RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 TSPEAR-AS2P59090 65 aa11.38□□□□□ -0.59
HMGCL-209ENST00000513148 ESRGQ1W209 222 aa11.38□□□□□ -0.59
HMGCL-209ENST00000513148 C2orf82Q6UX34 121 aa11.38□□□□□ -0.59
HMGCL-209ENST00000513148 COX6CP09669 75 aa11.37□□□□□ -0.59
HMGCL-209ENST00000513148 LINC00588Q9Y4M8 146 aa11.37□□□□□ -0.59
HMGCL-209ENST00000513148 HYDINQ4G0P3 5121 aa11.37□□□□□ -0.59
HMGCL-209ENST00000513148 SACSQ9NZJ4 4579 aa11.37□□□□□ -0.59
HMGCL-209ENST00000513148 POLR2KP53803 58 aaKnown RBP11.36□□□□□ -0.59
HMGCL-209ENST00000513148 VCYO14598 125 aa11.36□□□□□ -0.59
HMGCL-209ENST00000513148 LINC00315P59091 139 aa11.36□□□□□ -0.59
HMGCL-209ENST00000513148 RPS28P62857 69 aaKnown RBP11.36□□□□□ -0.59
HMGCL-209ENST00000513148 RPL39LQ96EH5 51 aaKnown RBP11.36□□□□□ -0.59
HMGCL-209ENST00000513148 TMEM223A0PJW6 202 aa11.35□□□□□ -0.59
HMGCL-209ENST00000513148 MUSTN1Q8IVN3 82 aa11.35□□□□□ -0.59
HMGCL-209ENST00000513148 H7C423 109 aa11.35□□□□□ -0.59
HMGCL-209ENST00000513148 UQCRQO14949 82 aa11.35□□□□□ -0.59
HMGCL-209ENST00000513148 C3orf22Q8N5N4 141 aa11.35□□□□□ -0.59
HMGCL-209ENST00000513148 PPDPFQ9H3Y8 114 aa11.35□□□□□ -0.59
HMGCL-209ENST00000513148 ZNRF2Q8NHG8 242 aa11.34□□□□□ -0.59
HMGCL-209ENST00000513148 DNAH1Q9P2D7 4330 aa11.34□□□□□ -0.59
HMGCL-209ENST00000513148 TRIAP1O43715 76 aa11.33□□□□□ -0.6
HMGCL-209ENST00000513148 SUMO4Q6EEV6 95 aa11.33□□□□□ -0.6
HMGCL-209ENST00000513148 LYPD5Q6UWN5 251 aa11.33□□□□□ -0.6
HMGCL-209ENST00000513148 TRBV6-5A0A0K0K1A5 114 aa11.33□□□□□ -0.6
HMGCL-209ENST00000513148 Q1RN00 199 aa11.33□□□□□ -0.6
HMGCL-209ENST00000513148 LINC00526Q96FQ7 95 aa11.33□□□□□ -0.6
HMGCL-209ENST00000513148 CHCHD5Q9BSY4 110 aa11.33□□□□□ -0.6
HMGCL-209ENST00000513148 CSDC2Q9Y534 153 aaKnown RBP11.33□□□□□ -0.6
HMGCL-209ENST00000513148 VPS13DQ5THJ4 4388 aa11.32□□□□□ -0.6
HMGCL-209ENST00000513148 RYR2Q92736 4967 aa11.32□□□□□ -0.6
HMGCL-209ENST00000513148 KMT2AQ03164 3969 aa11.32□□□□□ -0.6
HMGCL-209ENST00000513148 RYR3Q15413 4870 aa11.31□□□□□ -0.6
HMGCL-209ENST00000513148 TRBV10-1A0A0K0K1A3 114 aa11.31□□□□□ -0.6
HMGCL-209ENST00000513148 RPL36AP83881 106 aaKnown RBP11.31□□□□□ -0.6
HMGCL-209ENST00000513148 RPL36ALQ969Q0 106 aaKnown RBP11.31□□□□□ -0.6
HMGCL-209ENST00000513148 TRBV27A0A0K0K1C4 114 aa11.31□□□□□ -0.6
HMGCL-209ENST00000513148 LST1O00453 97 aa11.31□□□□□ -0.6
HMGCL-209ENST00000513148 LINC00694P0DN24 101 aa11.31□□□□□ -0.6
HMGCL-209ENST00000513148 CXCL5P42830 114 aa11.31□□□□□ -0.6
HMGCL-209ENST00000513148 SDIM1Q6ZPB5 146 aa11.31□□□□□ -0.6
HMGCL-209ENST00000513148 M0QY20 66 aa11.3□□□□□ -0.6
HMGCL-209ENST00000513148 LINC00643Q86TS7 51 aa11.3□□□□□ -0.6
HMGCL-209ENST00000513148 J3KT08 172 aa11.29□□□□□ -0.6
HMGCL-209ENST00000513148 M0R2N4 97 aa11.29□□□□□ -0.6
HMGCL-209ENST00000513148 IGHV3-38A0A0C4DH36 116 aa11.28□□□□□ -0.6
HMGCL-209ENST00000513148 Q9H8V8 135 aa11.28□□□□□ -0.6
HMGCL-209ENST00000513148 A0A0J9YXY3 114 aa11.28□□□□□ -0.6
HMGCL-209ENST00000513148 C9orf153Q5TBE3 101 aa11.28□□□□□ -0.6
HMGCL-209ENST00000513148 UPK3BQ9BT76 320 aa11.28□□□□□ -0.6
HMGCL-209ENST00000513148 WFDC10BQ8IUB3 73 aa11.27□□□□□ -0.61
HMGCL-209ENST00000513148 ZNF22P17026 224 aaPredicted RBP11.26□□□□□ -0.61
HMGCL-209ENST00000513148 LITAFQ99732 161 aa11.26□□□□□ -0.61
HMGCL-209ENST00000513148 FAM236AA0A1B0GUQ0 79 aa11.26□□□□□ -0.61
HMGCL-209ENST00000513148 FAM236BA0A1B0GV22 79 aa11.26□□□□□ -0.61
HMGCL-209ENST00000513148 H7C2G1 150 aa11.26□□□□□ -0.61
HMGCL-209ENST00000513148 TIMM17BO60830 172 aa11.25□□□□□ -0.61
HMGCL-209ENST00000513148 CRYGAP11844 174 aa11.25□□□□□ -0.61
HMGCL-209ENST00000513148 TIRAPP58753 221 aa11.25□□□□□ -0.61
HMGCL-209ENST00000513148 C5orf38Q86SI9 138 aa11.25□□□□□ -0.61
HMGCL-209ENST00000513148 LELP1Q5T871 98 aa11.24□□□□□ -0.61
HMGCL-209ENST00000513148 DEFB104AQ8WTQ1 72 aa11.24□□□□□ -0.61
HMGCL-209ENST00000513148 RPL39P62891 51 aaKnown RBP11.23□□□□□ -0.61
HMGCL-209ENST00000513148 HERVK_113P63121 156 aa11.23□□□□□ -0.61
HMGCL-209ENST00000513148 COX7CP15954 63 aa11.23□□□□□ -0.61
HMGCL-209ENST00000513148 NBDYA0A0U1RRE5 68 aa11.22□□□□□ -0.61
HMGCL-209ENST00000513148 MIAQ16674 131 aa11.22□□□□□ -0.61
HMGCL-209ENST00000513148 OR13C6PQ8NH95 151 aa11.22□□□□□ -0.61
HMGCL-209ENST00000513148 DAZ4Q86SG3 579 aaKnown RBP11.21□□□□□ -0.61
HMGCL-209ENST00000513148 DAZ3Q9NR90 486 aaKnown RBP11.21□□□□□ -0.61
HMGCL-209ENST00000513148 KRTAP1-5Q9BYS1 174 aa11.21□□□□□ -0.62
HMGCL-209ENST00000513148 PYGO1Q9Y3Y4 419 aa11.21□□□□□ -0.62
HMGCL-209ENST00000513148 IGHV3-30-3P0DP02 117 aa11.19□□□□□ -0.62
HMGCL-209ENST00000513148 Q6ZR54 194 aa11.19□□□□□ -0.62
HMGCL-209ENST00000513148 DAND5Q8N907 189 aa11.19□□□□□ -0.62
HMGCL-209ENST00000513148 TRBV6-8A0A0A6YYG3 113 aa11.19□□□□□ -0.62
HMGCL-209ENST00000513148 I3L3M4 83 aa11.19□□□□□ -0.62
HMGCL-209ENST00000513148 HIST1H4AP62805 103 aaKnown RBP11.19□□□□□ -0.62
HMGCL-209ENST00000513148 MRPS36P82909 103 aaKnown RBP11.19□□□□□ -0.62
HMGCL-209ENST00000513148 NTM-AS1Q6ZSK4 140 aa11.19□□□□□ -0.62
HMGCL-209ENST00000513148 Q8N3U1 123 aa11.19□□□□□ -0.62
HMGCL-209ENST00000513148 C20orf203Q8NBC4 194 aa11.19□□□□□ -0.62
HMGCL-209ENST00000513148 DNAH6Q9C0G6 4158 aa11.18□□□□□ -0.62
HMGCL-209ENST00000513148 FAM19A5Q7Z5A7 132 aaPredicted RBP11.18□□□□□ -0.62
HMGCL-209ENST00000513148 IGHV1-58A0A0C4DH39 117 aa11.18□□□□□ -0.62
HMGCL-209ENST00000513148 ATOX1O00244 68 aa11.18□□□□□ -0.62
HMGCL-209ENST00000513148 DNAH10OSP0CZ25 163 aa11.18□□□□□ -0.62
HMGCL-209ENST00000513148 TIMM21Q9BVV7 248 aa11.18□□□□□ -0.62
HMGCL-209ENST00000513148 C2orf48Q96LS8 159 aa11.17□□□□□ -0.62
HMGCL-209ENST00000513148 PRSS2P07478 247 aa11.16□□□□□ -0.62
HMGCL-209ENST00000513148 GAGE2AQ6NT46 116 aa11.16□□□□□ -0.62
HMGCL-209ENST00000513148 IGLV4-3A0A075B6K6 122 aa11.15□□□□□ -0.62
HMGCL-209ENST00000513148 TRACP01848 142 aa11.15□□□□□ -0.62
HMGCL-209ENST00000513148 LINC01556Q5JQF7 62 aa11.15□□□□□ -0.62
HMGCL-209ENST00000513148 CLEC2BQ92478 149 aa11.15□□□□□ -0.62
HMGCL-209ENST00000513148 COPS9Q8WXC6 57 aa11.14□□□□□ -0.63
HMGCL-209ENST00000513148 NDUFA12Q9UI09 145 aa11.14□□□□□ -0.63
HMGCL-209ENST00000513148 A0A0J9YXV3 536 aa11.14□□□□□ -0.63
HMGCL-209ENST00000513148 COX7A2LO14548 114 aa11.13□□□□□ -0.63
HMGCL-209ENST00000513148 INAFM2P0DMQ5 153 aa11.13□□□□□ -0.63
HMGCL-209ENST00000513148 TMEM258P61165 79 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms