RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402		H3BUT2	72 aa		0.87	□□□□□ -2.27
MATR3-223	ENST00000514402	ACYP1	P07311	99 aa		0.87	□□□□□ -2.27
MATR3-223	ENST00000514402	GNGT1	P63211	74 aa		0.87	□□□□□ -2.27
MATR3-223	ENST00000514402	PLGLA	Q15195	96 aa		0.87	□□□□□ -2.27
MATR3-223	ENST00000514402	BVES-AS1	Q5T3Y7	98 aa		0.87	□□□□□ -2.27
MATR3-223	ENST00000514402	SSBP3-AS1	Q7Z2R9	100 aa		0.87	□□□□□ -2.27
MATR3-223	ENST00000514402	UBE2D4	Q9Y2X8	147 aa		0.87	□□□□□ -2.27
MATR3-223	ENST00000514402	PAPPA2	Q9BXP8	1791 aa		0.87	□□□□□ -2.27
MATR3-223	ENST00000514402	JMJD1C	Q15652	2540 aa		0.87	□□□□□ -2.27
MATR3-223	ENST00000514402	ERCC6L2	Q5T890	1561 aa		0.87	□□□□□ -2.27
MATR3-223	ENST00000514402	CRYBG1	Q9Y4K1	1723 aa		0.86	□□□□□ -2.27
MATR3-223	ENST00000514402	KCP	Q6ZWJ8	1503 aa		0.86	□□□□□ -2.27
MATR3-223	ENST00000514402	SPATA8	Q6RVD6	105 aa		0.86	□□□□□ -2.27
MATR3-223	ENST00000514402	C6orf201	Q7Z4U5	140 aa		0.86	□□□□□ -2.27
MATR3-223	ENST00000514402	CFAP74	Q9C0B2	1584 aa		0.86	□□□□□ -2.27
MATR3-223	ENST00000514402	LAMC1	P11047	1609 aa		0.86	□□□□□ -2.27
MATR3-223	ENST00000514402	ALK	Q9UM73	1620 aa		0.86	□□□□□ -2.27
MATR3-223	ENST00000514402	DNAJC13	O75165	2243 aa		0.85	□□□□□ -2.27
MATR3-223	ENST00000514402	ASXL3	Q9C0F0	2248 aa		0.85	□□□□□ -2.27
MATR3-223	ENST00000514402	IGLC2	P0DOY2	106 aa		0.85	□□□□□ -2.27
MATR3-223	ENST00000514402	IGLC3	P0DOY3	106 aa		0.85	□□□□□ -2.27
MATR3-223	ENST00000514402	DNMBP	Q6XZF7	1577 aa		0.85	□□□□□ -2.27
MATR3-223	ENST00000514402	C10orf95	Q9H7T3	257 aa		0.85	□□□□□ -2.27
MATR3-223	ENST00000514402	CACNA1C	Q13936	2221 aa		0.85	□□□□□ -2.27
MATR3-223	ENST00000514402	CCDC88B	A6NC98	1476 aa		0.85	□□□□□ -2.27
MATR3-223	ENST00000514402	PLXNB2	O15031	1838 aa		0.85	□□□□□ -2.27
MATR3-223	ENST00000514402	ABCA8	O94911	1581 aa		0.84	□□□□□ -2.27
MATR3-223	ENST00000514402	CEBPZOS	A8MTT3	80 aa		0.84	□□□□□ -2.27
MATR3-223	ENST00000514402	NAV3	Q8IVL0	2385 aa		0.84	□□□□□ -2.28
MATR3-223	ENST00000514402	PPRC1	Q5VV67	1664 aa	Known RBP	0.84	□□□□□ -2.28
MATR3-223	ENST00000514402	ABCC1	P33527	1531 aa		0.84	□□□□□ -2.28
MATR3-223	ENST00000514402	SAMD9	Q5K651	1589 aa		0.83	□□□□□ -2.28
MATR3-223	ENST00000514402	ANKAR	Q7Z5J8	1434 aa		0.83	□□□□□ -2.28
MATR3-223	ENST00000514402		A0A1B0GU69	56 aa		0.83	□□□□□ -2.28
MATR3-223	ENST00000514402	FAM103A1	Q9BTL3	118 aa	Known RBP	0.83	□□□□□ -2.28
MATR3-223	ENST00000514402	ATP7B	P35670	1465 aa		0.83	□□□□□ -2.28
MATR3-223	ENST00000514402	LRRC9	Q6ZRR7	1453 aa		0.83	□□□□□ -2.28
MATR3-223	ENST00000514402	LINC00959	A0A1B0GUT2	108 aa		0.82	□□□□□ -2.28
MATR3-223	ENST00000514402	S100A3	P33764	101 aa		0.82	□□□□□ -2.28
MATR3-223	ENST00000514402	LTN1	O94822	1766 aa		0.82	□□□□□ -2.28
MATR3-223	ENST00000514402	IQGAP3	Q86VI3	1631 aa		0.82	□□□□□ -2.28
MATR3-223	ENST00000514402	PTPN23	Q9H3S7	1636 aa		0.82	□□□□□ -2.28
MATR3-223	ENST00000514402		A0A0G2JMZ2	1700 aa		0.81	□□□□□ -2.28
MATR3-223	ENST00000514402	PKD1L3	Q7Z443	1732 aa		0.81	□□□□□ -2.28
MATR3-223	ENST00000514402	TULP4	Q9NRJ4	1543 aa		0.81	□□□□□ -2.28
MATR3-223	ENST00000514402		A0A1B0GUT8	65 aa		0.81	□□□□□ -2.28
MATR3-223	ENST00000514402	CFD	P00746	253 aa	Predicted RBP	0.81	□□□□□ -2.28
MATR3-223	ENST00000514402	C18orf32	Q8TCD1	76 aa		0.81	□□□□□ -2.28
MATR3-223	ENST00000514402	SMCO4	Q9NRQ5	59 aa		0.81	□□□□□ -2.28
MATR3-223	ENST00000514402	MYO5C	Q9NQX4	1742 aa		0.81	□□□□□ -2.28
MATR3-223	ENST00000514402	NCOA2	Q15596	1464 aa		0.8	□□□□□ -2.28
MATR3-223	ENST00000514402	KIF20B	Q96Q89	1820 aa		0.8	□□□□□ -2.28
MATR3-223	ENST00000514402	SLIT1	O75093	1534 aa		0.8	□□□□□ -2.28
MATR3-223	ENST00000514402	KIAA0556	O60303	1618 aa		0.8	□□□□□ -2.28
MATR3-223	ENST00000514402	TRBV7-4	A0A0J9YYF1	115 aa		0.8	□□□□□ -2.28
MATR3-223	ENST00000514402	DEFA5	Q01523	94 aa		0.8	□□□□□ -2.28
MATR3-223	ENST00000514402	LRRC7	Q96NW7	1537 aa		0.79	□□□□□ -2.28
MATR3-223	ENST00000514402	UGGT2	Q9NYU1	1516 aa		0.79	□□□□□ -2.28
MATR3-223	ENST00000514402	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	0.79	□□□□□ -2.28
MATR3-223	ENST00000514402	PIK3C2B	O00750	1634 aa		0.79	□□□□□ -2.28
MATR3-223	ENST00000514402	PAPPA	Q13219	1627 aa		0.79	□□□□□ -2.28
MATR3-223	ENST00000514402	RGPD1	P0DJD0	1748 aa		0.79	□□□□□ -2.28
MATR3-223	ENST00000514402		I3L2K1	104 aa		0.79	□□□□□ -2.28
MATR3-223	ENST00000514402	DEFB112	Q30KQ8	113 aa		0.79	□□□□□ -2.28
MATR3-223	ENST00000514402	DEFB121	Q5J5C9	76 aa		0.79	□□□□□ -2.28
MATR3-223	ENST00000514402	TP53AIP1	Q9HCN2	124 aa		0.79	□□□□□ -2.28
MATR3-223	ENST00000514402	ZNF462	Q96JM2	2506 aa		0.79	□□□□□ -2.28
MATR3-223	ENST00000514402	CCDC141	Q6ZP82	1450 aa		0.79	□□□□□ -2.28
MATR3-223	ENST00000514402	ADAMTS12	P58397	1594 aa		0.79	□□□□□ -2.28
MATR3-223	ENST00000514402	ZNF831	Q5JPB2	1677 aa		0.78	□□□□□ -2.28
MATR3-223	ENST00000514402	RGPD8	O14715	1765 aa	Predicted RBP	0.78	□□□□□ -2.28
MATR3-223	ENST00000514402	RGPD5	Q99666	1765 aa		0.78	□□□□□ -2.28
MATR3-223	ENST00000514402	ANKRD36	A6QL64	1941 aa		0.78	□□□□□ -2.28
MATR3-223	ENST00000514402		A0A0D9SFI3	127 aa		0.78	□□□□□ -2.28
MATR3-223	ENST00000514402	COX6A2	Q02221	97 aa		0.78	□□□□□ -2.28
MATR3-223	ENST00000514402	CNFN	Q9BYD5	112 aa		0.78	□□□□□ -2.28
MATR3-223	ENST00000514402	PRO0255	Q9UI72	69 aa		0.78	□□□□□ -2.28
MATR3-223	ENST00000514402	CLIP1	P30622	1438 aa		0.78	□□□□□ -2.28
MATR3-223	ENST00000514402	FAM208B	Q5VWN6	2430 aa		0.78	□□□□□ -2.28
MATR3-223	ENST00000514402	NKTR	P30414	1462 aa	Known RBP	0.78	□□□□□ -2.28
MATR3-223	ENST00000514402	URB2	Q14146	1524 aa	Known RBP	0.78	□□□□□ -2.28
MATR3-223	ENST00000514402	RGPD2	P0DJD1	1756 aa		0.78	□□□□□ -2.29
MATR3-223	ENST00000514402	PDCD5	O14737	125 aa		0.77	□□□□□ -2.29
MATR3-223	ENST00000514402	SMIM13	P0DJ93	91 aa		0.77	□□□□□ -2.29
MATR3-223	ENST00000514402	ATP5EP2	Q5VTU8	51 aa		0.77	□□□□□ -2.29
MATR3-223	ENST00000514402	USP32	Q8NFA0	1604 aa		0.77	□□□□□ -2.29
MATR3-223	ENST00000514402	ZC3H13	Q5T200	1668 aa	Known RBP	0.76	□□□□□ -2.29
MATR3-223	ENST00000514402	SETBP1	Q9Y6X0	1596 aa		0.76	□□□□□ -2.29
MATR3-223	ENST00000514402	TRAV21	A0A0B4J279	112 aa		0.76	□□□□□ -2.29
MATR3-223	ENST00000514402	PIGY	Q3MUY2	71 aa		0.76	□□□□□ -2.29
MATR3-223	ENST00000514402	LRRC37A	A6NMS7	1700 aa		0.75	□□□□□ -2.29
MATR3-223	ENST00000514402	TENM3	Q9P273	2699 aa		0.75	□□□□□ -2.29
MATR3-223	ENST00000514402	AHCTF1	Q8WYP5	2266 aa		0.75	□□□□□ -2.29
MATR3-223	ENST00000514402		A0A087WXM4	84 aa		0.75	□□□□□ -2.29
MATR3-223	ENST00000514402	FXYD6-FXYD2	A0A087WZ82	144 aa		0.75	□□□□□ -2.29
MATR3-223	ENST00000514402	PRB3	Q04118	309 aa	Predicted RBP	0.75	□□□□□ -2.29
MATR3-223	ENST00000514402	WFDC9	Q8NEX5	89 aa		0.75	□□□□□ -2.29
MATR3-223	ENST00000514402	GAFA1	Q96PS6	74 aa		0.75	□□□□□ -2.29
MATR3-223	ENST00000514402	MAGI3	Q5TCQ9	1506 aa		0.74	□□□□□ -2.29
MATR3-223	ENST00000514402	ANKRD17	O75179	2603 aa	Known RBP	0.74	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms