RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 BPY2O14599 106 aa9.4□□□□□ -0.9
TCOF1-213ENST00000514442 SOSTDC1Q6X4U4 206 aa9.4□□□□□ -0.9
TCOF1-213ENST00000514442 C1orf158Q8N1D5 194 aa9.4□□□□□ -0.9
TCOF1-213ENST00000514442 TRBV7-6A0A0J9YX20 115 aa9.4□□□□□ -0.91
TCOF1-213ENST00000514442 A0A0J9YWU9 116 aa9.39□□□□□ -0.91
TCOF1-213ENST00000514442 COX7BP24311 80 aa9.39□□□□□ -0.91
TCOF1-213ENST00000514442 FAM19A4Q96LR4 140 aa9.39□□□□□ -0.91
TCOF1-213ENST00000514442 PTPRBP23467 1997 aa9.39□□□□□ -0.91
TCOF1-213ENST00000514442 TRAV10A0A0B4J240 114 aa9.39□□□□□ -0.91
TCOF1-213ENST00000514442 LINC00315P59091 139 aa9.39□□□□□ -0.91
TCOF1-213ENST00000514442 C6orf99Q4VX62 202 aa9.39□□□□□ -0.91
TCOF1-213ENST00000514442 EPG5Q9HCE0 2579 aa9.38□□□□□ -0.91
TCOF1-213ENST00000514442 LINC00959A0A1B0GUT2 108 aa9.38□□□□□ -0.91
TCOF1-213ENST00000514442 BRI3O95415 125 aa9.38□□□□□ -0.91
TCOF1-213ENST00000514442 NDUFS5O43920 106 aa9.38□□□□□ -0.91
TCOF1-213ENST00000514442 TRBV10-3A0A0K0K1G6 114 aa9.37□□□□□ -0.91
TCOF1-213ENST00000514442 FAM19A3Q7Z5A8 133 aa9.37□□□□□ -0.91
TCOF1-213ENST00000514442 SPTSSBQ8NFR3 76 aa9.37□□□□□ -0.91
TCOF1-213ENST00000514442 WIPF1O43516 503 aa9.37□□□□□ -0.91
TCOF1-213ENST00000514442 C16orf95Q9H693 158 aa9.37□□□□□ -0.91
TCOF1-213ENST00000514442 CHD9Q3L8U1 2897 aa9.37□□□□□ -0.91
TCOF1-213ENST00000514442 IL17DQ8TAD2 202 aa9.36□□□□□ -0.91
TCOF1-213ENST00000514442 HIGD2AQ9BW72 106 aa9.36□□□□□ -0.91
TCOF1-213ENST00000514442 Q8N814 137 aa9.36□□□□□ -0.91
TCOF1-213ENST00000514442 Q8N2B8 174 aa9.36□□□□□ -0.91
TCOF1-213ENST00000514442 LAMA3Q16787 3333 aa9.36□□□□□ -0.91
TCOF1-213ENST00000514442 LELP1Q5T871 98 aa9.36□□□□□ -0.91
TCOF1-213ENST00000514442 BRCA2P51587 3418 aa9.36□□□□□ -0.91
TCOF1-213ENST00000514442 ACANP16112 2415 aa9.35□□□□□ -0.91
TCOF1-213ENST00000514442 CD164L2Q6UWJ8 174 aa9.35□□□□□ -0.91
TCOF1-213ENST00000514442 LITAFQ99732 161 aa9.35□□□□□ -0.91
TCOF1-213ENST00000514442 CDC42SE2Q9NRR3 84 aa9.35□□□□□ -0.91
TCOF1-213ENST00000514442 M0R2N4 97 aa9.35□□□□□ -0.91
TCOF1-213ENST00000514442 DOPEY1Q5JWR5 2465 aa9.34□□□□□ -0.91
TCOF1-213ENST00000514442 ANKRD17O75179 2603 aaKnown RBP9.34□□□□□ -0.91
TCOF1-213ENST00000514442 FAM218AQ96MZ4 157 aa9.34□□□□□ -0.91
TCOF1-213ENST00000514442 SYCNQ0VAF6 134 aa9.34□□□□□ -0.91
TCOF1-213ENST00000514442 NTM-AS1Q6ZSK4 140 aa9.34□□□□□ -0.91
TCOF1-213ENST00000514442 Q6ZSN1 163 aa9.34□□□□□ -0.91
TCOF1-213ENST00000514442 C14orf177Q52M58 125 aa9.33□□□□□ -0.92
TCOF1-213ENST00000514442 BCE1O60756 84 aa9.33□□□□□ -0.92
TCOF1-213ENST00000514442 A0A096LNI7 61 aa9.32□□□□□ -0.92
TCOF1-213ENST00000514442 FHL2Q14192 279 aa9.32□□□□□ -0.92
TCOF1-213ENST00000514442 LINC00337Q8N6G1 96 aa9.32□□□□□ -0.92
TCOF1-213ENST00000514442 PRYO14603 147 aa9.32□□□□□ -0.92
TCOF1-213ENST00000514442 Q8N3U1 123 aa9.32□□□□□ -0.92
TCOF1-213ENST00000514442 Q6ZQY7 126 aa9.31□□□□□ -0.92
TCOF1-213ENST00000514442 IGLV5-39A0A0G2JS06 123 aa9.31□□□□□ -0.92
TCOF1-213ENST00000514442 IGKV2-28A0A075B6P5 120 aa9.31□□□□□ -0.92
TCOF1-213ENST00000514442 IGKV2D-28P01615 120 aa9.31□□□□□ -0.92
TCOF1-213ENST00000514442 IGLV4-60A0A075B6I1 120 aa9.3□□□□□ -0.92
TCOF1-213ENST00000514442 A0A087WZ39 114 aa9.3□□□□□ -0.92
TCOF1-213ENST00000514442 LINC01547P58512 204 aaPredicted RBP9.29□□□□□ -0.92
TCOF1-213ENST00000514442 TMEM254Q8TBM7 123 aa9.29□□□□□ -0.92
TCOF1-213ENST00000514442 Q6ZTC4 211 aa9.29□□□□□ -0.92
TCOF1-213ENST00000514442 LINC01600Q96MT4 127 aa9.29□□□□□ -0.92
TCOF1-213ENST00000514442 COL27A1Q8IZC6 1860 aaPredicted RBP9.28□□□□□ -0.92
TCOF1-213ENST00000514442 PMAIP1Q13794 54 aa9.28□□□□□ -0.92
TCOF1-213ENST00000514442 B9D2Q9BPU9 175 aa9.28□□□□□ -0.92
TCOF1-213ENST00000514442 Q6ZVQ6 151 aa9.27□□□□□ -0.93
TCOF1-213ENST00000514442 ESRGQ1W209 222 aa9.27□□□□□ -0.93
TCOF1-213ENST00000514442 LRCOL1A6NCL2 159 aa9.26□□□□□ -0.93
TCOF1-213ENST00000514442 EIF4EBP3O60516 100 aaPredicted RBP9.26□□□□□ -0.93
TCOF1-213ENST00000514442 IGLV5-45A0A087WSX0 123 aa9.26□□□□□ -0.93
TCOF1-213ENST00000514442 C9orf116Q5BN46 136 aaPredicted RBP9.26□□□□□ -0.93
TCOF1-213ENST00000514442 COX17Q14061 63 aa9.25□□□□□ -0.93
TCOF1-213ENST00000514442 LINC01561Q8N1V8 128 aa9.25□□□□□ -0.93
TCOF1-213ENST00000514442 CYSRT1A8MQ03 144 aa9.25□□□□□ -0.93
TCOF1-213ENST00000514442 CXCL6P80162 114 aa9.25□□□□□ -0.93
TCOF1-213ENST00000514442 BEAN1Q3B7T3 259 aa9.25□□□□□ -0.93
TCOF1-213ENST00000514442 NDUFB1O75438 58 aa9.24□□□□□ -0.93
TCOF1-213ENST00000514442 UNQ6190/PRO20217Q6UXQ8 127 aa9.24□□□□□ -0.93
TCOF1-213ENST00000514442 F8WDY8 70 aa9.24□□□□□ -0.93
TCOF1-213ENST00000514442 Q8IZM0 81 aa9.24□□□□□ -0.93
TCOF1-213ENST00000514442 RPL37AP8A6NKH3 93 aa9.24□□□□□ -0.93
TCOF1-213ENST00000514442 LINC00336Q6ZUF6 198 aa9.24□□□□□ -0.93
TCOF1-213ENST00000514442 C2orf48Q96LS8 159 aa9.24□□□□□ -0.93
TCOF1-213ENST00000514442 FAM30AQ9NZY2 134 aa9.24□□□□□ -0.93
TCOF1-213ENST00000514442 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.23□□□□□ -0.93
TCOF1-213ENST00000514442 C3orf84H3BNL1 204 aa9.23□□□□□ -0.93
TCOF1-213ENST00000514442 LY6G6CO95867 125 aa9.23□□□□□ -0.93
TCOF1-213ENST00000514442 CHKB-CPT1BH3BT56 60 aa9.22□□□□□ -0.93
TCOF1-213ENST00000514442 H0Y9J4 135 aa9.22□□□□□ -0.93
TCOF1-213ENST00000514442 PRR4Q16378 134 aa9.21□□□□□ -0.93
TCOF1-213ENST00000514442 PRR3P79522 188 aaKnown RBP9.21□□□□□ -0.94
TCOF1-213ENST00000514442 PSPHP1O15172 72 aa9.2□□□□□ -0.94
TCOF1-213ENST00000514442 C4orf48Q5BLP8 95 aa9.2□□□□□ -0.94
TCOF1-213ENST00000514442 C11orf72Q8NBR9 251 aa9.2□□□□□ -0.94
TCOF1-213ENST00000514442 M0R378 163 aa9.19□□□□□ -0.94
TCOF1-213ENST00000514442 PLAC8L1A1L4L8 177 aa9.19□□□□□ -0.94
TCOF1-213ENST00000514442 A6NED7 52 aa9.19□□□□□ -0.94
TCOF1-213ENST00000514442 CELA1Q9UNI1 258 aa9.19□□□□□ -0.94
TCOF1-213ENST00000514442 WFDC10BQ8IUB3 73 aa9.18□□□□□ -0.94
TCOF1-213ENST00000514442 LINC00575Q6W349 94 aa9.18□□□□□ -0.94
TCOF1-213ENST00000514442 C6orf223Q8N319 242 aa9.17□□□□□ -0.94
TCOF1-213ENST00000514442 ZNF73O43830 326 aaPredicted RBP9.17□□□□□ -0.94
TCOF1-213ENST00000514442 MUC7Q8TAX7 377 aa9.17□□□□□ -0.94
TCOF1-213ENST00000514442 LYPD5Q6UWN5 251 aa9.15□□□□□ -0.95
TCOF1-213ENST00000514442 TRANK1O15050 2925 aa9.14□□□□□ -0.95
TCOF1-213ENST00000514442 PRUNE2Q8WUY3 3088 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms