RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 TRAV13-2A0A0B4J235 113 aa9□□□□□ -0.97
PHF3-212ENST00000515594 MRPL23Q16540 153 aaKnown RBP9□□□□□ -0.97
PHF3-212ENST00000515594 C19orf73Q9NVV2 129 aa9□□□□□ -0.97
PHF3-212ENST00000515594 IGLV10-54A0A075B6I4 117 aa8.99□□□□□ -0.97
PHF3-212ENST00000515594 LINC00643Q86TS7 51 aa8.99□□□□□ -0.97
PHF3-212ENST00000515594 CSNK1G2-AS1Q8NCQ2 148 aa8.99□□□□□ -0.97
PHF3-212ENST00000515594 LINC01006Q8NI28 216 aa8.99□□□□□ -0.97
PHF3-212ENST00000515594 C16orf74Q96GX8 76 aa8.99□□□□□ -0.97
PHF3-212ENST00000515594 OTOGQ6ZRI0 2925 aa8.98□□□□□ -0.97
PHF3-212ENST00000515594 C9orf116Q5BN46 136 aaPredicted RBP8.98□□□□□ -0.97
PHF3-212ENST00000515594 C6orf226Q5I0X4 101 aa8.98□□□□□ -0.97
PHF3-212ENST00000515594 COPS9Q8WXC6 57 aa8.98□□□□□ -0.97
PHF3-212ENST00000515594 LINC00846Q9NV44 126 aa8.97□□□□□ -0.97
PHF3-212ENST00000515594 ATRQ13535 2644 aa8.97□□□□□ -0.97
PHF3-212ENST00000515594 HECTD1Q9ULT8 2610 aa8.97□□□□□ -0.97
PHF3-212ENST00000515594 TRAV25A0A0B4J276 109 aa8.97□□□□□ -0.97
PHF3-212ENST00000515594 LINC00959A0A1B0GUT2 108 aa8.97□□□□□ -0.97
PHF3-212ENST00000515594 TRBV6-4A0A1B0GX49 114 aa8.97□□□□□ -0.97
PHF3-212ENST00000515594 CYSTM1Q9H1C7 97 aa8.97□□□□□ -0.97
PHF3-212ENST00000515594 HIVEP1P15822 2718 aa8.96□□□□□ -0.97
PHF3-212ENST00000515594 GYPEP15421 78 aa8.96□□□□□ -0.97
PHF3-212ENST00000515594 LRRC75A-AS1Q8N1F1 130 aa8.96□□□□□ -0.97
PHF3-212ENST00000515594 ACYP1P07311 99 aa8.96□□□□□ -0.98
PHF3-212ENST00000515594 RNASE1P07998 156 aaKnown RBP8.96□□□□□ -0.98
PHF3-212ENST00000515594 SVIPQ8NHG7 77 aa8.96□□□□□ -0.98
PHF3-212ENST00000515594 SPATA3Q8NHX4 192 aa8.96□□□□□ -0.98
PHF3-212ENST00000515594 LINC00526Q96FQ7 95 aa8.96□□□□□ -0.98
PHF3-212ENST00000515594 C9orf153Q5TBE3 101 aa8.96□□□□□ -0.98
PHF3-212ENST00000515594 UNC79Q9P2D8 2635 aa8.95□□□□□ -0.98
PHF3-212ENST00000515594 A0A087WZ39 114 aa8.95□□□□□ -0.98
PHF3-212ENST00000515594 ZNF843Q8N446 348 aa8.95□□□□□ -0.98
PHF3-212ENST00000515594 WFDC9Q8NEX5 89 aa8.95□□□□□ -0.98
PHF3-212ENST00000515594 TEP1Q99973 2627 aaKnown RBP8.95□□□□□ -0.98
PHF3-212ENST00000515594 IGLV1-51P01701 117 aa8.93□□□□□ -0.98
PHF3-212ENST00000515594 INAFM2P0DMQ5 153 aa8.93□□□□□ -0.98
PHF3-212ENST00000515594 FAM222AQ5U5X8 452 aa8.93□□□□□ -0.98
PHF3-212ENST00000515594 LINC00482Q8N8I6 264 aa8.93□□□□□ -0.98
PHF3-212ENST00000515594 Q8NDZ9 215 aa8.93□□□□□ -0.98
PHF3-212ENST00000515594 CXCL5P42830 114 aa8.93□□□□□ -0.98
PHF3-212ENST00000515594 SS18Q15532 418 aa8.93□□□□□ -0.98
PHF3-212ENST00000515594 IBA57-AS1B1ANH7 110 aa8.92□□□□□ -0.98
PHF3-212ENST00000515594 OVOL2Q9BRP0 275 aa8.92□□□□□ -0.98
PHF3-212ENST00000515594 LOC107984640A0A0U1RRK4 108 aa8.91□□□□□ -0.98
PHF3-212ENST00000515594 PF4P02776 101 aa8.91□□□□□ -0.98
PHF3-212ENST00000515594 SMR3AQ99954 134 aa8.91□□□□□ -0.98
PHF3-212ENST00000515594 PPDPFQ9H3Y8 114 aa8.91□□□□□ -0.98
PHF3-212ENST00000515594 LINC00269Q8N2A0 174 aa8.91□□□□□ -0.98
PHF3-212ENST00000515594 NANOS2P60321 138 aaKnown RBP8.9□□□□□ -0.98
PHF3-212ENST00000515594 C3orf22Q8N5N4 141 aa8.9□□□□□ -0.98
PHF3-212ENST00000515594 IMUPQ9GZP8 106 aa8.9□□□□□ -0.98
PHF3-212ENST00000515594 hADV29S1A0JD25 119 aa8.89□□□□□ -0.99
PHF3-212ENST00000515594 HILS1P60008 231 aa8.89□□□□□ -0.99
PHF3-212ENST00000515594 C6orf223Q8N319 242 aa8.88□□□□□ -0.99
PHF3-212ENST00000515594 C2orf48Q96LS8 159 aa8.88□□□□□ -0.99
PHF3-212ENST00000515594 KRTAP10-3P60369 221 aa8.87□□□□□ -0.99
PHF3-212ENST00000515594 HIST1H4AP62805 103 aaKnown RBP8.87□□□□□ -0.99
PHF3-212ENST00000515594 KRTAP1-1Q07627 177 aa8.87□□□□□ -0.99
PHF3-212ENST00000515594 FAM110AQ9BQ89 295 aa8.87□□□□□ -0.99
PHF3-212ENST00000515594 H0YGX0 51 aa8.87□□□□□ -0.99
PHF3-212ENST00000515594 A0A1B0GX51 115 aa8.86□□□□□ -0.99
PHF3-212ENST00000515594 LINC01561Q8N1V8 128 aa8.86□□□□□ -0.99
PHF3-212ENST00000515594 TMEM86BQ8N661 226 aa8.86□□□□□ -0.99
PHF3-212ENST00000515594 ANGP03950 147 aaKnown RBP8.86□□□□□ -0.99
PHF3-212ENST00000515594 UQCRQO14949 82 aa8.86□□□□□ -0.99
PHF3-212ENST00000515594 DEFB135Q30KP9 77 aa8.86□□□□□ -0.99
PHF3-212ENST00000515594 C10orf25Q5T742 122 aa8.86□□□□□ -0.99
PHF3-212ENST00000515594 ORMDL1Q9P0S3 153 aa8.86□□□□□ -0.99
PHF3-212ENST00000515594 FLNBO75369 2602 aaKnown RBP8.86□□□□□ -0.99
PHF3-212ENST00000515594 CFAP161Q6P656 301 aa8.85□□□□□ -0.99
PHF3-212ENST00000515594 X6R8D5 127 aa8.85□□□□□ -0.99
PHF3-212ENST00000515594 HTN3P15516 51 aa8.85□□□□□ -0.99
PHF3-212ENST00000515594 C6orf99Q4VX62 202 aa8.85□□□□□ -0.99
PHF3-212ENST00000515594 OBSCN-AS1Q96MR7 158 aa8.84□□□□□ -0.99
PHF3-212ENST00000515594 COX7CP15954 63 aa8.84□□□□□ -0.99
PHF3-212ENST00000515594 CHCHD10Q8WYQ3 142 aaPredicted RBP8.84□□□□□ -0.99
PHF3-212ENST00000515594 M0R2N4 97 aa8.84□□□□□ -0.99
PHF3-212ENST00000515594 KIAA0087Q14695 138 aa8.84□□□□□ -0.99
PHF3-212ENST00000515594 LY6G6DO95868 133 aa8.83□□□□□ -1
PHF3-212ENST00000515594 FAM19A1Q7Z5A9 133 aa8.83□□□□□ -1
PHF3-212ENST00000515594 Q8IZM0 81 aa8.82□□□□□ -1
PHF3-212ENST00000515594 Q8N814 137 aa8.82□□□□□ -1
PHF3-212ENST00000515594 KIR2DL5BQ8NHK3 375 aa8.82□□□□□ -1
PHF3-212ENST00000515594 UNQ6190/PRO20217Q6UXQ8 127 aa8.82□□□□□ -1
PHF3-212ENST00000515594 RPL18AQ02543 176 aaKnown RBP8.82□□□□□ -1
PHF3-212ENST00000515594 PRO0255Q9UI72 69 aa8.82□□□□□ -1
PHF3-212ENST00000515594 TMEM126AQ9H061 195 aa8.81□□□□□ -1
PHF3-212ENST00000515594 CELA1Q9UNI1 258 aa8.81□□□□□ -1
PHF3-212ENST00000515594 NSD1Q96L73 2696 aaPredicted RBP8.81□□□□□ -1
PHF3-212ENST00000515594 TRAV23DV6A0A075B6W5 121 aa8.81□□□□□ -1
PHF3-212ENST00000515594 REG3AQ06141 175 aa8.81□□□□□ -1
PHF3-212ENST00000515594 USP17L23D6RBM5 183 aa8.8□□□□□ -1
PHF3-212ENST00000515594 Q6JHZ5 121 aa8.79□□□□□ -1
PHF3-212ENST00000515594 ENHOQ6UWT2 76 aa8.79□□□□□ -1
PHF3-212ENST00000515594 ATOX1O00244 68 aa8.79□□□□□ -1
PHF3-212ENST00000515594 CCKP06307 115 aa8.79□□□□□ -1
PHF3-212ENST00000515594 TENM3Q9P273 2699 aa8.79□□□□□ -1
PHF3-212ENST00000515594 A0A1B0GUV1 79 aa8.78□□□□□ -1
PHF3-212ENST00000515594 S100A7L2Q5SY68 101 aa8.78□□□□□ -1
PHF3-212ENST00000515594 XAGE1AQ9HD64 81 aa8.78□□□□□ -1
PHF3-212ENST00000515594 CMC4P56277 68 aaPredicted RBP8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms