RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 CXCL5P42830 114 aa5.68□□□□□ -1.5
RNF4-220ENST00000513578 XCL1P47992 114 aa5.68□□□□□ -1.5
RNF4-220ENST00000513578 FOXI1Q12951 378 aa5.68□□□□□ -1.5
RNF4-220ENST00000513578 LINC01556Q5JQF7 62 aa5.68□□□□□ -1.5
RNF4-220ENST00000513578 ENHOQ6UWT2 76 aa5.68□□□□□ -1.5
RNF4-220ENST00000513578 GTF2H5Q6ZYL4 71 aa5.68□□□□□ -1.5
RNF4-220ENST00000513578 C5orf38Q86SI9 138 aa5.68□□□□□ -1.5
RNF4-220ENST00000513578 PRO1854Q9UHT4 67 aa5.68□□□□□ -1.5
RNF4-220ENST00000513578 RYR1P21817 5038 aa5.68□□□□□ -1.5
RNF4-220ENST00000513578 DNAH9Q9NYC9 4486 aa5.67□□□□□ -1.5
RNF4-220ENST00000513578 EPPK1P58107 5090 aaKnown RBP5.67□□□□□ -1.5
RNF4-220ENST00000513578 KIAA0087Q14695 138 aa5.67□□□□□ -1.5
RNF4-220ENST00000513578 Q8N3U1 123 aa5.67□□□□□ -1.5
RNF4-220ENST00000513578 MRAPQ8TCY5 172 aa5.67□□□□□ -1.5
RNF4-220ENST00000513578 LINC00308Q8TCZ7 52 aa5.67□□□□□ -1.5
RNF4-220ENST00000513578 KLK5Q9Y337 293 aaPredicted RBP5.67□□□□□ -1.5
RNF4-220ENST00000513578 GAGE10A6NGK3 116 aa5.66□□□□□ -1.5
RNF4-220ENST00000513578 EIF4EBP3O60516 100 aaPredicted RBP5.66□□□□□ -1.5
RNF4-220ENST00000513578 APOMO95445 188 aa5.66□□□□□ -1.5
RNF4-220ENST00000513578 IGHV3-33P01772 117 aa5.66□□□□□ -1.5
RNF4-220ENST00000513578 PRSS2P07478 247 aa5.66□□□□□ -1.5
RNF4-220ENST00000513578 NHLRC4P0CG21 123 aaPredicted RBP5.66□□□□□ -1.5
RNF4-220ENST00000513578 DNAH10OSP0CZ25 163 aa5.66□□□□□ -1.5
RNF4-220ENST00000513578 MEIG1Q5JSS6 88 aa5.66□□□□□ -1.5
RNF4-220ENST00000513578 WFDC10BQ8IUB3 73 aa5.66□□□□□ -1.5
RNF4-220ENST00000513578 MUC7Q8TAX7 377 aa5.66□□□□□ -1.5
RNF4-220ENST00000513578 KLK12Q9UKR0 248 aa5.66□□□□□ -1.5
RNF4-220ENST00000513578 LOC107984156A0A0G2JMH3 177 aa5.65□□□□□ -1.5
RNF4-220ENST00000513578 GAGE12HA6NDE8 117 aa5.65□□□□□ -1.5
RNF4-220ENST00000513578 TSPAN13O95857 204 aa5.65□□□□□ -1.5
RNF4-220ENST00000513578 CRPP02741 224 aa5.65□□□□□ -1.5
RNF4-220ENST00000513578 LORP23490 312 aaPredicted RBP5.65□□□□□ -1.5
RNF4-220ENST00000513578 C6orf226Q5I0X4 101 aa5.65□□□□□ -1.5
RNF4-220ENST00000513578 LYRM7Q5U5X0 104 aa5.65□□□□□ -1.5
RNF4-220ENST00000513578 KRTAP26-1Q6PEX3 210 aa5.65□□□□□ -1.5
RNF4-220ENST00000513578 CLPSL2Q6UWE3 100 aa5.65□□□□□ -1.5
RNF4-220ENST00000513578 ARL17AQ8IVW1 177 aa5.65□□□□□ -1.5
RNF4-220ENST00000513578 UPK3BQ9BT76 320 aa5.65□□□□□ -1.5
RNF4-220ENST00000513578 TOMM7Q9P0U1 55 aa5.65□□□□□ -1.5
RNF4-220ENST00000513578 SPCS1Q9Y6A9 102 aa5.65□□□□□ -1.5
RNF4-220ENST00000513578 MALP21145 153 aa5.64□□□□□ -1.51
RNF4-220ENST00000513578 COX17Q14061 63 aa5.64□□□□□ -1.51
RNF4-220ENST00000513578 ERG28Q9UKR5 140 aa5.64□□□□□ -1.51
RNF4-220ENST00000513578 IGLV10-54A0A075B6I4 117 aa5.63□□□□□ -1.51
RNF4-220ENST00000513578 GVQW2A0A096LPI5 108 aaPredicted RBP5.63□□□□□ -1.51
RNF4-220ENST00000513578 TRBV30A0A0K0K1B3 111 aa5.63□□□□□ -1.51
RNF4-220ENST00000513578 F8WDY8 70 aa5.63□□□□□ -1.51
RNF4-220ENST00000513578 CCL18P55774 89 aa5.63□□□□□ -1.51
RNF4-220ENST00000513578 CFAP161Q6P656 301 aa5.63□□□□□ -1.51
RNF4-220ENST00000513578 SOSTDC1Q6X4U4 206 aa5.63□□□□□ -1.51
RNF4-220ENST00000513578 UBE2WQ96B02 151 aa5.63□□□□□ -1.51
RNF4-220ENST00000513578 NAA38Q9BRA0 125 aaKnown RBP5.63□□□□□ -1.51
RNF4-220ENST00000513578 TRBV20-1A0A075B6N2 111 aa5.62□□□□□ -1.51
RNF4-220ENST00000513578 CKS1BP61024 79 aa5.62□□□□□ -1.51
RNF4-220ENST00000513578 MIR7-3HGQ8N6C7 128 aa5.62□□□□□ -1.51
RNF4-220ENST00000513578 DAND5Q8N907 189 aa5.62□□□□□ -1.51
RNF4-220ENST00000513578 LINC00588Q9Y4M8 146 aa5.62□□□□□ -1.51
RNF4-220ENST00000513578 DYNC2H1Q8NCM8 4307 aaKnown RBP5.61□□□□□ -1.51
RNF4-220ENST00000513578 LINC00158P58513 81 aa5.61□□□□□ -1.51
RNF4-220ENST00000513578 NTN5Q8WTR8 489 aaPredicted RBP5.61□□□□□ -1.51
RNF4-220ENST00000513578 NPC2P61916 151 aa5.6□□□□□ -1.51
RNF4-220ENST00000513578 SPAG11BQ08648 103 aa5.6□□□□□ -1.51
RNF4-220ENST00000513578 C2orf48Q96LS8 159 aa5.6□□□□□ -1.51
RNF4-220ENST00000513578 C1orf43Q9BWL3 253 aa5.6□□□□□ -1.51
RNF4-220ENST00000513578 TRAV13-2A0A0B4J235 113 aa5.59□□□□□ -1.51
RNF4-220ENST00000513578 A0A0U1RRA0 63 aa5.59□□□□□ -1.51
RNF4-220ENST00000513578 F8W1H4 67 aa5.59□□□□□ -1.51
RNF4-220ENST00000513578 NDUFC2O95298 119 aa5.59□□□□□ -1.51
RNF4-220ENST00000513578 C2orf82Q6UX34 121 aa5.59□□□□□ -1.51
RNF4-220ENST00000513578 APLNQ9ULZ1 77 aa5.59□□□□□ -1.51
RNF4-220ENST00000513578 HYDINQ4G0P3 5121 aa5.58□□□□□ -1.52
RNF4-220ENST00000513578 COX6CP09669 75 aa5.58□□□□□ -1.52
RNF4-220ENST00000513578 RPL13AP40429 203 aaKnown RBP5.58□□□□□ -1.52
RNF4-220ENST00000513578 RMI2Q96E14 147 aa5.58□□□□□ -1.52
RNF4-220ENST00000513578 LINC01600Q96MT4 127 aa5.58□□□□□ -1.52
RNF4-220ENST00000513578 SND1-IT1Q9HBX3 110 aa5.58□□□□□ -1.52
RNF4-220ENST00000513578 M0QXV9 152 aa5.57□□□□□ -1.52
RNF4-220ENST00000513578 TCL1BO95988 128 aa5.57□□□□□ -1.52
RNF4-220ENST00000513578 PFN2P35080 140 aa5.57□□□□□ -1.52
RNF4-220ENST00000513578 PSMB2P49721 201 aa5.57□□□□□ -1.52
RNF4-220ENST00000513578 Q1RN00 199 aa5.57□□□□□ -1.52
RNF4-220ENST00000513578 C15orf56Q8N910 161 aa5.57□□□□□ -1.52
RNF4-220ENST00000513578 PRO0461Q9UI25 63 aa5.57□□□□□ -1.52
RNF4-220ENST00000513578 PRKDCP78527 4128 aaKnown RBP5.57□□□□□ -1.52
RNF4-220ENST00000513578 IGKV2-28A0A075B6P5 120 aa5.56□□□□□ -1.52
RNF4-220ENST00000513578 NUPR2A6NF83 97 aa5.56□□□□□ -1.52
RNF4-220ENST00000513578 H3BMG7 143 aa5.56□□□□□ -1.52
RNF4-220ENST00000513578 ZNF561-AS1K7EIQ3 104 aa5.56□□□□□ -1.52
RNF4-220ENST00000513578 TRIAP1O43715 76 aa5.56□□□□□ -1.52
RNF4-220ENST00000513578 IGKV2D-28P01615 120 aa5.56□□□□□ -1.52
RNF4-220ENST00000513578 SCGB1C2P0DMR2 95 aa5.56□□□□□ -1.52
RNF4-220ENST00000513578 RPL28P46779 137 aaKnown RBP5.56□□□□□ -1.52
RNF4-220ENST00000513578 UNQ6190/PRO20217Q6UXQ8 127 aa5.56□□□□□ -1.52
RNF4-220ENST00000513578 DNAH1Q9P2D7 4330 aa5.55□□□□□ -1.52
RNF4-220ENST00000513578 IGKV2D-24A0A075B6R9 120 aa5.55□□□□□ -1.52
RNF4-220ENST00000513578 ATXN8Q156A1 80 aa5.55□□□□□ -1.52
RNF4-220ENST00000513578 RNF151Q2KHN1 245 aa5.55□□□□□ -1.52
RNF4-220ENST00000513578 C10orf25Q5T742 122 aa5.55□□□□□ -1.52
RNF4-220ENST00000513578 C6orf223Q8N319 242 aa5.55□□□□□ -1.52
RNF4-220ENST00000513578 LINC00337Q8N6G1 96 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms