIAA0087Q14695 138 aa5.11□□□□□ -1.59
SCARNA20.1-201ENST00000516009 LITAFQ99732 161 aa5.11□□□□□ -1.59
SCARNA20.1-201ENST00000516009 SPANXDQ9BXN6 97 aa5.11□□□□□ -1.59
SCARNA20.1-201ENST00000516009 SPANXCQ9NY87 97 aa5.11□□□□□ -1.59
SCARNA20.1-201ENST00000516009 DNAH1Q9P2D7 4330 aa5.11□□□□□ -1.59
SCARNA20.1-201ENST00000516009 A0A0U1RRA0 63 aa5.1□□□□□ -1.59
SCARNA20.1-201ENST00000516009 SMIM13P0DJ93 91 aa5.1□□□□□ -1.59
SCARNA20.1-201ENST00000516009 RPL24P83731 157 aaKnown RBP5.1□□□□□ -1.59
SCARNA20.1-201ENST00000516009 ADAMTSL4-AS1Q5T5F5 129 aa5.1□□□□□ -1.59
SCARNA20.1-201ENST00000516009 VPS13DQ5THJ4 4388 aa5.1□□□□□ -1.59
SCARNA20.1-201ENST00000516009 C2orf82Q6UX34 121 aa5.1□□□□□ -1.59
SCARNA20.1-201ENST00000516009 MUC7Q8TAX7 377 aa5.1□□□□□ -1.59
SCARNA20.1-201ENST00000516009 NHP2Q9NX24 153 aaKnown RBP5.1□□□□□ -1.59
SCARNA20.1-201ENST00000516009 TENM2Q9NT68 2774 aa5.1□□□□□ -1.59
SCARNA20.1-201ENST00000516009 ZNF561-AS1K7EIQ3 104 aa5.09□□□□□ -1.59
SCARNA20.1-201ENST00000516009 IFITM1P13164 125 aa5.09□□□□□ -1.59
SCARNA20.1-201ENST00000516009 MUSTN1Q8IVN3 82 aa5.09□□□□□ -1.59
SCARNA20.1-201ENST00000516009 COPS9Q8WXC6 57 aa5.09□□□□□ -1.59
SCARNA20.1-201ENST00000516009 WWC2-AS2Q96NR7 200 aa5.09□□□□□ -1.59
SCARNA20.1-201ENST00000516009 ERG28Q9UKR5 140 aa5.09□□□□□ -1.59
SCARNA20.1-201ENST00000516009 COX11Q9Y6N1 276 aa5.09□□□□□ -1.59
SCARNA20.1-201ENST00000516009 A4D1N5 150 aa5.08□□□□□ -1.6
SCARNA20.1-201ENST00000516009 PFN2P35080 140 aa5.08□□□□□ -1.6
SCARNA20.1-201ENST00000516009 LINC00158P58513 81 aa5.08□□□□□ -1.6
SCARNA20.1-201ENST00000516009 NPC2P61916 151 aa5.08□□□□□ -1.6
SCARNA20.1-201ENST00000516009 TTC32Q5I0X7 151 aa5.08□□□□□ -1.6
SCARNA20.1-201ENST00000516009 C6orf223Q8N319 242 aa5.08□□□□□ -1.6
SCARNA20.1-201ENST00000516009 DAND5Q8N907 189 aa5.08□□□□□ -1.6
SCARNA20.1-201ENST00000516009 C15orf56Q8N910 161 aa5.08□□□□□ -1.6
SCARNA20.1-201ENST00000516009 LINC00526Q96FQ7 95 aa5.08□□□□□ -1.6
SCARNA20.1-201ENST00000516009 TGP01266 2768 aa5.08□□□□□ -1.6
SCARNA20.1-201ENST00000516009 LYSTQ99698 3801 aa5.07□□□□□ -1.6
SCARNA20.1-201ENST00000516009 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.07□□□□□ -1.6
SCARNA20.1-201ENST00000516009 A0A1B0GWB2 263 aa5.07□□□□□ -1.6
SCARNA20.1-201ENST00000516009 K7ERJ3 54 aa5.07□□□□□ -1.6
SCARNA20.1-201ENST00000516009 TAX1BP3O14907 124 aa5.07□□□□□ -1.6
SCARNA20.1-201ENST00000516009 COX17Q14061 63 aa5.07□□□□□ -1.6
SCARNA20.1-201ENST00000516009 HIGD2BQ4VC39 106 aa5.07□□□□□ -1.6
SCARNA20.1-201ENST00000516009 MIR7-3HGQ8N6C7 128 aa5.07□□□□□ -1.6
SCARNA20.1-201ENST00000516009 LINC00308Q8TCZ7 52 aa5.07□□□□□ -1.6
SCARNA20.1-201ENST00000516009 NTN5Q8WTR8 489 aaPredicted RBP5.07□□□□□ -1.6
SCARNA20.1-201ENST00000516009 RAB37Q96AX2 223 aa5.07□□□□□ -1.6
SCARNA20.1-201ENST00000516009 C2orf48Q96LS8 159 aa5.07□□□□□ -1.6
SCARNA20.1-201ENST00000516009 KRTAP1-5Q9BYS1 174 aa5.07□□□□□ -1.6
SCARNA20.1-201ENST00000516009 GVQW2A0A096LPI5 108 aaPredicted RBP5.06□□□□□ -1.6
SCARNA20.1-201ENST00000516009 NBDYA0A0U1RRE5 68 aa5.06□□□□□ -1.6
SCARNA20.1-201ENST00000516009 A0A1B0GV90 55 aa5.06□□□□□ -1.6
SCARNA20.1-201ENST00000516009 F8WDY8 70 aa5.06□□□□□ -1.6
SCARNA20.1-201ENST00000516009 C10orf25Q5T742 122 aa5.06□□□□□ -1.6
SCARNA20.1-201ENST00000516009 UNQ6190/PRO20217Q6UXQ8 127 aa5.06□□□□□ -1.6
SCARNA20.1-201ENST00000516009 CAMK2N2Q96S95 79 aa5.06□□□□□ -1.6
SCARNA20.1-201ENST00000516009 PPDPFQ9H3Y8 114 aa5.06□□□□□ -1.6
SCARNA20.1-201ENST00000516009 A0A0B4J2C4 111 aa5.05□□□□□ -1.6
SCARNA20.1-201ENST00000516009 TRBV30A0A0K0K1B3 111 aa5.05□□□□□ -1.6
SCARNA20.1-201ENST00000516009 USP17L23D6RBM5 183 aa5.05□□□□□ -1.6
SCARNA20.1-201ENST00000516009 PSCAO43653 123 aa5.05□□□□□ -1.6
SCARNA20.1-201ENST00000516009 CFC1BP0CG36 223 aa5.05□□□□□ -1.6
SCARNA20.1-201ENST00000516009 CFC1P0CG37 223 aa5.05□□□□□ -1.6
SCARNA20.1-201ENST00000516009 C9orf116Q5BN46 136 aaPredicted RBP5.05□□□□□ -1.6
SCARNA20.1-201ENST00000516009 SOSTDC1Q6X4U4 206 aa5.05□□□□□ -1.6
SCARNA20.1-201ENST00000516009 C9orf118A6NHY6 69 aa5.04□□□□□ -1.6
SCARNA20.1-201ENST00000516009 EIF4EBP3O60516 100 aaPredicted RBP5.04□□□□□ -1.6
SCARNA20.1-201ENST00000516009 CASC10Q5T4H9 136 aa5.04□□□□□ -1.6
SCARNA20.1-201ENST00000516009 C6orf48Q9UBA6 75 aa5.04□□□□□ -1.6
SCARNA20.1-201ENST00000516009 PRO1854Q9UHT4 67 aa5.04□□□□□ -1.6
SCARNA20.1-201ENST00000516009 DNAH10Q8IVF4 4471 aa5.04□□□□□ -1.6
SCARNA20.1-201ENST00000516009 C3orf84H3BNL1 204 aa5.03□□□□□ -1.6
SCARNA20.1-201ENST00000516009 H3BUT2 72 aa5.03□□□□□ -1.6
SCARNA20.1-201ENST00000516009 LECT2O14960 151 aa5.03□□□□□ -1.6
SCARNA20.1-201ENST00000516009 SYCNQ0VAF6 134 aa5.03□□□□□ -1.6
SCARNA20.1-201ENST00000516009 Q6ZRU5 148 aa5.03□□□□□ -1.6
SCARNA20.1-201ENST00000516009 SND1-IT1Q9HBX3 110 aa5.03□□□□□ -1.6
SCARNA20.1-201ENST00000516009 PGPEP1Q9NXJ5 209 aa5.03□□□□□ -1.6
SCARNA20.1-201ENST00000516009 M0R2N4 97 aa5.02□□□□□ -1.61
SCARNA20.1-201ENST00000516009 CARD19Q96LW7 228 aa5.02□□□□□ -1.61
SCARNA20.1-201ENST00000516009 NAA38Q9BRA0 125 aaKnown RBP5.02□□□□□ -1.61
SCARNA20.1-201ENST00000516009 LOC107984156A0A0G2JMH3 177 aa5.01□□□□□ -1.61
SCARNA20.1-201ENST00000516009 A0A1W2PPM0 123 aa5.01□□□□□ -1.61
SCARNA20.1-201ENST00000516009 H7C2G1 150 aa5.01□□□□□ -1.61
SCARNA20.1-201ENST00000516009 TSPAN13O95857 204 aa5.01□□□□□ -1.61
SCARNA20.1-201ENST00000516009 VAMP3Q15836 100 aa5.01□□□□□ -1.61
SCARNA20.1-201ENST00000516009 Q1RN00 199 aa5.01□□□□□ -1.61
SCARNA20.1-201ENST00000516009 RNF151Q2KHN1 245 aa5.01□□□□□ -1.61
SCARNA20.1-201ENST00000516009 C14orf177Q52M58 125 aa5.01□□□□□ -1.61
SCARNA20.1-201ENST00000516009 ARL17AQ8IVW1 177 aa5.01□□□□□ -1.61
SCARNA20.1-201ENST00000516009 ALMS1Q8TCU4 4167 aa5.01□□□□□ -1.61
SCARNA20.1-201ENST00000516009 NDUFC2-KCTD14E9PQ53 114 aa5□□□□□ -1.61
SCARNA20.1-201ENST00000516009 LY6G6CO95867 125 aa5□□□□□ -1.61
SCARNA20.1-201ENST00000516009 FABP2P12104 132 aa5□□□□□ -1.61
SCARNA20.1-201ENST00000516009 RPL13AP40429 203 aaKnown RBP5□□□□□ -1.61
SCARNA20.1-201ENST00000516009 LINC00476Q8WZB0 136 aa5□□□□□ -1.61
SCARNA20.1-201ENST00000516009 DNAH6Q9C0G6 4158 aa4.99□□□□□ -1.61
SCARNA20.1-201ENST00000516009 TRAV13-2A0A0B4J235 113 aa4.99□□□□□ -1.61
SCARNA20.1-201ENST00000516009 NDUFC2O95298 119 aa4.99□□□□□ -1.61
SCARNA20.1-201ENST00000516009 SLPIP03973 132 aa4.99□□□□□ -1.61
SCARNA20.1-201ENST00000516009 PSMB2P49721 201 aa4.99□□□□□ -1.61
SCARNA20.1-201ENST00000516009 WFDC2Q14508 124 aa4.99□□□□□ -1.61
SCARNA20.1-201ENST00000516009 LYRM7Q5U5X0 104 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms