RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 SGK494Q96LW2 274 aa7.51□□□□□ -1.21
CSF1R-208ENST00000515239 IGHV3-73A0A0B4J1V6 119 aa7.5□□□□□ -1.21
CSF1R-208ENST00000515239 SNCGO76070 127 aa7.5□□□□□ -1.21
CSF1R-208ENST00000515239 NPYP01303 97 aa7.5□□□□□ -1.21
CSF1R-208ENST00000515239 IGLC6P0CF74 106 aa7.5□□□□□ -1.21
CSF1R-208ENST00000515239 C14orf177Q52M58 125 aa7.5□□□□□ -1.21
CSF1R-208ENST00000515239 C20orf78Q9BR46 151 aa7.5□□□□□ -1.21
CSF1R-208ENST00000515239 KLK12Q9UKR0 248 aa7.5□□□□□ -1.21
CSF1R-208ENST00000515239 MUC2Q02817 5179 aa7.49□□□□□ -1.21
CSF1R-208ENST00000515239 A0A0J9YXV3 536 aa7.49□□□□□ -1.21
CSF1R-208ENST00000515239 SRSF9Q13242 221 aaKnown RBP eCLIP7.49□□□□□ -1.21
CSF1R-208ENST00000515239 DGAT2L7PQ6IED9 249 aa7.49□□□□□ -1.21
CSF1R-208ENST00000515239 SCGB1D4Q6XE38 83 aa7.49□□□□□ -1.21
CSF1R-208ENST00000515239 UBE2WQ96B02 151 aa7.49□□□□□ -1.21
CSF1R-208ENST00000515239 NAA38Q9BRA0 125 aaKnown RBP7.49□□□□□ -1.21
CSF1R-208ENST00000515239 LINC00694P0DN24 101 aa7.48□□□□□ -1.21
CSF1R-208ENST00000515239 GAGE2BQ13066 116 aa7.48□□□□□ -1.21
CSF1R-208ENST00000515239 CIRBPQ14011 172 aaKnown RBP7.48□□□□□ -1.21
CSF1R-208ENST00000515239 ZNF876PQ49A33 203 aa7.48□□□□□ -1.21
CSF1R-208ENST00000515239 GAGE2EQ4V326 116 aa7.48□□□□□ -1.21
CSF1R-208ENST00000515239 Q6ZUT4 128 aa7.48□□□□□ -1.21
CSF1R-208ENST00000515239 GAGE2DQ9UEU5 116 aa7.48□□□□□ -1.21
CSF1R-208ENST00000515239 TP73-AS1Q9UF72 201 aa7.48□□□□□ -1.21
CSF1R-208ENST00000515239 Q9UF83 564 aa7.48□□□□□ -1.21
CSF1R-208ENST00000515239 TRBV7-3A0A075B6L6 115 aa7.47□□□□□ -1.21
CSF1R-208ENST00000515239 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.47□□□□□ -1.21
CSF1R-208ENST00000515239 PRO0461Q9UI25 63 aa7.47□□□□□ -1.21
CSF1R-208ENST00000515239 GAGE12JA6NER3 117 aa7.46□□□□□ -1.22
CSF1R-208ENST00000515239 USP17L23D6RBM5 183 aa7.46□□□□□ -1.22
CSF1R-208ENST00000515239 M0R381 172 aa7.46□□□□□ -1.22
CSF1R-208ENST00000515239 GAGE4Q13068 117 aa7.46□□□□□ -1.22
CSF1R-208ENST00000515239 SCGB3A1Q96QR1 104 aa7.46□□□□□ -1.22
CSF1R-208ENST00000515239 LENEPQ9Y5L5 61 aa7.46□□□□□ -1.22
CSF1R-208ENST00000515239 LOC107984156A0A0G2JMH3 177 aa7.45□□□□□ -1.22
CSF1R-208ENST00000515239 K7ERJ3 54 aa7.45□□□□□ -1.22
CSF1R-208ENST00000515239 PSMB2P49721 201 aa7.45□□□□□ -1.22
CSF1R-208ENST00000515239 ARL17AQ8IVW1 177 aa7.45□□□□□ -1.22
CSF1R-208ENST00000515239 TMEM126AQ9H061 195 aa7.45□□□□□ -1.22
CSF1R-208ENST00000515239 MRPL35Q9NZE8 188 aaKnown RBP7.45□□□□□ -1.22
CSF1R-208ENST00000515239 FAT4Q6V0I7 4981 aa7.45□□□□□ -1.22
CSF1R-208ENST00000515239 A0A087WYN8 130 aa7.44□□□□□ -1.22
CSF1R-208ENST00000515239 TMSB15BA0A087X1C1 80 aa7.44□□□□□ -1.22
CSF1R-208ENST00000515239 IFITM1P13164 125 aa7.44□□□□□ -1.22
CSF1R-208ENST00000515239 CRIP1P50238 77 aa7.44□□□□□ -1.22
CSF1R-208ENST00000515239 UBE2D3P61077 147 aa7.44□□□□□ -1.22
CSF1R-208ENST00000515239 UBE2D2P62837 147 aa7.44□□□□□ -1.22
CSF1R-208ENST00000515239 LCE2AQ5TA79 106 aaPredicted RBP7.44□□□□□ -1.22
CSF1R-208ENST00000515239 SPANXN1Q5VSR9 72 aa7.44□□□□□ -1.22
CSF1R-208ENST00000515239 ENHOQ6UWT2 76 aa7.44□□□□□ -1.22
CSF1R-208ENST00000515239 TOMM6Q96B49 74 aa7.44□□□□□ -1.22
CSF1R-208ENST00000515239 RNF185Q96GF1 192 aa7.44□□□□□ -1.22
CSF1R-208ENST00000515239 TMEM141Q96I45 108 aa7.44□□□□□ -1.22
CSF1R-208ENST00000515239 ZNF815PA8K554 130 aa7.43□□□□□ -1.22
CSF1R-208ENST00000515239 COX6CP09669 75 aa7.43□□□□□ -1.22
CSF1R-208ENST00000515239 UBE2D1P51668 147 aa7.43□□□□□ -1.22
CSF1R-208ENST00000515239 RPL32P62910 135 aaKnown RBP7.43□□□□□ -1.22
CSF1R-208ENST00000515239 ATXN8Q156A1 80 aa7.43□□□□□ -1.22
CSF1R-208ENST00000515239 DPH3Q96FX2 82 aa7.43□□□□□ -1.22
CSF1R-208ENST00000515239 SMIM2Q9BVW6 85 aa7.43□□□□□ -1.22
CSF1R-208ENST00000515239 C1orf43Q9BWL3 253 aa7.43□□□□□ -1.22
CSF1R-208ENST00000515239 IGKV2D-26A0A0A0MRZ7 120 aa7.42□□□□□ -1.22
CSF1R-208ENST00000515239 TRAV21A0A0B4J279 112 aa7.42□□□□□ -1.22
CSF1R-208ENST00000515239 RPL13AP40429 203 aaKnown RBP7.42□□□□□ -1.22
CSF1R-208ENST00000515239 PTH2Q96A98 100 aa7.42□□□□□ -1.22
CSF1R-208ENST00000515239 CDIP1Q9H305 208 aa7.42□□□□□ -1.22
CSF1R-208ENST00000515239 PRO1854Q9UHT4 67 aa7.42□□□□□ -1.22
CSF1R-208ENST00000515239 KIF25-AS1Q9Y6Z4 181 aa7.42□□□□□ -1.22
CSF1R-208ENST00000515239 RHODO00212 210 aa7.41□□□□□ -1.22
CSF1R-208ENST00000515239 ACYP1P07311 99 aa7.41□□□□□ -1.22
CSF1R-208ENST00000515239 COPS9Q8WXC6 57 aa7.41□□□□□ -1.22
CSF1R-208ENST00000515239 C9orf85Q96MD7 179 aa7.41□□□□□ -1.22
CSF1R-208ENST00000515239 CHCHD7Q9BUK0 85 aa7.41□□□□□ -1.22
CSF1R-208ENST00000515239 CHTF8P0CG12 524 aa7.4□□□□□ -1.22
CSF1R-208ENST00000515239 ZFP2Q6ZN57 461 aa7.4□□□□□ -1.22
CSF1R-208ENST00000515239 PLAC8Q9NZF1 115 aa7.4□□□□□ -1.22
CSF1R-208ENST00000515239 C11orf21Q9P2W6 132 aa7.4□□□□□ -1.22
CSF1R-208ENST00000515239 TRAV8-4A0A0B4J246 113 aa7.39□□□□□ -1.23
CSF1R-208ENST00000515239 A0A0B4J2C4 111 aa7.39□□□□□ -1.23
CSF1R-208ENST00000515239 A0A0U1RQV1 116 aa7.39□□□□□ -1.23
CSF1R-208ENST00000515239 FAM240AA0A1B0GVK7 77 aa7.39□□□□□ -1.23
CSF1R-208ENST00000515239 SMKR1H3BMG3 65 aa7.39□□□□□ -1.23
CSF1R-208ENST00000515239 LGALS3P17931 250 aaKnown RBP7.39□□□□□ -1.23
CSF1R-208ENST00000515239 SUMO2P61956 95 aaKnown RBP7.39□□□□□ -1.23
CSF1R-208ENST00000515239 C14orf178Q8N769 122 aaPredicted RBP7.39□□□□□ -1.23
CSF1R-208ENST00000515239 NEXN-AS1Q8NBZ9 246 aa7.39□□□□□ -1.23
CSF1R-208ENST00000515239 C11orf86A6NJI1 115 aa7.38□□□□□ -1.23
CSF1R-208ENST00000515239 H3BVH4 76 aa7.38□□□□□ -1.23
CSF1R-208ENST00000515239 SLC25A20O43772 301 aa7.38□□□□□ -1.23
CSF1R-208ENST00000515239 MT-ATP8P03928 68 aa7.38□□□□□ -1.23
CSF1R-208ENST00000515239 NDUFV3P56181 108 aaKnown RBP7.38□□□□□ -1.23
CSF1R-208ENST00000515239 CNBPP62633 177 aaKnown RBP7.38□□□□□ -1.23
CSF1R-208ENST00000515239 PRR3P79522 188 aaKnown RBP7.38□□□□□ -1.23
CSF1R-208ENST00000515239 KRTAP26-1Q6PEX3 210 aa7.38□□□□□ -1.23
CSF1R-208ENST00000515239 REG3GQ6UW15 175 aa7.38□□□□□ -1.23
CSF1R-208ENST00000515239 SPINK6Q6UWN8 80 aa7.38□□□□□ -1.23
CSF1R-208ENST00000515239 SPACA4Q8TDM5 124 aa7.38□□□□□ -1.23
CSF1R-208ENST00000515239 C7orf33Q8WU49 177 aa7.38□□□□□ -1.23
CSF1R-208ENST00000515239 PLEKHB2Q96CS7 222 aa7.38□□□□□ -1.23
CSF1R-208ENST00000515239 TIMM17AQ99595 171 aa7.38□□□□□ -1.23
CSF1R-208ENST00000515239 KIR2DL4Q99706 377 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms