RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 C3orf84H3BNL1 204 aa6.37□□□□□ -1.39
TPM3-222ENST00000515609 LINC00158P58513 81 aa6.37□□□□□ -1.39
TPM3-222ENST00000515609 C14orf177Q52M58 125 aa6.37□□□□□ -1.39
TPM3-222ENST00000515609 Q9HAA7 133 aa6.37□□□□□ -1.39
TPM3-222ENST00000515609 ERG28Q9UKR5 140 aa6.37□□□□□ -1.39
TPM3-222ENST00000515609 DNAH3Q8TD57 4116 aa6.36□□□□□ -1.39
TPM3-222ENST00000515609 GVQW2A0A096LPI5 108 aaPredicted RBP6.36□□□□□ -1.39
TPM3-222ENST00000515609 TRBV30A0A0K0K1B3 111 aa6.36□□□□□ -1.39
TPM3-222ENST00000515609 PSCAO43653 123 aa6.36□□□□□ -1.39
TPM3-222ENST00000515609 LYRM7Q5U5X0 104 aa6.36□□□□□ -1.39
TPM3-222ENST00000515609 PKIGQ9Y2B9 76 aa6.36□□□□□ -1.39
TPM3-222ENST00000515609 EREGO14944 169 aa6.35□□□□□ -1.39
TPM3-222ENST00000515609 KIAA0087Q14695 138 aa6.35□□□□□ -1.39
TPM3-222ENST00000515609 RAB37Q96AX2 223 aa6.35□□□□□ -1.39
TPM3-222ENST00000515609 CAMK2N2Q96S95 79 aa6.35□□□□□ -1.39
TPM3-222ENST00000515609 NHP2Q9NX24 153 aaKnown RBP6.35□□□□□ -1.39
TPM3-222ENST00000515609 A0A0B4J2C4 111 aa6.34□□□□□ -1.39
TPM3-222ENST00000515609 NBDYA0A0U1RRE5 68 aa6.34□□□□□ -1.39
TPM3-222ENST00000515609 FXYD2P54710 66 aa6.34□□□□□ -1.39
TPM3-222ENST00000515609 KRTAP26-1Q6PEX3 210 aa6.34□□□□□ -1.39
TPM3-222ENST00000515609 MUSTN1Q8IVN3 82 aa6.34□□□□□ -1.39
TPM3-222ENST00000515609 NTN5Q8WTR8 489 aaPredicted RBP6.34□□□□□ -1.39
TPM3-222ENST00000515609 LITAFQ99732 161 aa6.34□□□□□ -1.39
TPM3-222ENST00000515609 STAB2Q8WWQ8 2551 aa6.33□□□□□ -1.4
TPM3-222ENST00000515609 CMYA5Q8N3K9 4069 aa6.33□□□□□ -1.4
TPM3-222ENST00000515609 A0A1B0GWB2 263 aa6.33□□□□□ -1.4
TPM3-222ENST00000515609 RNF151Q2KHN1 245 aa6.33□□□□□ -1.4
TPM3-222ENST00000515609 LINC00308Q8TCZ7 52 aa6.33□□□□□ -1.4
TPM3-222ENST00000515609 PRO1854Q9UHT4 67 aa6.33□□□□□ -1.4
TPM3-222ENST00000515609 A4D1N5 150 aa6.32□□□□□ -1.4
TPM3-222ENST00000515609 PFN2P35080 140 aa6.32□□□□□ -1.4
TPM3-222ENST00000515609 ADAMTSL4-AS1Q5T5F5 129 aa6.32□□□□□ -1.4
TPM3-222ENST00000515609 MIR7-3HGQ8N6C7 128 aa6.32□□□□□ -1.4
TPM3-222ENST00000515609 TRAV13-2A0A0B4J235 113 aa6.31□□□□□ -1.4
TPM3-222ENST00000515609 SYCNQ0VAF6 134 aa6.31□□□□□ -1.4
TPM3-222ENST00000515609 C2orf82Q6UX34 121 aa6.31□□□□□ -1.4
TPM3-222ENST00000515609 CBY1Q9Y3M2 126 aa6.31□□□□□ -1.4
TPM3-222ENST00000515609 MEGF8Q7Z7M0 2845 aa6.31□□□□□ -1.4
TPM3-222ENST00000515609 LOC107984156A0A0G2JMH3 177 aa6.3□□□□□ -1.4
TPM3-222ENST00000515609 A0A0U1RRA0 63 aa6.3□□□□□ -1.4
TPM3-222ENST00000515609 C9orf118A6NHY6 69 aa6.3□□□□□ -1.4
TPM3-222ENST00000515609 USP17L23D6RBM5 183 aa6.3□□□□□ -1.4
TPM3-222ENST00000515609 NDUFC2O95298 119 aa6.3□□□□□ -1.4
TPM3-222ENST00000515609 COX6CP09669 75 aa6.3□□□□□ -1.4
TPM3-222ENST00000515609 FABP2P12104 132 aa6.3□□□□□ -1.4
TPM3-222ENST00000515609 ARL17AQ8IVW1 177 aa6.3□□□□□ -1.4
TPM3-222ENST00000515609 C15orf56Q8N910 161 aa6.3□□□□□ -1.4
TPM3-222ENST00000515609 SND1-IT1Q9HBX3 110 aa6.3□□□□□ -1.4
TPM3-222ENST00000515609 FBN3Q75N90 2809 aa6.3□□□□□ -1.4
TPM3-222ENST00000515609 CFC1BP0CG36 223 aa6.29□□□□□ -1.4
TPM3-222ENST00000515609 CFC1P0CG37 223 aa6.29□□□□□ -1.4
TPM3-222ENST00000515609 HIGD2BQ4VC39 106 aa6.29□□□□□ -1.4
TPM3-222ENST00000515609 UNQ6190/PRO20217Q6UXQ8 127 aa6.29□□□□□ -1.4
TPM3-222ENST00000515609 GTF2H5Q6ZYL4 71 aa6.29□□□□□ -1.4
TPM3-222ENST00000515609 CARD19Q96LW7 228 aa6.29□□□□□ -1.4
TPM3-222ENST00000515609 NDUFC2-KCTD14E9PQ53 114 aa6.28□□□□□ -1.4
TPM3-222ENST00000515609 TAX1BP3O14907 124 aa6.28□□□□□ -1.4
TPM3-222ENST00000515609 Q1RN00 199 aa6.28□□□□□ -1.4
TPM3-222ENST00000515609 CASC10Q5T4H9 136 aa6.28□□□□□ -1.4
TPM3-222ENST00000515609 DAND5Q8N907 189 aa6.28□□□□□ -1.4
TPM3-222ENST00000515609 COL7A1Q02388 2944 aa6.28□□□□□ -1.4
TPM3-222ENST00000515609 PSMB2P49721 201 aa6.27□□□□□ -1.41
TPM3-222ENST00000515609 VAMP3Q15836 100 aa6.27□□□□□ -1.41
TPM3-222ENST00000515609 C6orf223Q8N319 242 aa6.27□□□□□ -1.41
TPM3-222ENST00000515609 PGPEP1Q9NXJ5 209 aa6.27□□□□□ -1.41
TPM3-222ENST00000515609 TRBV20-1A0A075B6N2 111 aa6.26□□□□□ -1.41
TPM3-222ENST00000515609 H3BUT2 72 aa6.26□□□□□ -1.41
TPM3-222ENST00000515609 LY6G6CO95867 125 aa6.26□□□□□ -1.41
TPM3-222ENST00000515609 TLX1NBP0CAT3 122 aa6.26□□□□□ -1.41
TPM3-222ENST00000515609 NPC2P61916 151 aa6.26□□□□□ -1.41
TPM3-222ENST00000515609 C6orf48Q9UBA6 75 aa6.26□□□□□ -1.41
TPM3-222ENST00000515609 DNHD1Q96M86 4753 aa6.26□□□□□ -1.41
TPM3-222ENST00000515609 TRBV10-2A0A0K0K1G8 114 aa6.25□□□□□ -1.41
TPM3-222ENST00000515609 LOC107984640A0A0U1RRK4 108 aa6.25□□□□□ -1.41
TPM3-222ENST00000515609 A0A1W2PPM0 123 aa6.25□□□□□ -1.41
TPM3-222ENST00000515609 K7ERJ3 54 aa6.25□□□□□ -1.41
TPM3-222ENST00000515609 SNCGO76070 127 aa6.25□□□□□ -1.41
TPM3-222ENST00000515609 CNBPP62633 177 aaKnown RBP6.25□□□□□ -1.41
TPM3-222ENST00000515609 Q6ZRU5 148 aa6.25□□□□□ -1.41
TPM3-222ENST00000515609 A0A1B0GV90 55 aa6.24□□□□□ -1.41
TPM3-222ENST00000515609 GAGE10A6NGK3 116 aa6.24□□□□□ -1.41
TPM3-222ENST00000515609 SCGB1C2P0DMR2 95 aa6.24□□□□□ -1.41
TPM3-222ENST00000515609 C10orf25Q5T742 122 aa6.24□□□□□ -1.41
TPM3-222ENST00000515609 C1orf134Q5TEV5 83 aa6.24□□□□□ -1.41
TPM3-222ENST00000515609 LINC00476Q8WZB0 136 aa6.24□□□□□ -1.41
TPM3-222ENST00000515609 LINC00526Q96FQ7 95 aa6.24□□□□□ -1.41
TPM3-222ENST00000515609 KRTAP1-5Q9BYS1 174 aa6.24□□□□□ -1.41
TPM3-222ENST00000515609 TMEM126AQ9H061 195 aa6.24□□□□□ -1.41
TPM3-222ENST00000515609 TSPAN13O95857 204 aa6.23□□□□□ -1.41
TPM3-222ENST00000515609 RPL13AP40429 203 aaKnown RBP6.23□□□□□ -1.41
TPM3-222ENST00000515609 C9orf116Q5BN46 136 aaPredicted RBP6.23□□□□□ -1.41
TPM3-222ENST00000515609 SOSTDC1Q6X4U4 206 aa6.23□□□□□ -1.41
TPM3-222ENST00000515609 Q6ZR54 194 aa6.23□□□□□ -1.41
TPM3-222ENST00000515609 LINC00474Q9P2X8 69 aa6.23□□□□□ -1.41
TPM3-222ENST00000515609 HUWE1Q7Z6Z7 4374 aaKnown RBP6.22□□□□□ -1.41
TPM3-222ENST00000515609 S100A7L2Q5SY68 101 aa6.22□□□□□ -1.41
TPM3-222ENST00000515609 OR13C6PQ8NH95 151 aa6.22□□□□□ -1.41
TPM3-222ENST00000515609 SPCS1Q9Y6A9 102 aa6.22□□□□□ -1.41
TPM3-222ENST00000515609 H0YGX0 51 aa6.21□□□□□ -1.42
TPM3-222ENST00000515609 H7C2G1 150 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms