RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 KMT2CQ8NEZ4 4911 aaKnown RBP13.16□□□□□ -0.3
SSBP2-218ENST00000514493 PRSS2P07478 247 aa13.16□□□□□ -0.3
SSBP2-218ENST00000514493 TTC32Q5I0X7 151 aa13.16□□□□□ -0.3
SSBP2-218ENST00000514493 APOMO95445 188 aa13.15□□□□□ -0.3
SSBP2-218ENST00000514493 RMI2Q96E14 147 aa13.15□□□□□ -0.3
SSBP2-218ENST00000514493 SPANXDQ9BXN6 97 aa13.15□□□□□ -0.3
SSBP2-218ENST00000514493 SPANXCQ9NY87 97 aa13.15□□□□□ -0.3
SSBP2-218ENST00000514493 CIRBPQ14011 172 aaKnown RBP13.15□□□□□ -0.31
SSBP2-218ENST00000514493 C6orf226Q5I0X4 101 aa13.15□□□□□ -0.31
SSBP2-218ENST00000514493 ALMS1Q8TCU4 4167 aa13.14□□□□□ -0.31
SSBP2-218ENST00000514493 NBDYA0A0U1RRE5 68 aa13.14□□□□□ -0.31
SSBP2-218ENST00000514493 Q6ZVH6 145 aa13.14□□□□□ -0.31
SSBP2-218ENST00000514493 TMEM238LA0A1B0GVL6 79 aa13.13□□□□□ -0.31
SSBP2-218ENST00000514493 A6NJY4 79 aa13.13□□□□□ -0.31
SSBP2-218ENST00000514493 ADAMTSL4-AS1Q5T5F5 129 aa13.13□□□□□ -0.31
SSBP2-218ENST00000514493 MEIG1Q5JSS6 88 aa13.12□□□□□ -0.31
SSBP2-218ENST00000514493 CXCL5P42830 114 aa13.12□□□□□ -0.31
SSBP2-218ENST00000514493 KIAA0087Q14695 138 aa13.12□□□□□ -0.31
SSBP2-218ENST00000514493 CFAP161Q6P656 301 aa13.11□□□□□ -0.31
SSBP2-218ENST00000514493 NHP2Q9NX24 153 aaKnown RBP13.11□□□□□ -0.31
SSBP2-218ENST00000514493 DNAH6Q9C0G6 4158 aa13.1□□□□□ -0.31
SSBP2-218ENST00000514493 CKS1BP61024 79 aa13.09□□□□□ -0.31
SSBP2-218ENST00000514493 SPAG11BQ08648 103 aa13.09□□□□□ -0.31
SSBP2-218ENST00000514493 LINC00476Q8WZB0 136 aa13.09□□□□□ -0.31
SSBP2-218ENST00000514493 COX11Q9Y6N1 276 aa13.09□□□□□ -0.31
SSBP2-218ENST00000514493 SACSQ9NZJ4 4579 aa13.09□□□□□ -0.31
SSBP2-218ENST00000514493 TAX1BP3O14907 124 aa13.09□□□□□ -0.31
SSBP2-218ENST00000514493 MUSTN1Q8IVN3 82 aa13.09□□□□□ -0.31
SSBP2-218ENST00000514493 A0A1B0GV90 55 aa13.08□□□□□ -0.32
SSBP2-218ENST00000514493 RPL24P83731 157 aaKnown RBP13.08□□□□□ -0.32
SSBP2-218ENST00000514493 A0A1B0GWB2 263 aa13.07□□□□□ -0.32
SSBP2-218ENST00000514493 SMIM13P0DJ93 91 aa13.07□□□□□ -0.32
SSBP2-218ENST00000514493 IFITM1P13164 125 aa13.07□□□□□ -0.32
SSBP2-218ENST00000514493 C2orf82Q6UX34 121 aa13.07□□□□□ -0.32
SSBP2-218ENST00000514493 A0A0U1RRA0 63 aa13.07□□□□□ -0.32
SSBP2-218ENST00000514493 K7ERJ3 54 aa13.07□□□□□ -0.32
SSBP2-218ENST00000514493 DAND5Q8N907 189 aa13.07□□□□□ -0.32
SSBP2-218ENST00000514493 C15orf56Q8N910 161 aa13.07□□□□□ -0.32
SSBP2-218ENST00000514493 LY6G6CO95867 125 aa13.06□□□□□ -0.32
SSBP2-218ENST00000514493 HYDINQ4G0P3 5121 aa13.05□□□□□ -0.32
SSBP2-218ENST00000514493 A4D1N5 150 aa13.04□□□□□ -0.32
SSBP2-218ENST00000514493 COPS9Q8WXC6 57 aa13.04□□□□□ -0.32
SSBP2-218ENST00000514493 ERG28Q9UKR5 140 aa13.04□□□□□ -0.32
SSBP2-218ENST00000514493 KMT2AQ03164 3969 aa13.04□□□□□ -0.32
SSBP2-218ENST00000514493 NPC2P61916 151 aa13.04□□□□□ -0.32
SSBP2-218ENST00000514493 LINC00308Q8TCZ7 52 aa13.03□□□□□ -0.32
SSBP2-218ENST00000514493 RAB37Q96AX2 223 aa13.03□□□□□ -0.32
SSBP2-218ENST00000514493 DNAH10Q8IVF4 4471 aa13.03□□□□□ -0.32
SSBP2-218ENST00000514493 GVQW2A0A096LPI5 108 aaPredicted RBP13.02□□□□□ -0.32
SSBP2-218ENST00000514493 LINC00158P58513 81 aa13.02□□□□□ -0.32
SSBP2-218ENST00000514493 Q6ZR54 194 aa13.02□□□□□ -0.32
SSBP2-218ENST00000514493 M0R2N4 97 aa13.02□□□□□ -0.33
SSBP2-218ENST00000514493 HIGD2BQ4VC39 106 aa13.02□□□□□ -0.33
SSBP2-218ENST00000514493 C6orf223Q8N319 242 aa13.02□□□□□ -0.33
SSBP2-218ENST00000514493 MIR7-3HGQ8N6C7 128 aa13.02□□□□□ -0.33
SSBP2-218ENST00000514493 PPDPFQ9H3Y8 114 aa13.02□□□□□ -0.33
SSBP2-218ENST00000514493 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.01□□□□□ -0.33
SSBP2-218ENST00000514493 PFN2P35080 140 aa13.01□□□□□ -0.33
SSBP2-218ENST00000514493 NTN5Q8WTR8 489 aaPredicted RBP13.01□□□□□ -0.33
SSBP2-218ENST00000514493 RYR3Q15413 4870 aa13□□□□□ -0.33
SSBP2-218ENST00000514493 USP17L23D6RBM5 183 aa13□□□□□ -0.33
SSBP2-218ENST00000514493 ZNF561-AS1K7EIQ3 104 aa13□□□□□ -0.33
SSBP2-218ENST00000514493 CFC1BP0CG36 223 aa13□□□□□ -0.33
SSBP2-218ENST00000514493 CFC1P0CG37 223 aa13□□□□□ -0.33
SSBP2-218ENST00000514493 LINC00526Q96FQ7 95 aa13□□□□□ -0.33
SSBP2-218ENST00000514493 C9orf118A6NHY6 69 aa12.99□□□□□ -0.33
SSBP2-218ENST00000514493 PSCAO43653 123 aa12.99□□□□□ -0.33
SSBP2-218ENST00000514493 EIF4EBP3O60516 100 aaPredicted RBP12.99□□□□□ -0.33
SSBP2-218ENST00000514493 COX17Q14061 63 aa12.99□□□□□ -0.33
SSBP2-218ENST00000514493 A0A0B4J2C4 111 aa12.99□□□□□ -0.33
SSBP2-218ENST00000514493 UNQ6190/PRO20217Q6UXQ8 127 aa12.99□□□□□ -0.33
SSBP2-218ENST00000514493 SOSTDC1Q6X4U4 206 aa12.99□□□□□ -0.33
SSBP2-218ENST00000514493 Q6ZRN7 208 aaPredicted RBP12.99□□□□□ -0.33
SSBP2-218ENST00000514493 RYR2Q92736 4967 aa12.98□□□□□ -0.33
SSBP2-218ENST00000514493 C10orf25Q5T742 122 aa12.97□□□□□ -0.33
SSBP2-218ENST00000514493 C2orf48Q96LS8 159 aa12.97□□□□□ -0.33
SSBP2-218ENST00000514493 LCE6AA0A183 80 aa12.95□□□□□ -0.34
SSBP2-218ENST00000514493 H3BUT2 72 aa12.95□□□□□ -0.34
SSBP2-218ENST00000514493 CAMK2N2Q96S95 79 aa12.95□□□□□ -0.34
SSBP2-218ENST00000514493 F8WDY8 70 aa12.94□□□□□ -0.34
SSBP2-218ENST00000514493 LECT2O14960 151 aa12.94□□□□□ -0.34
SSBP2-218ENST00000514493 C9orf116Q5BN46 136 aaPredicted RBP12.94□□□□□ -0.34
SSBP2-218ENST00000514493 PRO1854Q9UHT4 67 aa12.94□□□□□ -0.34
SSBP2-218ENST00000514493 WFDC2Q14508 124 aa12.94□□□□□ -0.34
SSBP2-218ENST00000514493 NAA38Q9BRA0 125 aaKnown RBP12.94□□□□□ -0.34
SSBP2-218ENST00000514493 PGPEP1Q9NXJ5 209 aa12.94□□□□□ -0.34
SSBP2-218ENST00000514493 TRBV30A0A0K0K1B3 111 aa12.93□□□□□ -0.34
SSBP2-218ENST00000514493 C6orf48Q9UBA6 75 aa12.93□□□□□ -0.34
SSBP2-218ENST00000514493 A0A1W2PPM0 123 aa12.91□□□□□ -0.34
SSBP2-218ENST00000514493 TSPAN13O95857 204 aa12.91□□□□□ -0.34
SSBP2-218ENST00000514493 Q6ZRU5 148 aa12.91□□□□□ -0.34
SSBP2-218ENST00000514493 DNAH2Q9P225 4427 aa12.91□□□□□ -0.34
SSBP2-218ENST00000514493 SND1-IT1Q9HBX3 110 aa12.9□□□□□ -0.34
SSBP2-218ENST00000514493 LRCOL1A6NCL2 159 aa12.89□□□□□ -0.35
SSBP2-218ENST00000514493 SYCNQ0VAF6 134 aa12.89□□□□□ -0.35
SSBP2-218ENST00000514493 VAMP3Q15836 100 aa12.89□□□□□ -0.35
SSBP2-218ENST00000514493 C14orf177Q52M58 125 aa12.89□□□□□ -0.35
SSBP2-218ENST00000514493 LOC107984156A0A0G2JMH3 177 aa12.89□□□□□ -0.35
SSBP2-218ENST00000514493 C1orf134Q5TEV5 83 aa12.89□□□□□ -0.35
SSBP2-218ENST00000514493 ARL17AQ8IVW1 177 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms