RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 KIAA0087Q14695 138 aa2.61□□□□□ -1.99
HTT-211ENST00000513326 Q5BKY6 102 aa2.61□□□□□ -1.99
HTT-211ENST00000513326 IMMP2LQ96T52 175 aa2.61□□□□□ -1.99
HTT-211ENST00000513326 MAP1LC3BQ9GZQ8 125 aa2.61□□□□□ -1.99
HTT-211ENST00000513326 XAGE1AQ9HD64 81 aa2.61□□□□□ -1.99
HTT-211ENST00000513326 C1orf196B1AJZ1 125 aa2.6□□□□□ -1.99
HTT-211ENST00000513326 I3L3M4 83 aa2.6□□□□□ -1.99
HTT-211ENST00000513326 NUPR1O60356 82 aa2.6□□□□□ -1.99
HTT-211ENST00000513326 SCO1O75880 301 aa2.6□□□□□ -1.99
HTT-211ENST00000513326 MBP02144 154 aa2.6□□□□□ -1.99
HTT-211ENST00000513326 TRGC1P0CF51 173 aa2.6□□□□□ -1.99
HTT-211ENST00000513326 PMCHP20382 165 aa2.6□□□□□ -1.99
HTT-211ENST00000513326 RPL35P42766 123 aaKnown RBP2.6□□□□□ -1.99
HTT-211ENST00000513326 RPL28P46779 137 aaKnown RBP2.6□□□□□ -1.99
HTT-211ENST00000513326 SERF2P84101 59 aa2.6□□□□□ -1.99
HTT-211ENST00000513326 FAM229BQ4G0N7 80 aa2.6□□□□□ -1.99
HTT-211ENST00000513326 PCOTHQ58A44 107 aa2.6□□□□□ -1.99
HTT-211ENST00000513326 FP248Q71RG6 208 aaPredicted RBP2.6□□□□□ -1.99
HTT-211ENST00000513326 OR10D4PQ8NGN7 298 aa2.6□□□□□ -1.99
HTT-211ENST00000513326 MRAP2Q96G30 205 aa2.6□□□□□ -1.99
HTT-211ENST00000513326 HIST1H4GQ99525 98 aa2.6□□□□□ -1.99
HTT-211ENST00000513326 UBE2D4Q9Y2X8 147 aa2.6□□□□□ -1.99
HTT-211ENST00000513326 IGKV2D-26A0A0A0MRZ7 120 aa2.59□□□□□ -1.99
HTT-211ENST00000513326 IGHV3OR16-9A0A0B4J2B5 98 aa2.59□□□□□ -1.99
HTT-211ENST00000513326 A0A0J9YXY3 114 aa2.59□□□□□ -1.99
HTT-211ENST00000513326 C7orf77A4D0Y5 90 aa2.59□□□□□ -1.99
HTT-211ENST00000513326 RAB19A4D1S5 217 aa2.59□□□□□ -1.99
HTT-211ENST00000513326 NDUFC2-KCTD14E9PQ53 114 aa2.59□□□□□ -1.99
HTT-211ENST00000513326 ATP5LO75964 103 aa2.59□□□□□ -1.99
HTT-211ENST00000513326 PET100P0DJ07 73 aa2.59□□□□□ -1.99
HTT-211ENST00000513326 PRLHP81277 87 aa2.59□□□□□ -1.99
HTT-211ENST00000513326 CENPWQ5EE01 88 aa2.59□□□□□ -1.99
HTT-211ENST00000513326 DAND5Q8N907 189 aa2.59□□□□□ -1.99
HTT-211ENST00000513326 NKX6-2Q9C056 277 aaPredicted RBP2.59□□□□□ -1.99
HTT-211ENST00000513326 TRBV6-5A0A0K0K1A5 114 aa2.58□□□□□ -2
HTT-211ENST00000513326 SMKR1H3BMG3 65 aa2.58□□□□□ -2
HTT-211ENST00000513326 SSNA1O43805 119 aa2.58□□□□□ -2
HTT-211ENST00000513326 IFNA1P01562 189 aa2.58□□□□□ -2
HTT-211ENST00000513326 POLR2KP53803 58 aaKnown RBP2.58□□□□□ -2
HTT-211ENST00000513326 IFITM3Q01628 133 aa2.58□□□□□ -2
HTT-211ENST00000513326 MRPL55Q7Z7F7 128 aaKnown RBP2.58□□□□□ -2
HTT-211ENST00000513326 C9orf62Q8N4C0 152 aa2.58□□□□□ -2
HTT-211ENST00000513326 LINC00167Q96N53 147 aa2.58□□□□□ -2
HTT-211ENST00000513326 TCEAL7Q9BRU2 100 aa2.58□□□□□ -2
HTT-211ENST00000513326 MARVELD1Q9BSK0 173 aa2.58□□□□□ -2
HTT-211ENST00000513326 CNFNQ9BYD5 112 aa2.58□□□□□ -2
HTT-211ENST00000513326 MACF1Q9UPN3 7388 aaKnown RBP2.58□□□□□ -2
HTT-211ENST00000513326 TRBV20OR9-2A0A075B6H5 130 aa2.57□□□□□ -2
HTT-211ENST00000513326 F2Z2F3 143 aa2.57□□□□□ -2
HTT-211ENST00000513326 RPS20P60866 119 aaKnown RBP2.57□□□□□ -2
HTT-211ENST00000513326 RPL39P62891 51 aaKnown RBP2.57□□□□□ -2
HTT-211ENST00000513326 TMEM241Q24JQ0 296 aa2.57□□□□□ -2
HTT-211ENST00000513326 AKR1C8PQ5T2L2 129 aa2.57□□□□□ -2
HTT-211ENST00000513326 NKAPP1Q8N9T2 125 aa2.57□□□□□ -2
HTT-211ENST00000513326 ENKURQ8TC29 256 aa2.57□□□□□ -2
HTT-211ENST00000513326 PACRGQ96M98 296 aaPredicted RBP2.57□□□□□ -2
HTT-211ENST00000513326 ST20Q9HBF5 79 aa2.57□□□□□ -2
HTT-211ENST00000513326 TRBV30A0A0K0K1B3 111 aa2.56□□□□□ -2
HTT-211ENST00000513326 TRBV27A0A0K0K1C4 114 aa2.56□□□□□ -2
HTT-211ENST00000513326 ZNF727A8MUV8 499 aa2.56□□□□□ -2
HTT-211ENST00000513326 TMEM238C9JI98 176 aa2.56□□□□□ -2
HTT-211ENST00000513326 UPK1BO75841 260 aa2.56□□□□□ -2
HTT-211ENST00000513326 S100A9P06702 114 aaKnown RBP2.56□□□□□ -2
HTT-211ENST00000513326 UBE2AP49459 152 aa2.56□□□□□ -2
HTT-211ENST00000513326 CCL20P78556 96 aa2.56□□□□□ -2
HTT-211ENST00000513326 SFT2D1Q8WV19 159 aa2.56□□□□□ -2
HTT-211ENST00000513326 CCDC32Q9BV29 185 aa2.56□□□□□ -2
HTT-211ENST00000513326 CYTL1Q9NRR1 136 aa2.56□□□□□ -2
HTT-211ENST00000513326 CSDC2Q9Y534 153 aaKnown RBP2.56□□□□□ -2
HTT-211ENST00000513326 K7EN84 100 aa2.55□□□□□ -2
HTT-211ENST00000513326 SEC61GP60059 68 aa2.55□□□□□ -2
HTT-211ENST00000513326 Q6ZN92 141 aa2.55□□□□□ -2
HTT-211ENST00000513326 FAM213BQ8TBF2 198 aa2.55□□□□□ -2
HTT-211ENST00000513326 PLEKHB2Q96CS7 222 aa2.55□□□□□ -2
HTT-211ENST00000513326 TP73-AS1Q9UF72 201 aa2.55□□□□□ -2
HTT-211ENST00000513326 NEBP20929 6669 aa2.55□□□□□ -2
HTT-211ENST00000513326 IGKV2-28A0A075B6P5 120 aa2.54□□□□□ -2
HTT-211ENST00000513326 PFDN1O60925 122 aa2.54□□□□□ -2
HTT-211ENST00000513326 IGKV2D-28P01615 120 aa2.54□□□□□ -2
HTT-211ENST00000513326 FCER1GP30273 86 aa2.54□□□□□ -2
HTT-211ENST00000513326 CTAG1AP78358 180 aa2.54□□□□□ -2
HTT-211ENST00000513326 AMN1Q8IY45 258 aa2.54□□□□□ -2
HTT-211ENST00000513326 KCNRGQ8N5I3 272 aa2.54□□□□□ -2
HTT-211ENST00000513326 FXYD6-FXYD2A0A087WZ82 144 aa2.53□□□□□ -2
HTT-211ENST00000513326 BORCS7-ASMTA0A0B4J1R7 106 aa2.53□□□□□ -2
HTT-211ENST00000513326 XKRY2A2RUG3 117 aa2.53□□□□□ -2
HTT-211ENST00000513326 H0Y8G0 127 aa2.53□□□□□ -2
HTT-211ENST00000513326 RAB4AP20338 218 aa2.53□□□□□ -2
HTT-211ENST00000513326 GNG4P50150 75 aa2.53□□□□□ -2
HTT-211ENST00000513326 C6orf226Q5I0X4 101 aa2.53□□□□□ -2
HTT-211ENST00000513326 SPAG11AQ6PDA7 123 aa2.53□□□□□ -2
HTT-211ENST00000513326 COX6B2Q6YFQ2 88 aa2.53□□□□□ -2
HTT-211ENST00000513326 Q8NDZ9 215 aa2.53□□□□□ -2
HTT-211ENST00000513326 MBD3L1Q8WWY6 194 aa2.53□□□□□ -2
HTT-211ENST00000513326 SPRR4Q96PI1 79 aa2.53□□□□□ -2
HTT-211ENST00000513326 TIMM21Q9BVV7 248 aa2.53□□□□□ -2
HTT-211ENST00000513326 TOMM7Q9P0U1 55 aa2.53□□□□□ -2
HTT-211ENST00000513326 GNG13Q9P2W3 67 aa2.53□□□□□ -2
HTT-211ENST00000513326 TGIF2-C20orf24A0A0A6YYL0 155 aa2.52□□□□□ -2.01
HTT-211ENST00000513326 C9orf92A6NGG3 77 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms